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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 09:53:37 UTC
Update Date2021-09-24 09:53:37 UTC
HMDB IDHMDB0304454
Secondary Accession NumbersNone
Metabolite Identification
Common Namepelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside
Description Pelargonidin-3,5-diglucoside-5-o-p-coumaroylglucoside is practically insoluble (in water) and a very weakly acidic compound (based on its pKa). Pelargonidin-3,5-diglucoside-5-o-p-coumaroylglucoside can be found in a number of food items such as rosemary, common oregano, sugar apple, and bitter gourd, which makes pelargonidin-3,5-diglucoside-5-o-p-coumaroylglucoside a potential biomarker for the consumption of these food products.
Structure
Thumb
Synonyms
ValueSource
3-(4-Hydroxyphenyl)-1-{[(3,4,5-trihydroxy-6-{[7-hydroxy-2-(4-oxocyclohexa-2,5-dien-1-ylidene)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-2H-chromen-5-yl]oxy}oxan-2-yl)methyl]oxidaniumylidene}prop-2-en-1-olic acidGenerator
Chemical FormulaC36H36O17
Average Molecular Weight740.667
Monoisotopic Molecular Weight740.195249699
IUPAC Name2-(4-hydroxyphenyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5-{[3,4,5-trihydroxy-6-({[3-(4-hydroxyphenyl)prop-2-enoyl]oxy}methyl)oxan-2-yl]oxy}-1λ⁴-chromen-1-ylium-7-olate
Traditional Name2-(4-hydroxyphenyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-5-{[3,4,5-trihydroxy-6-({[3-(4-hydroxyphenyl)prop-2-enoyl]oxy}methyl)oxan-2-yl]oxy}-1λ⁴-chromen-1-ylium-7-olate
CAS Registry NumberNot Available
SMILES
OCC1OC(OC2=CC3=C(C=C([O-])C=C3OC3OC(COC(=O)C=CC4=CC=C(O)C=C4)C(O)C(O)C3O)[O+]=C2C2=CC=C(O)C=C2)C(O)C(O)C1O
InChI Identifier
InChI=1S/C36H36O17/c37-14-25-28(42)30(44)32(46)36(52-25)51-24-13-21-22(49-34(24)17-4-8-19(39)9-5-17)11-20(40)12-23(21)50-35-33(47)31(45)29(43)26(53-35)15-48-27(41)10-3-16-1-6-18(38)7-2-16/h1-13,25-26,28-33,35-37,42-47H,14-15H2,(H2-,38,39,40,41)
InChI KeyGBDTYZCMNRLPES-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonoid 3-o-p-coumaroyl glycosides. These are flavonoid 3-O-glycosides where the carbohydrate moiety is esterified with a p-coumaric acid. P-coumaric acid is an organic derivative of cinnamic acid, that carries a hydroxyl group at the 4-position of the benzene ring.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavonoid glycosides
Direct ParentFlavonoid 3-O-p-coumaroyl glycosides
Alternative Parents
Substituents
  • Flavonoid 3-o-6-p-coumaroyl-glycoside
  • Flavonoid-3-o-glycoside
  • 4'-hydroxyflavonoid
  • 5-hydroxyflavonoid
  • Hydroxyflavonoid
  • Coumaric acid ester
  • Hydroxycinnamic acid or derivatives
  • Coumaric acid or derivatives
  • Cinnamic acid or derivatives
  • Cinnamic acid ester
  • Glycosyl compound
  • O-glycosyl compound
  • Benzopyran
  • 1-benzopyran
  • Styrene
  • 1-hydroxy-2-unsubstituted benzenoid
  • Fatty acid ester
  • Phenol
  • 1-hydroxy-4-unsubstituted benzenoid
  • Fatty acyl
  • Monosaccharide
  • Monocyclic benzene moiety
  • Oxane
  • Benzenoid
  • Vinylogous acid
  • Heteroaromatic compound
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Carboxylic acid ester
  • Cyclic ketone
  • Secondary alcohol
  • Polyol
  • Acetal
  • Organoheterocyclic compound
  • Oxacycle
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Carbonyl group
  • Organic oxide
  • Hydrocarbon derivative
  • Alcohol
  • Organooxygen compound
  • Organic oxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP2.12ALOGPS
logP1.42ChemAxon
logS-3.8ALOGPS
pKa (Strongest Acidic)6.66ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count16ChemAxon
Hydrogen Donor Count9ChemAxon
Polar Surface Area281.49 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity198.52 m³·mol⁻¹ChemAxon
Polarizability72.58 ųChemAxon
Number of Rings6ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+254.39532859911
AllCCS[M+H-H2O]+254.00432859911
AllCCS[M+Na]+254.79532859911
AllCCS[M+NH4]+254.71332859911
AllCCS[M-H]-244.67832859911
AllCCS[M+Na-2H]-248.30232859911
AllCCS[M+HCOO]-252.37932859911
DeepCCS[M+H]+257.3530932474
DeepCCS[M-H]-255.14530932474
DeepCCS[M-2H]-288.38330932474
DeepCCS[M+Na]+263.23530932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - pelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside 10V, Positive-QTOFsplash10-01di-0631970600-60843e47722d1da0c2152019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - pelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside 20V, Positive-QTOFsplash10-014i-0490520000-b0213a1498e93f3b2c8b2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - pelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside 40V, Positive-QTOFsplash10-014i-1790200000-a595d12fb8e54b76b25a2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - pelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside 10V, Negative-QTOFsplash10-03ds-0901210300-293734d9a1d7e1fe41ef2019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - pelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside 20V, Negative-QTOFsplash10-03di-0911420100-b6605fe3299c8fdaf83f2019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - pelargonidin-3,5-diglucoside-5-O-p-coumaroylglucoside 40V, Negative-QTOFsplash10-03xr-3953200000-9970f962131ea9d68a7d2019-02-23Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB031092
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available