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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 06:25:24 UTC
Update Date2021-09-24 06:25:24 UTC
HMDB IDHMDB0304011
Secondary Accession NumbersNone
Metabolite Identification
Common Name1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate
Description1,5-bisdiphosphoinositol-1d-myo-inositol (2,3,4,6)tetrakisphosphate, also known as 1,5-(pp)2-ip4 or 1d-myo-inositol 1-diphosphate pentakisphosphate, is a member of the class of compounds known as inositol phosphates. Inositol phosphates are compounds containing a phosphate group attached to an inositol (or cyclohexanehexol) moiety. 1,5-bisdiphosphoinositol-1d-myo-inositol (2,3,4,6)tetrakisphosphate is soluble (in water) and an extremely strong acidic compound (based on its pKa). 1,5-bisdiphosphoinositol-1d-myo-inositol (2,3,4,6)tetrakisphosphate can be found in a number of food items such as cauliflower, garden rhubarb, asparagus, and bayberry, which makes 1,5-bisdiphosphoinositol-1d-myo-inositol (2,3,4,6)tetrakisphosphate a potential biomarker for the consumption of these food products. 1,5-bisdiphosphoinositol-1d-myo-inositol (2,3,4,6)tetrakisphosphate may be a unique S.cerevisiae (yeast) metabolite.
Structure
Thumb
Synonyms
ValueSource
(1R,3S,4R,5S,6R)-2,4,5,6-Tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)]ChEBI
1,5-(PP)2-IP4ChEBI
(1R,3S,4R,5S,6R)-2,4,5,6-Tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphoric acid)]Generator
1D-Myo-inositol 1,5-bis(diphosphoric acid) 2,3,4,6-tetrakisphosphoric acidGenerator
1,5-Bis(diphospho)-1D-myo-inositol 2,3,4,6-tetrakisphosphoric acidGenerator
Chemical FormulaC6H7O30P8
Average Molecular Weight806.889
Monoisotopic Molecular Weight806.699441348
IUPAC Name{[(1S,2R,3R,4R,5R,6R)-3-{[hydroxy(phosphonatooxy)phosphoryl]oxy}-2,4,5,6-tetrakis(phosphonatooxy)cyclohexyl phosphonato]oxy}phosphonate
Traditional Name[(1S,2R,3R,4R,5R,6R)-3-{[hydroxy(phosphonatooxy)phosphoryl]oxy}-2,4,5,6-tetrakis(phosphonatooxy)cyclohexyl phosphonato]oxyphosphonate
CAS Registry NumberNot Available
SMILES
[H][C@]1(OP([O-])([O-])=O)[C@@]([H])(OP([O-])([O-])=O)[C@@]([H])(OP(O)(=O)OP([O-])([O-])=O)[C@]([H])(OP([O-])([O-])=O)[C@@]([H])(OP([O-])(=O)OP([O-])([O-])=O)[C@]1([H])OP([O-])([O-])=O
InChI Identifier
InChI=1S/C6H20O30P8/c7-37(8,9)29-1-2(30-38(10,11)12)5(33-43(25,26)35-41(19,20)21)4(32-40(16,17)18)6(3(1)31-39(13,14)15)34-44(27,28)36-42(22,23)24/h1-6H,(H,25,26)(H,27,28)(H2,7,8,9)(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)(H2,19,20,21)(H2,22,23,24)/p-13/t1-,2-,3-,4-,5+,6-/m1/s1
InChI KeyHHQOOERQSFJGEP-SLWYWOEDSA-A
Chemical Taxonomy
Description Belongs to the class of organic compounds known as inositol phosphates. Inositol phosphates are compounds containing a phosphate group attached to an inositol (or cyclohexanehexol) moiety.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassAlcohols and polyols
Direct ParentInositol phosphates
Alternative Parents
Substituents
  • Inositol phosphate
  • Organic pyrophosphate
  • Alkyl phosphate
  • Phosphoric acid ester
  • Organic phosphoric acid derivative
  • Organic oxide
  • Hydrocarbon derivative
  • Organic anion
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP1.07ALOGPS
logP-5.4ChemAxon
logS-1.6ALOGPS
pKa (Strongest Acidic)0.14ChemAxon
Physiological Charge-13ChemAxon
Hydrogen Acceptor Count22ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area530.41 ŲChemAxon
Rotatable Bond Count16ChemAxon
Refractivity108.18 m³·mol⁻¹ChemAxon
Polarizability48.02 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+206.16332859911
AllCCS[M+H-H2O]+205.42732859911
AllCCS[M+Na]+206.98832859911
AllCCS[M+NH4]+206.80932859911
AllCCS[M-H]--1.81332859911
AllCCS[M+Na-2H]--3.23632859911
AllCCS[M+HCOO]--4.55832859911
DeepCCS[M+H]+167.74430932474
DeepCCS[M-H]-165.84930932474
DeepCCS[M-2H]-199.78930932474
DeepCCS[M+Na]+173.77530932474

Predicted Kovats Retention Indices

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate,1TMS,isomer #1C[Si](C)(C)OP(=O)(O[C@H]1[C@H](OP(=O)([O-])[O-])[C@@H](OP(=O)([O-])OP(=O)([O-])[O-])[C@H](OP(=O)([O-])[O-])[C@@H](OP(=O)([O-])[O-])[C@H]1OP(=O)([O-])[O-])OP(=O)([O-])[O-]3668.7Semi standard non polar33892256
1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate,1TMS,isomer #1C[Si](C)(C)OP(=O)(O[C@H]1[C@H](OP(=O)([O-])[O-])[C@@H](OP(=O)([O-])OP(=O)([O-])[O-])[C@H](OP(=O)([O-])[O-])[C@@H](OP(=O)([O-])[O-])[C@H]1OP(=O)([O-])[O-])OP(=O)([O-])[O-]4218.8Standard non polar33892256
1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate,1TMS,isomer #1C[Si](C)(C)OP(=O)(O[C@H]1[C@H](OP(=O)([O-])[O-])[C@@H](OP(=O)([O-])OP(=O)([O-])[O-])[C@H](OP(=O)([O-])[O-])[C@@H](OP(=O)([O-])[O-])[C@H]1OP(=O)([O-])[O-])OP(=O)([O-])[O-]5565.7Standard polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate 10V, Positive-QTOFsplash10-0a4i-0000000090-0d1b87d1d0ba76281c7b2016-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate 20V, Positive-QTOFsplash10-0udi-0000001690-e6d1cfe0702d8492c49d2016-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate 40V, Positive-QTOFsplash10-00ri-1300103910-dccfe8e1417bbc8385342016-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate 10V, Negative-QTOFsplash10-0a4i-0000000090-435e1f9f216600c8d23a2016-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate 20V, Negative-QTOFsplash10-0aor-2000101390-f798c56a23b58ae638882016-09-14Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 1,5-bisdiphosphoinositol-1D-myo-inositol (2,3,4,6)tetrakisphosphate 40V, Negative-QTOFsplash10-0059-9300003200-cf9864cfce206464e9c32016-09-14Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030194
KNApSAcK IDNot Available
Chemspider ID29368452
KEGG Compound IDNot Available
BioCyc IDCPD-11938
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI ID62923
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available