Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-11 21:43:53 UTC
Update Date2021-09-26 23:16:39 UTC
HMDB IDHMDB0259234
Secondary Accession NumbersNone
Metabolite Identification
Common NameTrimesic acid
DescriptionTrimesic acid, also known as trimesinate, belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups. Based on a literature review a small amount of articles have been published on Trimesic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). Trimesic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically Trimesic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
1,3,5-BENZENETRICARBOXYLIC ACIDChEBI
1,3,5-TricarboxybenzeneChEBI
5-Carboxyisophthalic acidChEBI
Trimesinic acidChEBI
Trimesitinic acidChEBI
1,3,5-BENZENETRICARBOXYLateGenerator
5-CarboxyisophthalateGenerator
TrimesinateGenerator
TrimesitinateGenerator
TrimesateGenerator
Trimesic acidChEBI
Benzene-1,3,5-carboxylic acidMeSH
Trimesic acid, trisodium saltMeSH
Trimesic acid, monosodium saltMeSH
Benzene-1,3,5-tricarboxylateGenerator
Chemical FormulaC9H6O6
Average Molecular Weight210.1403
Monoisotopic Molecular Weight210.016437924
IUPAC Namebenzene-1,3,5-tricarboxylic acid
Traditional Nametrimesic acid
CAS Registry NumberNot Available
SMILES
OC(=O)C1=CC(=CC(=C1)C(O)=O)C(O)=O
InChI Identifier
InChI=1S/C9H6O6/c10-7(11)4-1-5(8(12)13)3-6(2-4)9(14)15/h1-3H,(H,10,11)(H,12,13)(H,14,15)
InChI KeyQMKYBPDZANOJGF-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as tricarboxylic acids and derivatives. These are carboxylic acids containing exactly three carboxyl groups.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassTricarboxylic acids and derivatives
Direct ParentTricarboxylic acids and derivatives
Alternative Parents
Substituents
  • Tricarboxylic acid or derivatives
  • Benzoic acid
  • Benzoic acid or derivatives
  • Benzoyl
  • Benzenoid
  • Monocyclic benzene moiety
  • Carboxylic acid
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP0.87ALOGPS
logP0.95ChemAxon
logS-2.4ALOGPS
pKa (Strongest Acidic)3.14ChemAxon
Physiological Charge-3ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area111.9 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity47.83 m³·mol⁻¹ChemAxon
Polarizability18.34 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+141.54730932474
DeepCCS[M-H]-139.15130932474
DeepCCS[M-2H]-173.20730932474
DeepCCS[M+Na]+147.80230932474
AllCCS[M+H]+144.132859911
AllCCS[M+H-H2O]+140.132859911
AllCCS[M+NH4]+147.832859911
AllCCS[M+Na]+148.932859911
AllCCS[M-H]-138.132859911
AllCCS[M+Na-2H]-138.432859911
AllCCS[M+HCOO]-138.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Trimesic acidOC(=O)C1=CC(=CC(=C1)C(O)=O)C(O)=O3270.4Standard polar33892256
Trimesic acidOC(=O)C1=CC(=CC(=C1)C(O)=O)C(O)=O1545.9Standard non polar33892256
Trimesic acidOC(=O)C1=CC(=CC(=C1)C(O)=O)C(O)=O1984.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Experimental GC-MSGC-MS Spectrum - Trimesic acid EI-B (Non-derivatized)splash10-0296-9420000000-71690f781c3736b430e72017-09-12HMDB team, MONA, MassBankView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0296-1950000000-16acb81886805b0d29e82021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (TMS_2_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Trimesic acid GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-11-05Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Trimesic acid 10V, Positive-QTOFsplash10-03di-0090000000-e69f5a08aec4662802802016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Trimesic acid 20V, Positive-QTOFsplash10-03di-0290000000-61ead8bedfa3fd324b3f2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Trimesic acid 40V, Positive-QTOFsplash10-0300-0920000000-181f855491571bc037d32016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Trimesic acid 10V, Negative-QTOFsplash10-0a4i-0390000000-67e7c3107c2781ba75bb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Trimesic acid 20V, Negative-QTOFsplash10-066r-0950000000-0fa5e505a5f1c9ee93962016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Trimesic acid 40V, Negative-QTOFsplash10-00xr-2910000000-80dd70648c298af7eb812016-08-03Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDDB08632
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDC00053333
Chemspider ID10665
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkTrimesic_acid
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID46032
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]