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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 19:59:22 UTC
Update Date2021-09-26 23:15:20 UTC
HMDB IDHMDB0258433
Secondary Accession NumbersNone
Metabolite Identification
Common NameSpisulosine
Description2-aminooctadecan-3-ol belongs to the class of organic compounds known as 1,2-aminoalcohols. These are organic compounds containing an alkyl chain with an amine group bound to the C1 atom and an alcohol group bound to the C2 atom. Based on a literature review very few articles have been published on 2-aminooctadecan-3-ol. This compound has been identified in human blood as reported by (PMID: 31557052 ). Spisulosine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Spisulosine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
1-DeoxysphinganineMeSH
DoxSA CPDMeSH
Chemical FormulaC18H39NO
Average Molecular Weight285.516
Monoisotopic Molecular Weight285.30316488
IUPAC Name2-aminooctadecan-3-ol
Traditional Name2-aminooctadecan-3-ol
CAS Registry NumberNot Available
SMILES
CCCCCCCCCCCCCCCC(O)C(C)N
InChI Identifier
InChI=1S/C18H39NO/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-16-18(20)17(2)19/h17-18,20H,3-16,19H2,1-2H3
InChI KeyYRYJJIXWWQLGGV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 1,2-aminoalcohols. These are organic compounds containing an alkyl chain with an amine group bound to the C1 atom and an alcohol group bound to the C2 atom.
KingdomOrganic compounds
Super ClassOrganic nitrogen compounds
ClassOrganonitrogen compounds
Sub ClassAmines
Direct Parent1,2-aminoalcohols
Alternative Parents
Substituents
  • Secondary alcohol
  • 1,2-aminoalcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary amine
  • Organooxygen compound
  • Primary aliphatic amine
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP6.33ALOGPS
logP5.82ChemAxon
logS-6ALOGPS
pKa (Strongest Acidic)14.62ChemAxon
pKa (Strongest Basic)9.83ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area46.25 ŲChemAxon
Rotatable Bond Count15ChemAxon
Refractivity89.39 m³·mol⁻¹ChemAxon
Polarizability39.5 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+177.90430932474
DeepCCS[M-H]-174.2430932474
DeepCCS[M-2H]-211.00830932474
DeepCCS[M+Na]+186.86730932474
AllCCS[M+H]+186.632859911
AllCCS[M+H-H2O]+183.732859911
AllCCS[M+NH4]+189.332859911
AllCCS[M+Na]+190.132859911
AllCCS[M-H]-179.732859911
AllCCS[M+Na-2H]-180.932859911
AllCCS[M+HCOO]-182.432859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
SpisulosineCCCCCCCCCCCCCCCC(O)C(C)N2717.8Standard polar33892256
SpisulosineCCCCCCCCCCCCCCCC(O)C(C)N2188.9Standard non polar33892256
SpisulosineCCCCCCCCCCCCCCCC(O)C(C)N2231.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Spisulosine,2TMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C)C(C)N[Si](C)(C)C2354.1Semi standard non polar33892256
Spisulosine,2TMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C)C(C)N[Si](C)(C)C2405.8Standard non polar33892256
Spisulosine,2TMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C)C(C)N[Si](C)(C)C2297.5Standard polar33892256
Spisulosine,2TMS,isomer #2CCCCCCCCCCCCCCCC(O)C(C)N([Si](C)(C)C)[Si](C)(C)C2524.9Semi standard non polar33892256
Spisulosine,2TMS,isomer #2CCCCCCCCCCCCCCCC(O)C(C)N([Si](C)(C)C)[Si](C)(C)C2518.3Standard non polar33892256
Spisulosine,2TMS,isomer #2CCCCCCCCCCCCCCCC(O)C(C)N([Si](C)(C)C)[Si](C)(C)C2562.5Standard polar33892256
Spisulosine,3TMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C)C(C)N([Si](C)(C)C)[Si](C)(C)C2603.4Semi standard non polar33892256
Spisulosine,3TMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C)C(C)N([Si](C)(C)C)[Si](C)(C)C2532.6Standard non polar33892256
Spisulosine,3TMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C)C(C)N([Si](C)(C)C)[Si](C)(C)C2302.7Standard polar33892256
Spisulosine,2TBDMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C(C)(C)C)C(C)N[Si](C)(C)C(C)(C)C2767.0Semi standard non polar33892256
Spisulosine,2TBDMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C(C)(C)C)C(C)N[Si](C)(C)C(C)(C)C2744.4Standard non polar33892256
Spisulosine,2TBDMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C(C)(C)C)C(C)N[Si](C)(C)C(C)(C)C2566.4Standard polar33892256
Spisulosine,2TBDMS,isomer #2CCCCCCCCCCCCCCCC(O)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2961.4Semi standard non polar33892256
Spisulosine,2TBDMS,isomer #2CCCCCCCCCCCCCCCC(O)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2820.3Standard non polar33892256
Spisulosine,2TBDMS,isomer #2CCCCCCCCCCCCCCCC(O)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2732.8Standard polar33892256
Spisulosine,3TBDMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C(C)(C)C)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3210.2Semi standard non polar33892256
Spisulosine,3TBDMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C(C)(C)C)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3047.2Standard non polar33892256
Spisulosine,3TBDMS,isomer #1CCCCCCCCCCCCCCCC(O[Si](C)(C)C(C)(C)C)C(C)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C2627.0Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Spisulosine GC-MS (Non-derivatized) - 70eV, Positivesplash10-0006-9110000000-5b614a23029608f270d22021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Spisulosine GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Spisulosine GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Spisulosine GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Spisulosine GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Spisulosine GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10636494
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21888542
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]