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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 11:32:52 UTC
Update Date2021-09-26 23:06:20 UTC
HMDB IDHMDB0253234
Secondary Accession NumbersNone
Metabolite Identification
Common NameHycanthone
Descriptionhycanthone, also known as hicantona, belongs to the class of organic compounds known as thiochromenes. These are organosulfur compounds that are analogues to chromene, with the difference that are sulfur atom replaces the oxygen atom. Based on a literature review a significant number of articles have been published on hycanthone. This compound has been identified in human blood as reported by (PMID: 31557052 ). Hycanthone is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Hycanthone is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
1-((2-(Diethylamino)ethyl)amino)-4-(hydroxymethyl)-9H-thioxanthen-9-oneChEBI
1-((2-(Diethylamino)ethyl)amino)-4-(hydroxymethyl)thioxanthen-9-oneChEBI
1-(2-Diethylaminoethylamino)-4-(hydroxymethyl)thioxanthen-9-oneChEBI
HicantonaChEBI
HycanthonChEBI
HycanthonumChEBI
Lucanthone metaboliteChEBI
Chemical FormulaC20H24N2O2S
Average Molecular Weight356.48
Monoisotopic Molecular Weight356.155849195
IUPAC Name1-{[2-(diethylamino)ethyl]amino}-4-(hydroxymethyl)-9H-thioxanthen-9-one
Traditional Namehycanthone
CAS Registry NumberNot Available
SMILES
CCN(CC)CCNC1=C2C(=O)C3=CC=CC=C3SC2=C(CO)C=C1
InChI Identifier
InChI=1S/C20H24N2O2S/c1-3-22(4-2)12-11-21-16-10-9-14(13-23)20-18(16)19(24)15-7-5-6-8-17(15)25-20/h5-10,21,23H,3-4,11-13H2,1-2H3
InChI KeyMFZWMTSUNYWVBU-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as thiochromenes. These are organosulfur compounds that are analogues to chromene, with the difference that are sulfur atom replaces the oxygen atom.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassThiochromenes
Sub ClassNot Available
Direct ParentThiochromenes
Alternative Parents
Substituents
  • Thiochromene
  • 1-benzothiopyran
  • Benzothiopyran
  • Secondary aliphatic/aromatic amine
  • Benzenoid
  • Heteroaromatic compound
  • Vinylogous amide
  • Tertiary amine
  • Tertiary aliphatic amine
  • Secondary amine
  • Alcohol
  • Aromatic alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Organic nitrogen compound
  • Primary alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Amine
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.87ALOGPS
logP3.74ChemAxon
logS-4.3ALOGPS
pKa (Strongest Acidic)14.79ChemAxon
pKa (Strongest Basic)8.67ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area52.57 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity107.79 m³·mol⁻¹ChemAxon
Polarizability40.99 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+187.20330932474
DeepCCS[M-H]-184.84530932474
DeepCCS[M-2H]-218.18730932474
DeepCCS[M+Na]+193.41430932474
AllCCS[M+H]+184.032859911
AllCCS[M+H-H2O]+181.132859911
AllCCS[M+NH4]+186.732859911
AllCCS[M+Na]+187.432859911
AllCCS[M-H]-188.832859911
AllCCS[M+Na-2H]-188.832859911
AllCCS[M+HCOO]-188.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
HycanthoneCCN(CC)CCNC1=C2C(=O)C3=CC=CC=C3SC2=C(CO)C=C14507.6Standard polar33892256
HycanthoneCCN(CC)CCNC1=C2C(=O)C3=CC=CC=C3SC2=C(CO)C=C13348.3Standard non polar33892256
HycanthoneCCN(CC)CCNC1=C2C(=O)C3=CC=CC=C3SC2=C(CO)C=C13518.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Hycanthone,2TMS,isomer #1CCN(CC)CCN(C1=CC=C(CO[Si](C)(C)C)C2=C1C(=O)C1=CC=CC=C1S2)[Si](C)(C)C3092.1Semi standard non polar33892256
Hycanthone,2TMS,isomer #1CCN(CC)CCN(C1=CC=C(CO[Si](C)(C)C)C2=C1C(=O)C1=CC=CC=C1S2)[Si](C)(C)C3034.7Standard non polar33892256
Hycanthone,2TMS,isomer #1CCN(CC)CCN(C1=CC=C(CO[Si](C)(C)C)C2=C1C(=O)C1=CC=CC=C1S2)[Si](C)(C)C3556.5Standard polar33892256
Hycanthone,2TBDMS,isomer #1CCN(CC)CCN(C1=CC=C(CO[Si](C)(C)C(C)(C)C)C2=C1C(=O)C1=CC=CC=C1S2)[Si](C)(C)C(C)(C)C3482.1Semi standard non polar33892256
Hycanthone,2TBDMS,isomer #1CCN(CC)CCN(C1=CC=C(CO[Si](C)(C)C(C)(C)C)C2=C1C(=O)C1=CC=CC=C1S2)[Si](C)(C)C(C)(C)C3384.4Standard non polar33892256
Hycanthone,2TBDMS,isomer #1CCN(CC)CCN(C1=CC=C(CO[Si](C)(C)C(C)(C)C)C2=C1C(=O)C1=CC=CC=C1S2)[Si](C)(C)C(C)(C)C3716.3Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Hycanthone GC-MS (Non-derivatized) - 70eV, Positivesplash10-052r-9055000000-b0669a118e38cea56f5e2021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hycanthone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hycanthone GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hycanthone GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hycanthone GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Hycanthone GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-04Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental LC-MS/MSLC-MS/MS Spectrum - Hycanthone 30V, Positive-QTOFsplash10-0udi-0960000000-a482409b90546359f8122021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Hycanthone 40V, Positive-QTOFsplash10-0udi-0970000000-76e23bee7b84847729db2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Hycanthone 20V, Positive-QTOFsplash10-0zfr-0936000000-e67a22d7d9715db3bcdf2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Hycanthone 10V, Positive-QTOFsplash10-0a4i-0009000000-58fd6505b2bc0f9f852b2021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Hycanthone 50V, Positive-QTOFsplash10-0udi-0790000000-9ab1a7952b49a96360b62021-09-20HMDB team, MONAView Spectrum
Experimental LC-MS/MSLC-MS/MS Spectrum - Hycanthone 50V, Positive-QTOFsplash10-0udi-0790000000-34390e8b5eed7da5656b2021-09-20HMDB team, MONAView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 10V, Positive-QTOFsplash10-052r-0129000000-45d8e4a44ddfe74bf6302016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 20V, Positive-QTOFsplash10-0udi-3794000000-0c2e1d17e3bfd6f19fb12016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 40V, Positive-QTOFsplash10-006x-9380000000-6c7ebe5dcb0fb29a081e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 10V, Negative-QTOFsplash10-0a4i-0009000000-bbf18d2ad611a02de7342016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 20V, Negative-QTOFsplash10-0a70-2039000000-41f8cf65e70e9946924b2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 40V, Negative-QTOFsplash10-05fu-9250000000-fd1a92ce9e10c92c091e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 10V, Positive-QTOFsplash10-0a4i-0009000000-71e41616f8ccbc5e0f442021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 20V, Positive-QTOFsplash10-0pb9-1629000000-7a123226fe559accab302021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 40V, Positive-QTOFsplash10-0fk9-9330000000-b154ebb1de579dbaa41f2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 10V, Negative-QTOFsplash10-0a4i-0009000000-405b5b5ad5d421b9ab892021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 20V, Negative-QTOFsplash10-0a4i-0039000000-377d4a9dd94a1ff860222021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Hycanthone 40V, Negative-QTOFsplash10-00ko-0090000000-16154228d4474bd821842021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID3508
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkHycanthone
METLIN IDNot Available
PubChem Compound3634
PDB IDNot Available
ChEBI ID52768
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]