Record Information |
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Version | 5.0 |
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Status | Detected but not Quantified |
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Creation Date | 2021-09-11 16:31:57 UTC |
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Update Date | 2021-09-26 23:11:42 UTC |
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HMDB ID | HMDB0256208 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | Peldesine |
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Description | Peldesine belongs to the class of organic compounds known as pyrrolopyrimidines. Pyrrolopyrimidines are compounds containing a pyrrolopyrimidine moiety, which consists of a pyrrole ring fused to a pyrimidine. Pyrrole is 5-membered ring consisting of four carbon atoms and one nitrogen atom. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. Based on a literature review very few articles have been published on Peldesine. This compound has been identified in human blood as reported by (PMID: 31557052 ). Peldesine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Peldesine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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Structure | NC1=NC(=O)C2=C(N1)C(CC1=CN=CC=C1)=CN2 InChI=1S/C12H11N5O/c13-12-16-9-8(4-7-2-1-3-14-5-7)6-15-10(9)11(18)17-12/h1-3,5-6,15H,4H2,(H3,13,16,17,18) |
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Synonyms | Value | Source |
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BCX 34 | MeSH | BCX-34 | MeSH | 9-(3-Pyridylmethyl)-7H-9-deazaguanine | MeSH |
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Chemical Formula | C12H11N5O |
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Average Molecular Weight | 241.2486 |
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Monoisotopic Molecular Weight | 241.096359999 |
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IUPAC Name | 2-amino-7-(pyridin-3-ylmethyl)-1H,4H,5H-pyrrolo[3,2-d]pyrimidin-4-one |
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Traditional Name | peldesine |
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CAS Registry Number | Not Available |
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SMILES | NC1=NC(=O)C2=C(N1)C(CC1=CN=CC=C1)=CN2 |
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InChI Identifier | InChI=1S/C12H11N5O/c13-12-16-9-8(4-7-2-1-3-14-5-7)6-15-10(9)11(18)17-12/h1-3,5-6,15H,4H2,(H3,13,16,17,18) |
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InChI Key | DOHVAKFYAHLCJP-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as pyrrolopyrimidines. Pyrrolopyrimidines are compounds containing a pyrrolopyrimidine moiety, which consists of a pyrrole ring fused to a pyrimidine. Pyrrole is 5-membered ring consisting of four carbon atoms and one nitrogen atom. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. |
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Kingdom | Organic compounds |
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Super Class | Organoheterocyclic compounds |
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Class | Pyrrolopyrimidines |
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Sub Class | Not Available |
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Direct Parent | Pyrrolopyrimidines |
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Alternative Parents | |
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Substituents | - Pyrrolopyrimidine
- Aminopyrimidine
- Pyrimidone
- Pyridine
- Pyrimidine
- Substituted pyrrole
- Pyrrole
- Heteroaromatic compound
- Vinylogous amide
- Azacycle
- Amine
- Hydrocarbon derivative
- Organic oxide
- Organopnictogen compound
- Organic oxygen compound
- Primary amine
- Organooxygen compound
- Organonitrogen compound
- Organic nitrogen compound
- Aromatic heteropolycyclic compound
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Molecular Framework | Aromatic heteropolycyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | | Show more...
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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Peldesine,1TMS,isomer #1 | C[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2 | 2647.4 | Semi standard non polar | 33892256 | Peldesine,1TMS,isomer #1 | C[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2 | 2685.2 | Standard non polar | 33892256 | Peldesine,1TMS,isomer #1 | C[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2 | 3688.6 | Standard polar | 33892256 | Peldesine,1TMS,isomer #2 | C[Si](C)(C)N1C(N)=NC(=O)C2=C1C(CC1=CC=CN=C1)=C[NH]2 | 2661.0 | Semi standard non polar | 33892256 | Peldesine,1TMS,isomer #2 | C[Si](C)(C)N1C(N)=NC(=O)C2=C1C(CC1=CC=CN=C1)=C[NH]2 | 2663.7 | Standard non polar | 33892256 | Peldesine,1TMS,isomer #2 | C[Si](C)(C)N1C(N)=NC(=O)C2=C1C(CC1=CC=CN=C1)=C[NH]2 | 3804.2 | Standard polar | 33892256 | Peldesine,1TMS,isomer #3 | C[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)[NH]2 | 2721.2 | Semi standard non polar | 33892256 | Peldesine,1TMS,isomer #3 | C[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)[NH]2 | 2630.6 | Standard non polar | 33892256 | Peldesine,1TMS,isomer #3 | C[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)[NH]2 | 3642.9 | Standard polar | 33892256 | Peldesine,2TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2)[Si](C)(C)C | 2544.9 | Semi standard non polar | 33892256 | Peldesine,2TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2)[Si](C)(C)C | 2754.8 | Standard non polar | 33892256 | Peldesine,2TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2)[Si](C)(C)C | 3481.7 | Standard polar | 33892256 | Peldesine,2TMS,isomer #2 | C[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C | 2686.1 | Semi standard non polar | 33892256 | Peldesine,2TMS,isomer #2 | C[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C | 2610.8 | Standard non polar | 33892256 | Peldesine,2TMS,isomer #2 | C[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C | 3420.2 | Standard polar | 33892256 | Peldesine,2TMS,isomer #3 | C[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C | 2575.1 | Semi standard non polar | 33892256 | Peldesine,2TMS,isomer #3 | C[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C | 2739.5 | Standard non polar | 33892256 | Peldesine,2TMS,isomer #3 | C[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C | 3436.2 | Standard polar | 33892256 | Peldesine,2TMS,isomer #4 | C[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)N2[Si](C)(C)C | 2636.6 | Semi standard non polar | 33892256 | Peldesine,2TMS,isomer #4 | C[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)N2[Si](C)(C)C | 2612.0 | Standard non polar | 33892256 | Peldesine,2TMS,isomer #4 | C[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)N2[Si](C)(C)C | 3570.3 | Standard polar | 33892256 | Peldesine,3TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C)[Si](C)(C)C | 2640.6 | Semi standard non polar | 33892256 | Peldesine,3TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C)[Si](C)(C)C | 2706.5 | Standard non polar | 33892256 | Peldesine,3TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C)[Si](C)(C)C | 3208.6 | Standard polar | 33892256 | Peldesine,3TMS,isomer #2 | C[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C)[Si](C)(C)C | 2597.9 | Semi standard non polar | 33892256 | Peldesine,3TMS,isomer #2 | C[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C)[Si](C)(C)C | 2802.6 | Standard non polar | 33892256 | Peldesine,3TMS,isomer #2 | C[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C)[Si](C)(C)C | 3171.9 | Standard polar | 33892256 | Peldesine,3TMS,isomer #3 | C[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C)N1[Si](C)(C)C | 2635.6 | Semi standard non polar | 33892256 | Peldesine,3TMS,isomer #3 | C[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C)N1[Si](C)(C)C | 2646.7 | Standard non polar | 33892256 | Peldesine,3TMS,isomer #3 | C[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C)N1[Si](C)(C)C | 3251.9 | Standard polar | 33892256 | Peldesine,4TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C)N1[Si](C)(C)C)[Si](C)(C)C | 2693.5 | Semi standard non polar | 33892256 | Peldesine,4TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C)N1[Si](C)(C)C)[Si](C)(C)C | 2768.1 | Standard non polar | 33892256 | Peldesine,4TMS,isomer #1 | C[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C)N1[Si](C)(C)C)[Si](C)(C)C | 3049.1 | Standard polar | 33892256 | Peldesine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2 | 2836.9 | Semi standard non polar | 33892256 | Peldesine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2 | 2873.9 | Standard non polar | 33892256 | Peldesine,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2 | 3740.9 | Standard polar | 33892256 | Peldesine,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N1C(N)=NC(=O)C2=C1C(CC1=CC=CN=C1)=C[NH]2 | 2862.3 | Semi standard non polar | 33892256 | Peldesine,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N1C(N)=NC(=O)C2=C1C(CC1=CC=CN=C1)=C[NH]2 | 2858.5 | Standard non polar | 33892256 | Peldesine,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N1C(N)=NC(=O)C2=C1C(CC1=CC=CN=C1)=C[NH]2 | 3793.9 | Standard polar | 33892256 | Peldesine,1TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)[NH]2 | 2896.3 | Semi standard non polar | 33892256 | Peldesine,1TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)[NH]2 | 2818.7 | Standard non polar | 33892256 | Peldesine,1TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)[NH]2 | 3701.0 | Standard polar | 33892256 | Peldesine,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2)[Si](C)(C)C(C)(C)C | 2926.6 | Semi standard non polar | 33892256 | Peldesine,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2)[Si](C)(C)C(C)(C)C | 3158.0 | Standard non polar | 33892256 | Peldesine,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=C[NH]2)[Si](C)(C)C(C)(C)C | 3520.0 | Standard polar | 33892256 | Peldesine,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C(C)(C)C | 3056.7 | Semi standard non polar | 33892256 | Peldesine,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C(C)(C)C | 3002.4 | Standard non polar | 33892256 | Peldesine,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C(C)(C)C | 3541.0 | Standard polar | 33892256 | Peldesine,2TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C(C)(C)C | 3001.1 | Semi standard non polar | 33892256 | Peldesine,2TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C(C)(C)C | 3130.7 | Standard non polar | 33892256 | Peldesine,2TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C(C)(C)C | 3506.3 | Standard polar | 33892256 | Peldesine,2TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)N2[Si](C)(C)C(C)(C)C | 3074.2 | Semi standard non polar | 33892256 | Peldesine,2TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)N2[Si](C)(C)C(C)(C)C | 3000.9 | Standard non polar | 33892256 | Peldesine,2TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)N1C=C(CC2=CC=CN=C2)C2=C1C(=O)N=C(N)N2[Si](C)(C)C(C)(C)C | 3623.9 | Standard polar | 33892256 | Peldesine,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3212.2 | Semi standard non polar | 33892256 | Peldesine,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3266.4 | Standard non polar | 33892256 | Peldesine,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C([NH]1)C(CC1=CC=CN=C1)=CN2[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3409.6 | Standard polar | 33892256 | Peldesine,3TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3140.4 | Semi standard non polar | 33892256 | Peldesine,3TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3365.9 | Standard non polar | 33892256 | Peldesine,3TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=C[NH]2)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3384.8 | Standard polar | 33892256 | Peldesine,3TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C | 3249.6 | Semi standard non polar | 33892256 | Peldesine,3TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C | 3240.9 | Standard non polar | 33892256 | Peldesine,3TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)NC1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C | 3459.8 | Standard polar | 33892256 | Peldesine,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3436.4 | Semi standard non polar | 33892256 | Peldesine,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3480.6 | Standard non polar | 33892256 | Peldesine,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N(C1=NC(=O)C2=C(C(CC3=CC=CN=C3)=CN2[Si](C)(C)C(C)(C)C)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C | 3340.6 | Standard polar | 33892256 |
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