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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 15:09:26 UTC
Update Date2021-09-26 23:10:22 UTC
HMDB IDHMDB0255509
Secondary Accession NumbersNone
Metabolite Identification
Common NameNemiralisib
DescriptionNemiralisib belongs to the class of organic compounds known as indazoles. Indazoles are compounds containing an indazole, which is structurally characterized by a pyrazole fused to a benzene. Based on a literature review a significant number of articles have been published on Nemiralisib. This compound has been identified in human blood as reported by (PMID: 31557052 ). Nemiralisib is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Nemiralisib is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
6-(1H-indol-4-yl)-4-(5-((4-(1-Methylethyl)-1-piperazinyl)methyl)-1,3-oxazol-2-yl)-1H-indazoleMeSH
Chemical FormulaC26H28N6O
Average Molecular Weight440.551
Monoisotopic Molecular Weight440.232459546
IUPAC Name6-(1H-indol-4-yl)-4-(5-{[4-(propan-2-yl)piperazin-1-yl]methyl}-1,3-oxazol-2-yl)-1H-indazole
Traditional Name6-(1H-indol-4-yl)-4-{5-[(4-isopropylpiperazin-1-yl)methyl]-1,3-oxazol-2-yl}-1H-indazole
CAS Registry NumberNot Available
SMILES
CC(C)N1CCN(CC2=CN=C(O2)C2=C3C=NNC3=CC(=C2)C2=C3C=CNC3=CC=C2)CC1
InChI Identifier
InChI=1S/C26H28N6O/c1-17(2)32-10-8-31(9-11-32)16-19-14-28-26(33-19)22-12-18(13-25-23(22)15-29-30-25)20-4-3-5-24-21(20)6-7-27-24/h3-7,12-15,17,27H,8-11,16H2,1-2H3,(H,29,30)
InChI KeyMCIDWGZGWVSZMK-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as indazoles. Indazoles are compounds containing an indazole, which is structurally characterized by a pyrazole fused to a benzene.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassBenzopyrazoles
Sub ClassIndazoles
Direct ParentIndazoles
Alternative Parents
Substituents
  • Benzopyrazole
  • Indazole
  • Indole
  • Indole or derivatives
  • 2,5-disubstituted 1,3-oxazole
  • N-alkylpiperazine
  • Aralkylamine
  • Benzenoid
  • Piperazine
  • 1,4-diazinane
  • Pyrrole
  • Pyrazole
  • Oxazole
  • Azole
  • Heteroaromatic compound
  • Tertiary aliphatic amine
  • Tertiary amine
  • Oxacycle
  • Azacycle
  • Amine
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organic nitrogen compound
  • Organonitrogen compound
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.79ALOGPS
logP3.49ChemAxon
logS-3.9ALOGPS
pKa (Strongest Acidic)11.32ChemAxon
pKa (Strongest Basic)7.82ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area76.98 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity141.74 m³·mol⁻¹ChemAxon
Polarizability50.15 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+209.25930932474
DeepCCS[M-H]-206.86330932474
DeepCCS[M-2H]-239.76330932474
DeepCCS[M+Na]+215.17130932474

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
NemiralisibCC(C)N1CCN(CC2=CN=C(O2)C2=C3C=NNC3=CC(=C2)C2=C3C=CNC3=CC=C2)CC15079.2Standard polar33892256
NemiralisibCC(C)N1CCN(CC2=CN=C(O2)C2=C3C=NNC3=CC(=C2)C2=C3C=CNC3=CC=C2)CC13989.0Standard non polar33892256
NemiralisibCC(C)N1CCN(CC2=CN=C(O2)C2=C3C=NNC3=CC(=C2)C2=C3C=CNC3=CC=C2)CC14557.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Nemiralisib,1TMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=C[NH]5)=CC4=C3C=NN4[Si](C)(C)C)O2)CC14364.6Semi standard non polar33892256
Nemiralisib,1TMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=C[NH]5)=CC4=C3C=NN4[Si](C)(C)C)O2)CC14204.4Standard non polar33892256
Nemiralisib,1TMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=C[NH]5)=CC4=C3C=NN4[Si](C)(C)C)O2)CC15411.6Standard polar33892256
Nemiralisib,1TMS,isomer #2CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C)=CC4=C3C=N[NH]4)O2)CC14442.3Semi standard non polar33892256
Nemiralisib,1TMS,isomer #2CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C)=CC4=C3C=N[NH]4)O2)CC14293.7Standard non polar33892256
Nemiralisib,1TMS,isomer #2CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C)=CC4=C3C=N[NH]4)O2)CC15330.3Standard polar33892256
Nemiralisib,2TMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C)=CC4=C3C=NN4[Si](C)(C)C)O2)CC14335.8Semi standard non polar33892256
Nemiralisib,2TMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C)=CC4=C3C=NN4[Si](C)(C)C)O2)CC14248.3Standard non polar33892256
Nemiralisib,2TMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C)=CC4=C3C=NN4[Si](C)(C)C)O2)CC15105.8Standard polar33892256
Nemiralisib,1TBDMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=C[NH]5)=CC4=C3C=NN4[Si](C)(C)C(C)(C)C)O2)CC14495.6Semi standard non polar33892256
Nemiralisib,1TBDMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=C[NH]5)=CC4=C3C=NN4[Si](C)(C)C(C)(C)C)O2)CC14409.8Standard non polar33892256
Nemiralisib,1TBDMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=C[NH]5)=CC4=C3C=NN4[Si](C)(C)C(C)(C)C)O2)CC15365.4Standard polar33892256
Nemiralisib,1TBDMS,isomer #2CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C(C)(C)C)=CC4=C3C=N[NH]4)O2)CC14610.5Semi standard non polar33892256
Nemiralisib,1TBDMS,isomer #2CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C(C)(C)C)=CC4=C3C=N[NH]4)O2)CC14486.5Standard non polar33892256
Nemiralisib,1TBDMS,isomer #2CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C(C)(C)C)=CC4=C3C=N[NH]4)O2)CC15356.7Standard polar33892256
Nemiralisib,2TBDMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C(C)(C)C)=CC4=C3C=NN4[Si](C)(C)C(C)(C)C)O2)CC14582.1Semi standard non polar33892256
Nemiralisib,2TBDMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C(C)(C)C)=CC4=C3C=NN4[Si](C)(C)C(C)(C)C)O2)CC14633.5Standard non polar33892256
Nemiralisib,2TBDMS,isomer #1CC(C)N1CCN(CC2=CN=C(C3=CC(C4=CC=CC5=C4C=CN5[Si](C)(C)C(C)(C)C)=CC4=C3C=NN4[Si](C)(C)C(C)(C)C)O2)CC15072.0Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Nemiralisib GC-MS (Non-derivatized) - 70eV, Positivesplash10-01td-5339400000-d81d51f409cb4d70a2092021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Nemiralisib GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID28651123
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound49784002
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]