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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2021-09-23 19:43:18 UTC

Update Date

2021-09-23 19:43:18 UTC

HMDB ID

HMDB0302682

Secondary Accession Numbers

None

Metabolite Identification

Common Name

Isorhamnetin 3-beta-D-glucoside

Description

Isorhamnetin 3-beta-d-glucoside, also known as isorhamnetin-3-glu, is a member of the class of compounds known as flavonoid-3-o-glycosides. Flavonoid-3-o-glycosides are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C3-position. Isorhamnetin 3-beta-d-glucoside is slightly soluble (in water) and a very weakly acidic compound (based on its pKa). Isorhamnetin 3-beta-d-glucoside can be synthesized from beta-D-glucose. Isorhamnetin 3-beta-d-glucoside can also be synthesized into isorhamnetin. Isorhamnetin 3-beta-d-glucoside can be found in sea-buckthornberry, which makes isorhamnetin 3-beta-d-glucoside a potential biomarker for the consumption of this food product. Isorhamnetin 3-beta-d-glucoside may be a unique S.cerevisiae (yeast) metabolite.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

  Mrv0541 02241221432D          

 34 37  0  0  1  0            999 V2000
    0.0000   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  3  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 16 20  1  0  0  0  0
 14 21  1  0  0  0  0
 10 22  1  0  0  0  0
 23 22  1  1  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 23 28  1  0  0  0  0
 27 29  1  1  0  0  0
 29 30  1  0  0  0  0
 26 31  1  6  0  0  0
 25 32  1  1  0  0  0
 24 33  1  6  0  0  0
  4 34  1  0  0  0  0
M  END

HMDB0302682
     RDKit          3D
Isorhamnetin 3-beta-D-glucoside
 56 59  0  0  0  0  0  0  0  0999 V2000
   -1.8697   -3.9997   -1.7898 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0740   -3.5118   -1.2604 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2402   -2.1807   -0.9138 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2516   -1.2221   -1.0514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4293    0.0798   -0.7080 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4620    1.1551   -0.7809 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8947    2.4309   -0.6975 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0898    3.4511   -0.7633 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5902    4.7465   -0.6717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7539    5.8378   -0.7394 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2524    7.1355   -0.6477 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5909    5.6803   -0.8985 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1466    4.4006   -0.9960 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4801    4.3032   -1.1524 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2834    3.3254   -0.9245 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7811    2.0594   -1.0126 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9978    1.7711   -1.1600 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1407    0.9850   -0.9323 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4461   -0.2738   -1.0056 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0336   -0.7298    0.2174 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4472   -0.6796    0.0244 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0139   -0.9096    1.2704 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4801   -0.5355    1.3024 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1541   -1.3124    0.3507 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9248   -2.4227    1.4670 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5855   -2.7919    2.6278 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4905   -2.8026    1.5626 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3945   -4.1673    1.2216 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5418   -2.0391    0.6851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5719   -1.7607    1.5393 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6925    0.4274   -0.1932 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7093   -0.4715   -0.0331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4778   -1.7726   -0.3944 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4665   -2.7359   -0.2575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0871   -4.8666   -2.4889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2141   -4.4498   -1.0166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3778   -3.2442   -2.4264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3012   -1.5041   -1.4669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6562    4.8834   -0.5456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5466    7.6664   -1.4710 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2716    6.5118   -0.9554 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0641    3.5512   -1.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8860    0.0189    1.0514 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4328   -0.4278    2.0711 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6216    0.5552    1.1363 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9125   -0.7994    2.2878 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6205   -2.0798    0.7728 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4132   -2.8640    0.5521 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5914   -2.0883    3.3177 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2159   -2.7591    2.6520 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4629   -4.7484    2.0150 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1665   -2.7152   -0.1097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3726   -0.8907    2.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8906    1.4455    0.0961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6644   -0.1853    0.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3736   -2.4791    0.1140 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 10 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 22 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
  5 31  2  0
 31 32  1  0
 32 33  2  0
 33 34  1  0
 33  3  1  0
 18  6  2  0
 29 20  1  0
 15  8  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  4 38  1  0
  9 39  1  0
 11 40  1  0
 12 41  1  0
 14 42  1  0
 20 43  1  1
 22 44  1  1
 23 45  1  0
 23 46  1  0
 24 47  1  0
 25 48  1  6
 26 49  1  0
 27 50  1  1
 28 51  1  0
 29 52  1  6
 30 53  1  0
 31 54  1  0
 32 55  1  0
 34 56  1  0
M  END

  Mrv0541 02241221432D          

 34 37  0  0  1  0            999 V2000
    0.0000   -4.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -3.7125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -2.8875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5724   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579   -1.6500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2868   -1.6500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.8579    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7145    1.2375    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.7145    2.0625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434    2.0625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    3.3000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4289    0.8250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1434   -2.8875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0  0  0  0
  2  3  1  0  0  0  0
  3  4  2  0  0  0  0
  4  5  1  0  0  0  0
  5  6  2  0  0  0  0
  6  7  1  0  0  0  0
  7  8  2  0  0  0  0
  3  8  1  0  0  0  0
  7  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
 11 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  2  0  0  0  0
 16 17  1  0  0  0  0
 17 18  2  0  0  0  0
 13 18  1  0  0  0  0
 18 19  1  0  0  0  0
  9 19  1  0  0  0  0
 16 20  1  0  0  0  0
 14 21  1  0  0  0  0
 10 22  1  0  0  0  0
 23 22  1  1  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 23 28  1  0  0  0  0
 27 29  1  1  0  0  0
 29 30  1  0  0  0  0
 26 31  1  6  0  0  0
 25 32  1  1  0  0  0
 24 33  1  6  0  0  0
  4 34  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0302682

> <DATABASE_NAME>
hmdb

> <SMILES>
COC1=C(O)C=CC(=C1)C1=C(O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C(=O)C2=C(O)C=C(O)C=C2O1

> <INCHI_IDENTIFIER>
InChI=1S/C22H22O12/c1-31-12-4-8(2-3-10(12)25)20-21(17(28)15-11(26)5-9(24)6-13(15)32-20)34-22-19(30)18(29)16(27)14(7-23)33-22/h2-6,14,16,18-19,22-27,29-30H,7H2,1H3/t14-,16-,18+,19-,22+/m1/s1

> <INCHI_KEY>
CQLRUIIRRZYHHS-LFXZADKFSA-N

> <FORMULA>
C22H22O12

> <MOLECULAR_WEIGHT>
478.4029

> <EXACT_MASS>
478.111126168

> <JCHEM_ACCEPTOR_COUNT>
12

> <JCHEM_AVERAGE_POLARIZABILITY>
45.39912475449547

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
7

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
1

> <JCHEM_IUPAC>
5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-chromen-4-one

> <ALOGPS_LOGP>
0.64

> <JCHEM_LOGP>
0.0010587600000000752

> <ALOGPS_LOGS>
-2.59

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA>
8.762916979307633

> <JCHEM_PKA_STRONGEST_ACIDIC>
6.436132811472945

> <JCHEM_PKA_STRONGEST_BASIC>
-2.98109237118166

> <JCHEM_POLAR_SURFACE_AREA>
195.6

> <JCHEM_REFRACTIVITY>
113.75779999999996

> <JCHEM_ROTATABLE_BOND_COUNT>
5

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
1.22e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0302682
     RDKit          3D
Isorhamnetin 3-beta-D-glucoside
 56 59  0  0  0  0  0  0  0  0999 V2000
   -1.8697   -3.9997   -1.7898 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0740   -3.5118   -1.2604 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2402   -2.1807   -0.9138 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2516   -1.2221   -1.0514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4293    0.0798   -0.7080 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4620    1.1551   -0.7809 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8947    2.4309   -0.6975 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0898    3.4511   -0.7633 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5902    4.7465   -0.6717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7539    5.8378   -0.7394 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2524    7.1355   -0.6477 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5909    5.6803   -0.8985 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1466    4.4006   -0.9960 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4801    4.3032   -1.1524 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2834    3.3254   -0.9245 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7811    2.0594   -1.0126 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9978    1.7711   -1.1600 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1407    0.9850   -0.9323 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4461   -0.2738   -1.0056 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0336   -0.7298    0.2174 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4472   -0.6796    0.0244 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0139   -0.9096    1.2704 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4801   -0.5355    1.3024 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1541   -1.3124    0.3507 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9248   -2.4227    1.4670 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5855   -2.7919    2.6278 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4905   -2.8026    1.5626 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3945   -4.1673    1.2216 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5418   -2.0391    0.6851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5719   -1.7607    1.5393 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6925    0.4274   -0.1932 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7093   -0.4715   -0.0331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4778   -1.7726   -0.3944 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4665   -2.7359   -0.2575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0871   -4.8666   -2.4889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2141   -4.4498   -1.0166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3778   -3.2442   -2.4264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3012   -1.5041   -1.4669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6562    4.8834   -0.5456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5466    7.6664   -1.4710 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2716    6.5118   -0.9554 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0641    3.5512   -1.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8860    0.0189    1.0514 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4328   -0.4278    2.0711 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6216    0.5552    1.1363 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9125   -0.7994    2.2878 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6205   -2.0798    0.7728 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4132   -2.8640    0.5521 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5914   -2.0883    3.3177 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2159   -2.7591    2.6520 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4629   -4.7484    2.0150 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1665   -2.7152   -0.1097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3726   -0.8907    2.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8906    1.4455    0.0961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6644   -0.1853    0.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3736   -2.4791    0.1140 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 10 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 22 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
  5 31  2  0
 31 32  1  0
 32 33  2  0
 33 34  1  0
 33  3  1  0
 18  6  2  0
 29 20  1  0
 15  8  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  4 38  1  0
  9 39  1  0
 11 40  1  0
 12 41  1  0
 14 42  1  0
 20 43  1  1
 22 44  1  1
 23 45  1  0
 23 46  1  0
 24 47  1  0
 25 48  1  6
 26 49  1  0
 27 50  1  1
 28 51  1  0
 29 52  1  6
 30 53  1  0
 31 54  1  0
 32 55  1  0
 34 56  1  0
M  END

HEADER    PROTEIN                                 24-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-FEB-12         0                                  
HETATM    1  C   UNK     0       0.000  -7.700   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      -1.334  -6.930   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      -1.334  -5.390   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      -2.667  -4.620   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      -2.667  -3.080   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -1.334  -2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       0.000  -3.080   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0       0.000  -4.620   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.334  -2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM   12  O   UNK     0       2.667   1.540   0.000  0.00  0.00           O+0
HETATM   13  C   UNK     0       4.001  -0.770   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.335   0.000   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       6.668  -0.770   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       6.668  -2.310   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       5.335  -3.080   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0       4.001  -2.310   0.000  0.00  0.00           C+0
HETATM   19  O   UNK     0       2.667  -3.080   0.000  0.00  0.00           O+0
HETATM   20  O   UNK     0       8.002  -3.080   0.000  0.00  0.00           O+0
HETATM   21  O   UNK     0       5.335   1.540   0.000  0.00  0.00           O+0
HETATM   22  O   UNK     0       0.000   0.000   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      -1.334   2.310   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      -1.334   3.850   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.000   4.620   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       1.334   2.310   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       2.667   4.620   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       4.001   3.850   0.000  0.00  0.00           O+0
HETATM   31  O   UNK     0       0.000   6.160   0.000  0.00  0.00           O+0
HETATM   32  O   UNK     0      -2.667   4.620   0.000  0.00  0.00           O+0
HETATM   33  O   UNK     0      -2.667   1.540   0.000  0.00  0.00           O+0
HETATM   34  O   UNK     0      -4.001  -5.390   0.000  0.00  0.00           O+0
CONECT    1    2                                                            
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5   34                                                  
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9                                                  
CONECT    8    7    3                                                       
CONECT    9    7   10   19                                                  
CONECT   10    9   11   22                                                  
CONECT   11   10   12   13                                                  
CONECT   12   11                                                            
CONECT   13   11   14   18                                                  
CONECT   14   13   15   21                                                  
CONECT   15   14   16                                                       
CONECT   16   15   17   20                                                  
CONECT   17   16   18                                                       
CONECT   18   17   13   19                                                  
CONECT   19   18    9                                                       
CONECT   20   16                                                            
CONECT   21   14                                                            
CONECT   22   10   23                                                       
CONECT   23   22   24   28                                                  
CONECT   24   23   25   33                                                  
CONECT   25   24   26   32                                                  
CONECT   26   25   27   31                                                  
CONECT   27   26   28   29                                                  
CONECT   28   27   23                                                       
CONECT   29   27   30                                                       
CONECT   30   29                                                            
CONECT   31   26                                                            
CONECT   32   25                                                            
CONECT   33   24                                                            
CONECT   34    4                                                            
MASTER        0    0    0    0    0    0    0    0   34    0   74    0
END

COMPND    HMDB0302682
HETATM    1  C1  UNL     1      -1.870  -4.000  -1.790  1.00  0.00           C  
HETATM    2  O1  UNL     1      -3.074  -3.512  -1.260  1.00  0.00           O  
HETATM    3  C2  UNL     1      -3.240  -2.181  -0.914  1.00  0.00           C  
HETATM    4  C3  UNL     1      -2.252  -1.222  -1.051  1.00  0.00           C  
HETATM    5  C4  UNL     1      -2.429   0.080  -0.708  1.00  0.00           C  
HETATM    6  C5  UNL     1      -1.462   1.155  -0.781  1.00  0.00           C  
HETATM    7  O2  UNL     1      -1.895   2.431  -0.697  1.00  0.00           O  
HETATM    8  C6  UNL     1      -1.090   3.451  -0.763  1.00  0.00           C  
HETATM    9  C7  UNL     1      -1.590   4.746  -0.672  1.00  0.00           C  
HETATM   10  C8  UNL     1      -0.754   5.838  -0.739  1.00  0.00           C  
HETATM   11  O3  UNL     1      -1.252   7.136  -0.648  1.00  0.00           O  
HETATM   12  C9  UNL     1       0.591   5.680  -0.898  1.00  0.00           C  
HETATM   13  C10 UNL     1       1.147   4.401  -0.996  1.00  0.00           C  
HETATM   14  O4  UNL     1       2.480   4.303  -1.152  1.00  0.00           O  
HETATM   15  C11 UNL     1       0.283   3.325  -0.925  1.00  0.00           C  
HETATM   16  C12 UNL     1       0.781   2.059  -1.013  1.00  0.00           C  
HETATM   17  O5  UNL     1       1.998   1.771  -1.160  1.00  0.00           O  
HETATM   18  C13 UNL     1      -0.141   0.985  -0.932  1.00  0.00           C  
HETATM   19  O6  UNL     1       0.446  -0.274  -1.006  1.00  0.00           O  
HETATM   20  C14 UNL     1       1.034  -0.730   0.217  1.00  0.00           C  
HETATM   21  O7  UNL     1       2.447  -0.680   0.024  1.00  0.00           O  
HETATM   22  C15 UNL     1       3.014  -0.910   1.270  1.00  0.00           C  
HETATM   23  C16 UNL     1       4.480  -0.536   1.302  1.00  0.00           C  
HETATM   24  O8  UNL     1       5.154  -1.312   0.351  1.00  0.00           O  
HETATM   25  C17 UNL     1       2.925  -2.423   1.467  1.00  0.00           C  
HETATM   26  O9  UNL     1       3.585  -2.792   2.628  1.00  0.00           O  
HETATM   27  C18 UNL     1       1.491  -2.803   1.563  1.00  0.00           C  
HETATM   28  O10 UNL     1       1.395  -4.167   1.222  1.00  0.00           O  
HETATM   29  C19 UNL     1       0.542  -2.039   0.685  1.00  0.00           C  
HETATM   30  O11 UNL     1      -0.572  -1.761   1.539  1.00  0.00           O  
HETATM   31  C20 UNL     1      -3.693   0.427  -0.193  1.00  0.00           C  
HETATM   32  C21 UNL     1      -4.709  -0.472  -0.033  1.00  0.00           C  
HETATM   33  C22 UNL     1      -4.478  -1.773  -0.394  1.00  0.00           C  
HETATM   34  O12 UNL     1      -5.467  -2.736  -0.258  1.00  0.00           O  
HETATM   35  H1  UNL     1      -2.087  -4.867  -2.489  1.00  0.00           H  
HETATM   36  H2  UNL     1      -1.214  -4.450  -1.017  1.00  0.00           H  
HETATM   37  H3  UNL     1      -1.378  -3.244  -2.426  1.00  0.00           H  
HETATM   38  H4  UNL     1      -1.301  -1.504  -1.467  1.00  0.00           H  
HETATM   39  H5  UNL     1      -2.656   4.883  -0.546  1.00  0.00           H  
HETATM   40  H6  UNL     1      -1.547   7.666  -1.471  1.00  0.00           H  
HETATM   41  H7  UNL     1       1.272   6.512  -0.955  1.00  0.00           H  
HETATM   42  H8  UNL     1       3.064   3.551  -1.239  1.00  0.00           H  
HETATM   43  H9  UNL     1       0.886   0.019   1.051  1.00  0.00           H  
HETATM   44  H10 UNL     1       2.433  -0.428   2.071  1.00  0.00           H  
HETATM   45  H11 UNL     1       4.622   0.555   1.136  1.00  0.00           H  
HETATM   46  H12 UNL     1       4.912  -0.799   2.288  1.00  0.00           H  
HETATM   47  H13 UNL     1       5.620  -2.080   0.773  1.00  0.00           H  
HETATM   48  H14 UNL     1       3.413  -2.864   0.552  1.00  0.00           H  
HETATM   49  H15 UNL     1       3.591  -2.088   3.318  1.00  0.00           H  
HETATM   50  H16 UNL     1       1.216  -2.759   2.652  1.00  0.00           H  
HETATM   51  H17 UNL     1       1.463  -4.748   2.015  1.00  0.00           H  
HETATM   52  H18 UNL     1       0.166  -2.715  -0.110  1.00  0.00           H  
HETATM   53  H19 UNL     1      -0.373  -0.891   2.008  1.00  0.00           H  
HETATM   54  H20 UNL     1      -3.891   1.445   0.096  1.00  0.00           H  
HETATM   55  H21 UNL     1      -5.664  -0.185   0.361  1.00  0.00           H  
HETATM   56  H22 UNL     1      -6.374  -2.479   0.114  1.00  0.00           H  
CONECT    1    2   35   36   37
CONECT    2    3
CONECT    3    4    4   33
CONECT    4    5   38
CONECT    5    6   31   31
CONECT    6    7   18   18
CONECT    7    8
CONECT    8    9    9   15
CONECT    9   10   39
CONECT   10   11   12   12
CONECT   11   40
CONECT   12   13   41
CONECT   13   14   15   15
CONECT   14   42
CONECT   15   16
CONECT   16   17   17   18
CONECT   18   19
CONECT   19   20
CONECT   20   21   29   43
CONECT   21   22
CONECT   22   23   25   44
CONECT   23   24   45   46
CONECT   24   47
CONECT   25   26   27   48
CONECT   26   49
CONECT   27   28   29   50
CONECT   28   51
CONECT   29   30   52
CONECT   30   53
CONECT   31   32   54
CONECT   32   33   33   55
CONECT   33   34
CONECT   34   56
END

HMDB0302682
     RDKit          3D
Isorhamnetin 3-beta-D-glucoside
 56 59  0  0  0  0  0  0  0  0999 V2000
   -1.8697   -3.9997   -1.7898 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0740   -3.5118   -1.2604 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2402   -2.1807   -0.9138 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2516   -1.2221   -1.0514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4293    0.0798   -0.7080 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4620    1.1551   -0.7809 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8947    2.4309   -0.6975 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0898    3.4511   -0.7633 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5902    4.7465   -0.6717 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7539    5.8378   -0.7394 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2524    7.1355   -0.6477 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5909    5.6803   -0.8985 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1466    4.4006   -0.9960 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4801    4.3032   -1.1524 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2834    3.3254   -0.9245 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7811    2.0594   -1.0126 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9978    1.7711   -1.1600 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1407    0.9850   -0.9323 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4461   -0.2738   -1.0056 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.0336   -0.7298    0.2174 C   0  0  2  0  0  0  0  0  0  0  0  0
    2.4472   -0.6796    0.0244 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.0139   -0.9096    1.2704 C   0  0  2  0  0  0  0  0  0  0  0  0
    4.4801   -0.5355    1.3024 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1541   -1.3124    0.3507 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9248   -2.4227    1.4670 C   0  0  1  0  0  0  0  0  0  0  0  0
    3.5855   -2.7919    2.6278 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4905   -2.8026    1.5626 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.3945   -4.1673    1.2216 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5418   -2.0391    0.6851 C   0  0  1  0  0  0  0  0  0  0  0  0
   -0.5719   -1.7607    1.5393 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6925    0.4274   -0.1932 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7093   -0.4715   -0.0331 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4778   -1.7726   -0.3944 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4665   -2.7359   -0.2575 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0871   -4.8666   -2.4889 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2141   -4.4498   -1.0166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3778   -3.2442   -2.4264 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3012   -1.5041   -1.4669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6562    4.8834   -0.5456 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5466    7.6664   -1.4710 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2716    6.5118   -0.9554 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0641    3.5512   -1.2394 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8860    0.0189    1.0514 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4328   -0.4278    2.0711 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6216    0.5552    1.1363 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9125   -0.7994    2.2878 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6205   -2.0798    0.7728 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4132   -2.8640    0.5521 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5914   -2.0883    3.3177 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.2159   -2.7591    2.6520 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4629   -4.7484    2.0150 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1665   -2.7152   -0.1097 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3726   -0.8907    2.0077 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8906    1.4455    0.0961 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6644   -0.1853    0.3611 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3736   -2.4791    0.1140 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  2  0
  9 10  1  0
 10 11  1  0
 10 12  2  0
 12 13  1  0
 13 14  1  0
 13 15  2  0
 15 16  1  0
 16 17  2  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 22 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 27 29  1  0
 29 30  1  0
  5 31  2  0
 31 32  1  0
 32 33  2  0
 33 34  1  0
 33  3  1  0
 18  6  2  0
 29 20  1  0
 15  8  1  0
  1 35  1  0
  1 36  1  0
  1 37  1  0
  4 38  1  0
  9 39  1  0
 11 40  1  0
 12 41  1  0
 14 42  1  0
 20 43  1  1
 22 44  1  1
 23 45  1  0
 23 46  1  0
 24 47  1  0
 25 48  1  6
 26 49  1  0
 27 50  1  1
 28 51  1  0
 29 52  1  6
 30 53  1  0
 31 54  1  0
 32 55  1  0
 34 56  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
Isorhamnetin-3-oglucoside	ChEMBL
Isorhamnetin 3-glucoside	ChEMBL
Isorhamnetin 3-O-beta-D-glucopyranoside	MeSH
Isorhamnetin-3-glu	MeSH
Isorhamnetin 3-b-D-glucoside	Generator
Isorhamnetin 3-β-D-glucoside	Generator
Isorhamnetin 3-O-glucoside	MeSH

Chemical Formula

C₂₂H₂₂O₁₂

Average Molecular Weight

478.4029

Monoisotopic Molecular Weight

478.111126168

IUPAC Name

5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4H-chromen-4-one

Traditional Name

5,7-dihydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-{[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}chromen-4-one

CAS Registry Number

Not Available

SMILES

COC1=C(O)C=CC(=C1)C1=C(O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)C(=O)C2=C(O)C=C(O)C=C2O1

InChI Identifier

InChI=1S/C22H22O12/c1-31-12-4-8(2-3-10(12)25)20-21(17(28)15-11(26)5-9(24)6-13(15)32-20)34-22-19(30)18(29)16(27)14(7-23)33-22/h2-6,14,16,18-19,22-27,29-30H,7H2,1H3/t14-,16-,18+,19-,22+/m1/s1

InChI Key

CQLRUIIRRZYHHS-LFXZADKFSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as sesquiterpenoids. These are terpenes with three consecutive isoprene units.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Prenol lipids

Sub Class

Sesquiterpenoids

Direct Parent

Sesquiterpenoids

Alternative Parents

Substituents

Sesquiterpenoid
Cadinane sesquiterpenoid
Tertiary alcohol
Cyclic alcohol
Organic oxygen compound
Hydrocarbon derivative
Organooxygen compound
Alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Not Available

Exogenous (HMDB: HMDB0302682)

Food

Fruit

Berry

Strawberry (FooDB: FOOD00083)
Sea-buckthornberry (FooDB: FOOD00087)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	0.64	ALOGPS
logP	0.0011	ChemAxon
logS	-2.6	ALOGPS
pKa (Strongest Acidic)	6.44	ChemAxon
pKa (Strongest Basic)	-3	ChemAxon
Physiological Charge	-1	ChemAxon
Hydrogen Acceptor Count	12	ChemAxon
Hydrogen Donor Count	7	ChemAxon
Polar Surface Area	195.6 Å²	ChemAxon
Rotatable Bond Count	5	ChemAxon
Refractivity	113.76 m³·mol⁻¹	ChemAxon
Polarizability	45.4 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	Yes	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
AllCCS	[M+H]+	208.791	32859911
AllCCS	[M+H-H2O]+	206.518	32859911
AllCCS	[M+Na]+	211.471	32859911
AllCCS	[M+NH4]+	210.876	32859911
AllCCS	[M-H]-	206.821	32859911
AllCCS	[M+Na-2H]-	207.42	32859911
AllCCS	[M+HCOO]-	208.232	32859911
DeepCCS	[M+H]+	205.728	30932474
DeepCCS	[M-H]-	203.903	30932474
DeepCCS	[M-2H]-	237.147	30932474
DeepCCS	[M+Na]+	211.334	30932474

Predicted Kovats Retention Indices

Not Available

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - Isorhamnetin 3-beta-D-glucoside GC-MS (TMS_2_12) - 70eV, Positive	Not Available	2022-08-08	Wishart Lab	View Spectrum
MS	Mass Spectrum (Electron Ionization)	Not Available	2022-08-06	Not Available	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 10V, Positive-QTOF	splash10-016r-0109800000-1fb63c3c5d290ba580ed	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 20V, Positive-QTOF	splash10-014i-0149100000-caab063b1c5e23ef7519	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 40V, Positive-QTOF	splash10-0uy0-4879000000-0d2986b183e27f3e8e50	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 10V, Negative-QTOF	splash10-00or-1105900000-d75d032abbcba4b9ce54	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 20V, Negative-QTOF	splash10-014i-2179300000-274bc295dd8a89dfc6e2	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 40V, Negative-QTOF	splash10-00kb-3293000000-e20369b030c75350b7fc	2016-08-03	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 10V, Negative-QTOF	splash10-004i-0000900000-eb5beabac8fd02bbd315	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 20V, Negative-QTOF	splash10-004i-0005900000-2e73155f50b1e219d0c3	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 40V, Negative-QTOF	splash10-03di-0019100000-eaa122d134bed43dafd7	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 10V, Positive-QTOF	splash10-014i-0009200000-b7d831e7c041b4089664	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 20V, Positive-QTOF	splash10-0190-0009900000-6eb06f25836eb1f2fbe2	2021-10-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - Isorhamnetin 3-beta-D-glucoside 40V, Positive-QTOF	splash10-014i-0009000000-235a2c69093cac80b556	2021-10-21	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, H₂O, predicted)	2022-08-21	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB005749

KNApSAcK ID

C00005525

Chemspider ID

4477169

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

Not Available

PDB ID

Not Available

ChEBI ID

75750

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for Isorhamnetin 3-beta-D-glucoside (HMDB0302682)

MOL for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

3D MOL for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

3D SDF for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

3D-SDF for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

PDB for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

3D PDB for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

SMILES for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

INCHI for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

Structure for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

3D Structure for HMDB0302682 (Isorhamnetin 3-beta-D-glucoside)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

GC-MS Spectra

MS/MS Spectra

NMR Spectra