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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 17:59:48 UTC
Update Date2022-11-23 22:29:19 UTC
HMDB IDHMDB0257215
Secondary Accession NumbersNone
Metabolite Identification
Common NameRibose-5-phosphate
Description[(2,3,4-trihydroxy-5-oxopentyl)oxy]phosphonic acid belongs to the class of organic compounds known as pentose phosphates. These are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups. Based on a literature review very few articles have been published on [(2,3,4-trihydroxy-5-oxopentyl)oxy]phosphonic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). Ribose-5-phosphate is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Ribose-5-phosphate is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
[(2,3,4-Trihydroxy-5-oxopentyl)oxy]phosphonateGenerator
Ribose-5-phosphoric acidGenerator
Chemical FormulaC5H11O8P
Average Molecular Weight230.109
Monoisotopic Molecular Weight230.019154312
IUPAC Name[(2,3,4-trihydroxy-5-oxopentyl)oxy]phosphonic acid
Traditional Nameribose 5-phosphate
CAS Registry NumberNot Available
SMILES
OC(COP(O)(O)=O)C(O)C(O)C=O
InChI Identifier
InChI=1S/C5H11O8P/c6-1-3(7)5(9)4(8)2-13-14(10,11)12/h1,3-5,7-9H,2H2,(H2,10,11,12)
InChI KeyPPQRONHOSHZGFQ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pentose phosphates. These are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentPentose phosphates
Alternative Parents
Substituents
  • Pentose phosphate
  • Monosaccharide phosphate
  • Monoalkyl phosphate
  • Beta-hydroxy aldehyde
  • Organic phosphoric acid derivative
  • Phosphoric acid ester
  • Alkyl phosphate
  • Alpha-hydroxyaldehyde
  • Secondary alcohol
  • Polyol
  • Hydrocarbon derivative
  • Aldehyde
  • Organic oxide
  • Carbonyl group
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.6ALOGPS
logP-3.1ChemAxon
logS-1.1ALOGPS
pKa (Strongest Acidic)1.49ChemAxon
pKa (Strongest Basic)-3.5ChemAxon
Physiological Charge-2ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count5ChemAxon
Polar Surface Area144.52 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity42.26 m³·mol⁻¹ChemAxon
Polarizability18 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+137.79530932474
DeepCCS[M-H]-135.23630932474
DeepCCS[M-2H]-171.02330932474
DeepCCS[M+Na]+146.56230932474
AllCCS[M+H]+149.532859911
AllCCS[M+H-H2O]+146.032859911
AllCCS[M+NH4]+152.732859911
AllCCS[M+Na]+153.632859911
AllCCS[M-H]-140.432859911
AllCCS[M+Na-2H]-141.332859911
AllCCS[M+HCOO]-142.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
ribose-5-phosphateOC(COP(O)(O)=O)C(O)C(O)C=O3422.3Standard polar33892256
ribose-5-phosphateOC(COP(O)(O)=O)C(O)C(O)C=O1663.3Standard non polar33892256
ribose-5-phosphateOC(COP(O)(O)=O)C(O)C(O)C=O2033.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
ribose-5-phosphate,4TMS,isomer #1C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2143.6Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #1C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2033.5Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #1C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2395.5Standard polar33892256
ribose-5-phosphate,4TMS,isomer #10C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2214.5Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #10C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2119.3Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #10C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2476.4Standard polar33892256
ribose-5-phosphate,4TMS,isomer #11C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2189.9Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #11C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2136.1Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #11C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2504.8Standard polar33892256
ribose-5-phosphate,4TMS,isomer #2C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O)O)O[Si](C)(C)C2201.4Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #2C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O)O)O[Si](C)(C)C2111.8Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #2C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O)O)O[Si](C)(C)C2769.0Standard polar33892256
ribose-5-phosphate,4TMS,isomer #3C[Si](C)(C)OC(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C=O2146.0Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #3C[Si](C)(C)OC(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C=O2055.5Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #3C[Si](C)(C)OC(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)C=O2325.2Standard polar33892256
ribose-5-phosphate,4TMS,isomer #4C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2207.0Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #4C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2100.9Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #4C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2633.0Standard polar33892256
ribose-5-phosphate,4TMS,isomer #5C[Si](C)(C)OC(C=O)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2187.7Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #5C[Si](C)(C)OC(C=O)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2073.8Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #5C[Si](C)(C)OC(C=O)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2363.3Standard polar33892256
ribose-5-phosphate,4TMS,isomer #6C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2202.4Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #6C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2116.4Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #6C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2647.5Standard polar33892256
ribose-5-phosphate,4TMS,isomer #7C[Si](C)(C)OC=C(O)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2201.2Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #7C[Si](C)(C)OC=C(O)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2133.2Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #7C[Si](C)(C)OC=C(O)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2510.4Standard polar33892256
ribose-5-phosphate,4TMS,isomer #8C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2135.9Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #8C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2070.2Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #8C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2285.4Standard polar33892256
ribose-5-phosphate,4TMS,isomer #9C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)COP(=O)(O)O[Si](C)(C)C2187.9Semi standard non polar33892256
ribose-5-phosphate,4TMS,isomer #9C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)COP(=O)(O)O[Si](C)(C)C2089.1Standard non polar33892256
ribose-5-phosphate,4TMS,isomer #9C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)COP(=O)(O)O[Si](C)(C)C2579.9Standard polar33892256
ribose-5-phosphate,5TMS,isomer #1C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2135.7Semi standard non polar33892256
ribose-5-phosphate,5TMS,isomer #1C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2092.5Standard non polar33892256
ribose-5-phosphate,5TMS,isomer #1C[Si](C)(C)OC(C=O)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2160.1Standard polar33892256
ribose-5-phosphate,5TMS,isomer #2C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2180.3Semi standard non polar33892256
ribose-5-phosphate,5TMS,isomer #2C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2104.6Standard non polar33892256
ribose-5-phosphate,5TMS,isomer #2C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O)O[Si](C)(C)C)O[Si](C)(C)C2476.1Standard polar33892256
ribose-5-phosphate,5TMS,isomer #3C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2202.0Semi standard non polar33892256
ribose-5-phosphate,5TMS,isomer #3C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2147.6Standard non polar33892256
ribose-5-phosphate,5TMS,isomer #3C[Si](C)(C)OC=C(O)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2395.3Standard polar33892256
ribose-5-phosphate,5TMS,isomer #4C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2203.8Semi standard non polar33892256
ribose-5-phosphate,5TMS,isomer #4C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2151.6Standard non polar33892256
ribose-5-phosphate,5TMS,isomer #4C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2409.3Standard polar33892256
ribose-5-phosphate,5TMS,isomer #5C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2196.6Semi standard non polar33892256
ribose-5-phosphate,5TMS,isomer #5C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2124.5Standard non polar33892256
ribose-5-phosphate,5TMS,isomer #5C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(O)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C2352.0Standard polar33892256
ribose-5-phosphate,6TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2192.2Semi standard non polar33892256
ribose-5-phosphate,6TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2155.5Standard non polar33892256
ribose-5-phosphate,6TMS,isomer #1C[Si](C)(C)OC=C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[Si](C)(C)C2277.1Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2968.0Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2726.7Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2710.5Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #10CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2999.4Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #10CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2788.1Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #10CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2811.5Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #11CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2983.8Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #11CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2775.4Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #11CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2820.5Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O)O[Si](C)(C)C(C)(C)C2947.7Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O)O[Si](C)(C)C(C)(C)C2821.1Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O)O[Si](C)(C)C(C)(C)C2991.3Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C=O2954.5Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C=O2706.8Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)C=O2658.8Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2987.7Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2830.5Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2918.0Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC(C=O)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2988.8Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC(C=O)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2717.1Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC(C=O)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2697.1Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2999.0Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2816.6Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #6CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2912.9Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #7CC(C)(C)[Si](C)(C)OC=C(O)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2979.4Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #7CC(C)(C)[Si](C)(C)OC=C(O)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2808.7Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #7CC(C)(C)[Si](C)(C)OC=C(O)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2837.6Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #8CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2958.9Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #8CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2710.6Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #8CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2634.6Standard polar33892256
ribose-5-phosphate,4TBDMS,isomer #9CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O)O[Si](C)(C)C(C)(C)C2989.5Semi standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #9CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O)O[Si](C)(C)C(C)(C)C2771.6Standard non polar33892256
ribose-5-phosphate,4TBDMS,isomer #9CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O)O[Si](C)(C)C(C)(C)C2857.8Standard polar33892256
ribose-5-phosphate,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3149.2Semi standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2886.8Standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(C=O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2633.6Standard polar33892256
ribose-5-phosphate,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3164.8Semi standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2945.1Standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2846.0Standard polar33892256
ribose-5-phosphate,5TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3161.7Semi standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2959.0Standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC=C(O)C(O[Si](C)(C)C(C)(C)C)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2812.2Standard polar33892256
ribose-5-phosphate,5TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3183.0Semi standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2941.8Standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #4CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O)C(COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2816.3Standard polar33892256
ribose-5-phosphate,5TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3170.9Semi standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2905.1Standard non polar33892256
ribose-5-phosphate,5TBDMS,isomer #5CC(C)(C)[Si](C)(C)OC=C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(O)COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C2772.8Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0002-9100000000-b771da2f9bcb853596152021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_1_4) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_1_5) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_4) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_5) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_6) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_7) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_8) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_9) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_10) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_2_11) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_3) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_4) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_5) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_6) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ribose-5-phosphate GC-MS (TMS_3_7) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-27Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID225
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Only showing the first 10 proteins. There are 26 proteins in total.

Enzymes

General function:
Not Available
Specific function:
Catalyzes the reversible transfer of a two-carbon ketol group from sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate, producing xylulose-5-phosphate and ribose-5-phosphate. Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
Gene Name:
TKT
Uniprot ID:
P9WG25
Molecular weight:
75588.025
General function:
Not Available
Specific function:
Involved in the first step of the non-oxidative branch of the pentose phosphate pathway. It catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
(REFSEQ) RIBOSE-5-PHOSPHATE ISOMERASE
Uniprot ID:
Q8I3W2
Molecular weight:
26204.305
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
Q1JHB8
Molecular weight:
24292.79
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
Q6G3V6
Molecular weight:
25160.975
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
Q6FZP1
Molecular weight:
25255.035
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
Q8DZC6
Molecular weight:
24344.76
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
Q8G3X9
Molecular weight:
25268.505
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
A0Q756
Molecular weight:
24451.995
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
C0M7X6
Molecular weight:
24483.95
General function:
Not Available
Specific function:
Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
Gene Name:
RPIA
Uniprot ID:
C0ME44
Molecular weight:
24514.94

Only showing the first 10 proteins. There are 26 proteins in total.