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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 09:02:54 UTC
Update Date2021-09-24 09:02:55 UTC
HMDB IDHMDB0304341
Secondary Accession NumbersNone
Metabolite Identification
Common Namedivinylchlorophyllide a
Description Divinylchlorophyllide a is practically insoluble (in water) and a weakly acidic compound (based on its pKa). Divinylchlorophyllide a can be found in a number of food items such as wild rice, pecan nut, vaccinium (blueberry, cranberry, huckleberry), and black-eyed pea, which makes divinylchlorophyllide a a potential biomarker for the consumption of these food products.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC35H30MgN4O5
Average Molecular Weight610.954
Monoisotopic Molecular Weight610.20775894
IUPAC Name8-(2-carboxyethyl)-14,19-diethenyl-5-(methoxycarbonyl)-9,13,18,25-tetramethyl-4-oxo-1,24,26,27-tetraaza-23-magnesaheptacyclo[10.10.2.1^{3,22}.1^{7,10}.1^{17,20}.0^{2,6}.0^{15,24}]heptacosa-2(6),3(25),7(27),10,12,14,16,18,20(26),21-decaen-5-ide
Traditional Name8-(2-carboxyethyl)-14,19-diethenyl-5-(methoxycarbonyl)-9,13,18,25-tetramethyl-4-oxo-1,24,26,27-tetraaza-23-magnesaheptacyclo[10.10.2.1^{3,22}.1^{7,10}.1^{17,20}.0^{2,6}.0^{15,24}]heptacosa-2(6),3(25),7(27),10,12,14,16,18,20(26),21-decaen-5-ide
CAS Registry NumberNot Available
SMILES
COC(=O)[C-]1C(=O)C2=C(C)C3=CC4=NC(=CC5=C(C=C)C(C)=C6C=C7N=C(C(CCC([O-])=O)C7C)C1=C2N3[Mg]N56)C(C)=C4C=C
InChI Identifier
InChI=1S/C35H33N4O5.Mg/c1-8-19-15(3)22-12-24-17(5)21(10-11-28(40)41)32(38-24)30-31(35(43)44-7)34(42)29-18(6)25(39-33(29)30)14-27-20(9-2)16(4)23(37-27)13-26(19)36-22;/h8-9,12-14,17,21H,1-2,10-11H2,3-7H3,(H3,36,37,38,39,40,41,42);/q-1;+2/p-3
InChI KeyUNSKJTNUDHVNJT-UHFFFAOYSA-K
Chemical Taxonomy
Description Belongs to the class of organic compounds known as metallotetrapyrroles. These are polycyclic compounds containing a tetrapyrrole skeleton combined with a metal atom.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassTetrapyrroles and derivatives
Sub ClassMetallotetrapyrroles
Direct ParentMetallotetrapyrroles
Alternative Parents
Substituents
  • Metallotetrapyrrole skeleton
  • Aryl ketone
  • Dicarboxylic acid or derivatives
  • Substituted pyrrole
  • Pyrrole
  • Pyrroline
  • Heteroaromatic compound
  • Methyl ester
  • Vinylogous amide
  • Carboxylic acid ester
  • Ketimine
  • Ketone
  • Organic metal salt
  • Carboxylic acid
  • Carboxylic acid derivative
  • Metalloheterocycle
  • Azacycle
  • Organonitrogen compound
  • Organic oxygen compound
  • Carbonyl group
  • Imine
  • Organic nitrogen compound
  • Organooxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organic salt
  • Organic anion
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.93ALOGPS
logP4.6ChemAxon
logS-4.1ALOGPS
pKa (Strongest Acidic)3.51ChemAxon
pKa (Strongest Basic)7.05ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count6ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area119.14 ŲChemAxon
Rotatable Bond Count7ChemAxon
Refractivity178.45 m³·mol⁻¹ChemAxon
Polarizability68.05 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+239.5832859911
AllCCS[M+H-H2O]+238.16432859911
AllCCS[M+Na]+241.22732859911
AllCCS[M+NH4]+240.86332859911
AllCCS[M-H]-235.79132859911
AllCCS[M+Na-2H]-237.42832859911
AllCCS[M+HCOO]-239.38132859911

Predicted Kovats Retention Indices

Not Available
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB030834
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available