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Showing metabocard for Theaflavin 3'-O-gallate (HMDB0304740)

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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2021-09-24 12:04:01 UTC
Update Date2021-09-24 12:04:01 UTC
HMDB IDHMDB0304740
Secondary Accession NumbersNone
Metabolite Identification
Common NameTheaflavin 3'-O-gallate
Description(2S)-2-(nonadecanoyloxy)-3-(tridecanoyloxy)propyl (7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate belongs to the class of organic compounds known as triacylglycerols. These are glycerides consisting of three fatty acid chains covalently bonded to a glycerol molecule through ester linkages. Based on a literature review very few articles have been published on (2S)-2-(nonadecanoyloxy)-3-(tridecanoyloxy)propyl (7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate.
Structure
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MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0304740 (Theaflavin 3'-O-gallate)

TG(13:0/19:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))
  Mrv1652312191802042D          

 64 63  0  0  1  0            999 V2000
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   23.1832   -7.0352    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   22.2219   -6.4804    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.1442   -5.3703    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.2606   -7.0352    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.4330   -8.1452    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.9384   -8.1590    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   23.4298   -4.9579    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.4298   -4.1865    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
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3D MOL for HMDB0304740 (Theaflavin 3'-O-gallate)

HMDB0304740
     RDKit          3D
Theaflavin 3'-O-gallate
161160  0  0  0  0  0  0  0  0999 V2000
    4.5191    2.0717    0.7935 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9664    0.9586   -0.1325 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8501    0.3730    0.6016 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6558    0.3417    0.1295 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2714    0.8725   -1.1853 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2526    1.9349   -1.1248 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9202    1.9665   -1.6741 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4438    0.8348   -2.5089 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6061    1.2729   -3.9028 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9829    0.7012   -4.9026 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0513   -0.4568   -4.7787 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.0125   -3.3632   -4.0853 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.8569   -7.0616   -2.8514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0687   -7.1939   -1.8595 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1649   -6.4040   -1.6992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0337   -5.6947   -0.3845 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9324   -4.7092    0.0391 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8891   -4.3265   -0.6660 O   0  0  0  0  0  0  0  0  0  0  0  0
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    1.6367   -3.1251    1.7849 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2145   -2.7835    3.2338 C   0  0  2  0  0  0  0  0  0  0  0  0
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   -5.6387   -2.8265    7.2020 C   0  0  0  0  0  0  0  0  0  0  0  0
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    2.4717   -0.8369    4.3384 C   0  0  0  0  0  0  0  0  0  0  0  0
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    4.5489    3.7636    4.5913 C   0  0  0  0  0  0  0  0  0  0  0  0
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    3.0156    7.3747   -1.2012 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3538    7.8366   -2.5181 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8131    7.0842   -3.6567 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9574    5.9771   -4.1776 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3955    5.4047   -5.4487 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6813    4.8265   -5.7489 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2346    3.6331   -5.0854 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4850    3.8076   -3.6554 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0417    2.5880   -2.9556 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2093    2.7070    0.2215 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7091    2.6178    1.2774 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1178    1.5440    1.5667 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7903    0.2048   -0.1725 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7889    1.4592   -1.0637 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1022   -0.0591    1.5990 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8528   -0.0941    0.7158 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7645   -0.0255   -1.6815 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1286    1.1643   -1.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5077    2.8374   -0.5300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5979    2.8397   -1.5527 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.4939    0.6956   -2.1082 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.0181   -0.8908   -3.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9551   -0.1453   -5.1822 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5121   -1.2532   -6.8150 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2005   -3.3903   -6.2663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2504   -4.1131   -4.0117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8726   -2.5490   -3.3406 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -1.9048   -6.7584   -4.9207 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8093   -7.6709   -2.9395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2802   -7.9271   -1.0563 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5003   -5.8052   -2.5119 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

3D SDF for HMDB0304740 (Theaflavin 3'-O-gallate)

TG(13:0/19:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))
  Mrv1652312191802042D          

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M  END
> <DATABASE_ID>
HMDB0304740

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@](COC(=O)CCCCCCCCCCCC)(COC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)OC(=O)CCCCCCCCCCCCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C57H98O6/c1-4-7-10-13-16-19-22-24-26-28-29-30-32-33-35-38-41-44-47-50-56(59)62-53-54(52-61-55(58)49-46-43-40-37-21-18-15-12-9-6-3)63-57(60)51-48-45-42-39-36-34-31-27-25-23-20-17-14-11-8-5-2/h7,10,16,19,24,26,29-30,33,35,41,44,54H,4-6,8-9,11-15,17-18,20-23,25,27-28,31-32,34,36-40,42-43,45-53H2,1-3H3/b10-7-,19-16-,26-24-,30-29-,35-33-,44-41-/t54-/m0/s1

> <INCHI_KEY>
RNYPYOLUVPCWFW-WXUCRGGPSA-N

> <FORMULA>
C57H98O6

> <MOLECULAR_WEIGHT>
879.405

> <EXACT_MASS>
878.736340876

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_ATOM_COUNT>
161

> <JCHEM_AVERAGE_POLARIZABILITY>
113.73195404722446

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2S)-2-(nonadecanoyloxy)-3-(tridecanoyloxy)propyl (4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate

> <ALOGPS_LOGP>
10.77

> <JCHEM_LOGP>
19.420029734333333

> <ALOGPS_LOGS>
-8.03

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_BASIC>
-6.56701392859847

> <JCHEM_POLAR_SURFACE_AREA>
78.9

> <JCHEM_REFRACTIVITY>
275.5959

> <JCHEM_ROTATABLE_BOND_COUNT>
50

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.13e-06 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2S)-2-(nonadecanoyloxy)-3-(tridecanoyloxy)propyl (4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0304740 (Theaflavin 3'-O-gallate)

HMDB0304740
     RDKit          3D
Theaflavin 3'-O-gallate
161160  0  0  0  0  0  0  0  0999 V2000
    4.5191    2.0717    0.7935 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9664    0.9586   -0.1325 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8501    0.3730    0.6016 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6558    0.3417    0.1295 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2714    0.8725   -1.1853 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2526    1.9349   -1.1248 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9202    1.9665   -1.6741 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4438    0.8348   -2.5089 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6061    1.2729   -3.9028 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9829    0.7012   -4.9026 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0513   -0.4568   -4.7787 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5016   -1.5152   -5.7213 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8905   -2.7045   -5.4357 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0125   -3.3632   -4.0853 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4376   -3.8294   -4.0177 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7031   -5.1013   -3.9688 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6497   -6.1339   -3.9665 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8569   -7.0616   -2.8514 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0687   -7.1939   -1.8595 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1649   -6.4040   -1.6992 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0337   -5.6947   -0.3845 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9324   -4.7092    0.0391 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.8891   -4.3265   -0.6660 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8116   -4.1163    1.3122 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.6367   -3.1251    1.7849 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2145   -2.7835    3.2338 C   0  0  2  0  0  0  0  0  0  0  0  0
   -0.2782   -2.8912    3.3336 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9056   -1.8532    2.6147 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2880   -1.7836    2.5242 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9356   -2.6848    3.0984 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8784   -0.6572    1.7619 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3526   -0.8576    1.6397 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6472   -2.1179    0.8590 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1559   -2.2771    0.7881 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5872   -3.4713    0.0581 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2165   -4.8304    0.3948 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5088   -5.5725    1.5936 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0229   -5.3379    2.9446 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3003   -4.0883    3.6614 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7683   -4.1822    5.1148 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.0988   -2.8508    5.7790 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6387   -2.8265    7.2020 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7314   -1.6768    3.6870 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4717   -0.8369    4.3384 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3596   -1.4017    5.0875 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.3527    0.6451    4.2640 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6020    1.4172    4.5127 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3319    2.9016    4.4035 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5489    3.7636    4.5913 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1819    5.2121    4.5278 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5686    5.7696    3.3399 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3302    5.7986    2.0414 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4142    6.4594    1.0436 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0270    6.6952   -0.3288 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0156    7.3747   -1.2012 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3538    7.8366   -2.5181 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8131    7.0842   -3.6567 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9574    5.9771   -4.1776 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3955    5.4047   -5.4487 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6813    4.8265   -5.7489 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2346    3.6331   -5.0854 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4850    3.8076   -3.6554 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0417    2.5880   -2.9556 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2093    2.7070    0.2215 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7091    2.6178    1.2774 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1178    1.5440    1.5667 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7903    0.2048   -0.1725 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.7889    1.4592   -1.0637 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1022   -0.0591    1.5990 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8528   -0.0941    0.7158 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7645   -0.0255   -1.6815 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1286    1.1643   -1.8358 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5077    2.8374   -0.5300 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5979    2.8397   -1.5527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8316   -0.0017   -2.4174 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4939    0.6956   -2.1082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2789    2.1141   -4.1050 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1632    1.1180   -5.9249 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0181   -0.8908   -3.7984 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9551   -0.1453   -5.1822 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5121   -1.2532   -6.8150 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2005   -3.3903   -6.2663 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2504   -4.1131   -4.0117 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8726   -2.5490   -3.3406 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1902   -3.0349   -4.0167 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7713   -5.3749   -3.9348 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6400   -5.8399   -4.1571 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9048   -6.7584   -4.9207 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8093   -7.6709   -2.9395 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2802   -7.9271   -1.0563 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5003   -5.8052   -2.5119 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9766   -7.1637   -1.4879 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1340   -6.4404    0.4576 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0455   -5.1862   -0.3865 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6903   -2.2612    1.1415 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6828   -3.5460    1.8956 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6505   -3.6701    3.8594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6144   -2.8356    4.4088 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6527   -3.8506    2.9616 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6476    0.2636    2.3742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3942   -0.5780    0.7569 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8188   -0.8701    2.6560 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7709    0.0014    1.0862 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2557   -1.9215   -0.1860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1249   -3.0106    1.1876 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4684   -1.3800    0.1166 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6914   -2.0410    1.7212 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7484   -3.4382    0.0852 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4408   -3.2625   -1.0696 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0821   -5.0076    0.1836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6142   -5.4777   -0.5107 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2180   -6.7006    1.3813 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6706   -5.7718    1.6570 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8749   -5.5220    2.9985 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3648   -6.1789    3.6594 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3144   -3.7376    3.6372 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6260   -3.2899    3.2525 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6938   -4.3254    5.1532 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3766   -4.9444    5.6019 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6071   -1.9937    5.2412 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1910   -2.6273    5.7370 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4061   -3.2621    7.9013 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4646   -1.7824    7.5523 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6996   -3.3719    7.3729 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6305    0.9073    5.1134 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9116    0.9793    3.3282 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9177    1.1847    5.5541 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4537    1.1405    3.8607 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6099    3.1754    5.2206 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7716    3.1405    3.4659 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9138    3.5575    5.6263 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3935    3.4766    3.9329 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0700    5.8575    4.8085 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4729    5.3881    5.3915 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3321    6.8538    3.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5261    5.3263    3.1819 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6305    4.8290    1.6597 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1998    6.4973    2.2076 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4452    5.9177    0.9636 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1501    7.4837    1.4254 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3635    5.7220   -0.6858 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8955    7.3676   -0.2270 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6992    8.2953   -0.5871 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0731    6.7595   -1.1393 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1492    8.6817   -2.3606 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.4953    8.5276   -2.9203 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8748    6.7782   -3.5121 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9028    7.8169   -4.5319 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9545    6.5080   -4.4187 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6415    5.2189   -3.4657 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0757    6.1382   -6.2968 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6110    4.5708   -5.6784 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.4543    5.6680   -5.7105 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6806    4.6340   -6.9017 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5656    2.7634   -5.3336 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2471    3.4541   -5.5775 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2112    4.6362   -3.5071 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.5665    4.0587   -3.1299 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2681    1.7599   -2.9193 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.9245    2.1469   -3.3980 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2550    2.8279   -1.9024 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  2  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  1  0
 12 13  2  0
 13 14  1  0
 14 15  1  0
 15 16  2  0
 16 17  1  0
 17 18  1  0
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 19 20  1  0
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 22 23  2  0
 22 24  1  0
 24 25  1  0
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 29 30  2  0
 29 31  1  0
 31 32  1  0
 32 33  1  0
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 37 38  1  0
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 40 41  1  0
 41 42  1  0
 26 43  1  0
 43 44  1  0
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 48 49  1  0
 49 50  1  0
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 51 52  1  0
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 62 63  1  0
  1 64  1  0
  1 65  1  0
  1 66  1  0
  2 67  1  0
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  4 70  1  0
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  5 72  1  0
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 31100  1  0
 31101  1  0
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 63161  1  0
M  END
Download

PDB for HMDB0304740 (Theaflavin 3'-O-gallate)

HEADER    PROTEIN                                 19-DEC-18   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: TG(13:0/19:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))         
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-DEC-18         0                                  
HETATM    1  C   UNK     0      45.069 -12.096   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      43.275 -13.132   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      41.481 -12.097   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      45.069 -10.025   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      39.686 -13.132   0.000  0.00  0.00           O+0
HETATM    6  O   UNK     0      41.875 -15.204   0.000  0.00  0.00           O+0
HETATM    7  H   UNK     0      44.685 -15.230   0.000  0.00  0.00           H+0
HETATM    8  C   UNK     0      43.736  -9.255   0.000  0.00  0.00           C+0
HETATM    9  O   UNK     0      43.736  -7.815   0.000  0.00  0.00           O+0
HETATM   10  C   UNK     0      42.403 -10.026   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      41.070  -9.255   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      39.736 -10.026   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      38.403  -9.255   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      37.070 -10.026   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      35.737  -9.255   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      34.404 -10.026   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      33.071  -9.255   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      31.738 -10.026   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      30.405  -9.255   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      29.072 -10.026   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      27.739  -9.255   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      40.541 -15.974   0.000  0.00  0.00           C+0
HETATM   23  O   UNK     0      40.541 -17.414   0.000  0.00  0.00           O+0
HETATM   24  C   UNK     0      39.208 -15.203   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      37.875 -15.974   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      36.542 -15.203   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      35.209 -15.974   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      33.876 -15.203   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      32.543 -15.974   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      31.210 -15.203   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      29.877 -15.974   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      28.544 -15.203   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      27.211 -15.974   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      25.878 -15.203   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      24.545 -15.974   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      23.211 -15.203   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      21.878 -15.974   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      20.545 -15.203   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      19.212 -15.974   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      17.879 -15.203   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      16.546 -15.974   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      38.353 -12.362   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0      38.353 -10.922   0.000  0.00  0.00           O+0
HETATM   44  C   UNK     0      37.020 -13.133   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      35.687 -12.362   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      34.354 -13.133   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      32.814 -13.133   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      31.481 -12.362   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      30.148 -13.133   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      28.607 -13.133   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      27.274 -12.362   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      25.941 -13.133   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      24.401 -13.133   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      23.068 -12.362   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      21.735 -13.133   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      20.195 -13.133   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      18.862 -12.362   0.000  0.00  0.00           C+0
HETATM   58  C   UNK     0      17.529 -13.133   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      15.989 -13.133   0.000  0.00  0.00           C+0
HETATM   60  C   UNK     0      14.656 -12.362   0.000  0.00  0.00           C+0
HETATM   61  C   UNK     0      13.323 -13.133   0.000  0.00  0.00           C+0
HETATM   62  C   UNK     0      11.783 -13.133   0.000  0.00  0.00           C+0
HETATM   63  C   UNK     0      10.450 -12.362   0.000  0.00  0.00           C+0
HETATM   64  C   UNK     0       9.117 -13.133   0.000  0.00  0.00           C+0
CONECT    1    2    4                                                       
CONECT    2    1    6    7    3                                             
CONECT    3    2    5                                                       
CONECT    4    1    8                                                       
CONECT    5    3   42                                                       
CONECT    6    2   22                                                       
CONECT    7    2                                                            
CONECT    8    4    9   10                                                  
CONECT    9    8                                                            
CONECT   10    8   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   16                                                       
CONECT   16   15   17                                                       
CONECT   17   16   18                                                       
CONECT   18   17   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20                                                            
CONECT   22    6   23   24                                                  
CONECT   23   22                                                            
CONECT   24   22   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40                                                            
CONECT   42    5   43   44                                                  
CONECT   43   42                                                            
CONECT   44   42   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56   58                                                       
CONECT   58   57   59                                                       
CONECT   59   58   60                                                       
CONECT   60   59   61                                                       
CONECT   61   60   62                                                       
CONECT   62   61   63                                                       
CONECT   63   62   64                                                       
CONECT   64   63                                                            
MASTER        0    0    0    0    0    0    0    0   64    0  126    0
END
Download

3D PDB for HMDB0304740 (Theaflavin 3'-O-gallate)

COMPND    HMDB0304740
HETATM    1  C1  UNL     1       4.519   2.072   0.793  1.00  0.00           C  
HETATM    2  C2  UNL     1       3.966   0.959  -0.132  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.850   0.373   0.602  1.00  0.00           C  
HETATM    4  C4  UNL     1       1.656   0.342   0.129  1.00  0.00           C  
HETATM    5  C5  UNL     1       1.271   0.873  -1.185  1.00  0.00           C  
HETATM    6  C6  UNL     1       0.253   1.935  -1.125  1.00  0.00           C  
HETATM    7  C7  UNL     1      -0.920   1.966  -1.674  1.00  0.00           C  
HETATM    8  C8  UNL     1      -1.444   0.835  -2.509  1.00  0.00           C  
HETATM    9  C9  UNL     1      -1.606   1.273  -3.903  1.00  0.00           C  
HETATM   10  C10 UNL     1      -0.983   0.701  -4.903  1.00  0.00           C  
HETATM   11  C11 UNL     1      -0.051  -0.457  -4.779  1.00  0.00           C  
HETATM   12  C12 UNL     1      -0.502  -1.515  -5.721  1.00  0.00           C  
HETATM   13  C13 UNL     1      -0.890  -2.704  -5.436  1.00  0.00           C  
HETATM   14  C14 UNL     1      -1.013  -3.363  -4.085  1.00  0.00           C  
HETATM   15  C15 UNL     1      -2.438  -3.829  -4.018  1.00  0.00           C  
HETATM   16  C16 UNL     1      -2.703  -5.101  -3.969  1.00  0.00           C  
HETATM   17  C17 UNL     1      -1.650  -6.134  -3.967  1.00  0.00           C  
HETATM   18  C18 UNL     1      -1.857  -7.062  -2.851  1.00  0.00           C  
HETATM   19  C19 UNL     1      -1.069  -7.194  -1.859  1.00  0.00           C  
HETATM   20  C20 UNL     1       0.165  -6.404  -1.699  1.00  0.00           C  
HETATM   21  C21 UNL     1      -0.034  -5.695  -0.385  1.00  0.00           C  
HETATM   22  C22 UNL     1       0.932  -4.709   0.039  1.00  0.00           C  
HETATM   23  O1  UNL     1       1.889  -4.327  -0.666  1.00  0.00           O  
HETATM   24  O2  UNL     1       0.812  -4.116   1.312  1.00  0.00           O  
HETATM   25  C23 UNL     1       1.637  -3.125   1.785  1.00  0.00           C  
HETATM   26  C24 UNL     1       1.215  -2.784   3.234  1.00  0.00           C  
HETATM   27  C25 UNL     1      -0.278  -2.891   3.334  1.00  0.00           C  
HETATM   28  O3  UNL     1      -0.906  -1.853   2.615  1.00  0.00           O  
HETATM   29  C26 UNL     1      -2.288  -1.784   2.524  1.00  0.00           C  
HETATM   30  O4  UNL     1      -2.936  -2.685   3.098  1.00  0.00           O  
HETATM   31  C27 UNL     1      -2.878  -0.657   1.762  1.00  0.00           C  
HETATM   32  C28 UNL     1      -4.353  -0.858   1.640  1.00  0.00           C  
HETATM   33  C29 UNL     1      -4.647  -2.118   0.859  1.00  0.00           C  
HETATM   34  C30 UNL     1      -6.156  -2.277   0.788  1.00  0.00           C  
HETATM   35  C31 UNL     1      -6.587  -3.471   0.058  1.00  0.00           C  
HETATM   36  C32 UNL     1      -6.216  -4.830   0.395  1.00  0.00           C  
HETATM   37  C33 UNL     1      -6.509  -5.573   1.594  1.00  0.00           C  
HETATM   38  C34 UNL     1      -6.023  -5.338   2.945  1.00  0.00           C  
HETATM   39  C35 UNL     1      -6.300  -4.088   3.661  1.00  0.00           C  
HETATM   40  C36 UNL     1      -5.768  -4.182   5.115  1.00  0.00           C  
HETATM   41  C37 UNL     1      -6.099  -2.851   5.779  1.00  0.00           C  
HETATM   42  C38 UNL     1      -5.639  -2.826   7.202  1.00  0.00           C  
HETATM   43  O5  UNL     1       1.731  -1.677   3.687  1.00  0.00           O  
HETATM   44  C39 UNL     1       2.472  -0.837   4.338  1.00  0.00           C  
HETATM   45  O6  UNL     1       3.360  -1.402   5.087  1.00  0.00           O  
HETATM   46  C40 UNL     1       2.353   0.645   4.264  1.00  0.00           C  
HETATM   47  C41 UNL     1       3.602   1.417   4.513  1.00  0.00           C  
HETATM   48  C42 UNL     1       3.332   2.902   4.404  1.00  0.00           C  
HETATM   49  C43 UNL     1       4.549   3.764   4.591  1.00  0.00           C  
HETATM   50  C44 UNL     1       4.182   5.212   4.528  1.00  0.00           C  
HETATM   51  C45 UNL     1       3.569   5.770   3.340  1.00  0.00           C  
HETATM   52  C46 UNL     1       4.330   5.799   2.041  1.00  0.00           C  
HETATM   53  C47 UNL     1       3.414   6.459   1.044  1.00  0.00           C  
HETATM   54  C48 UNL     1       4.027   6.695  -0.329  1.00  0.00           C  
HETATM   55  C49 UNL     1       3.016   7.375  -1.201  1.00  0.00           C  
HETATM   56  C50 UNL     1       3.354   7.837  -2.518  1.00  0.00           C  
HETATM   57  C51 UNL     1       3.813   7.084  -3.657  1.00  0.00           C  
HETATM   58  C52 UNL     1       2.957   5.977  -4.178  1.00  0.00           C  
HETATM   59  C53 UNL     1       3.396   5.405  -5.449  1.00  0.00           C  
HETATM   60  C54 UNL     1       4.681   4.826  -5.749  1.00  0.00           C  
HETATM   61  C55 UNL     1       5.235   3.633  -5.085  1.00  0.00           C  
HETATM   62  C56 UNL     1       5.485   3.808  -3.655  1.00  0.00           C  
HETATM   63  C57 UNL     1       6.042   2.588  -2.956  1.00  0.00           C  
HETATM   64  H1  UNL     1       5.209   2.707   0.221  1.00  0.00           H  
HETATM   65  H2  UNL     1       3.709   2.618   1.277  1.00  0.00           H  
HETATM   66  H3  UNL     1       5.118   1.544   1.567  1.00  0.00           H  
HETATM   67  H4  UNL     1       4.790   0.205  -0.173  1.00  0.00           H  
HETATM   68  H5  UNL     1       3.789   1.459  -1.064  1.00  0.00           H  
HETATM   69  H6  UNL     1       3.102  -0.059   1.599  1.00  0.00           H  
HETATM   70  H7  UNL     1       0.853  -0.094   0.716  1.00  0.00           H  
HETATM   71  H8  UNL     1       0.764  -0.026  -1.682  1.00  0.00           H  
HETATM   72  H9  UNL     1       2.129   1.164  -1.836  1.00  0.00           H  
HETATM   73  H10 UNL     1       0.508   2.837  -0.530  1.00  0.00           H  
HETATM   74  H11 UNL     1      -1.598   2.840  -1.553  1.00  0.00           H  
HETATM   75  H12 UNL     1      -0.832  -0.002  -2.417  1.00  0.00           H  
HETATM   76  H13 UNL     1      -2.494   0.696  -2.108  1.00  0.00           H  
HETATM   77  H14 UNL     1      -2.279   2.114  -4.105  1.00  0.00           H  
HETATM   78  H15 UNL     1      -1.163   1.118  -5.925  1.00  0.00           H  
HETATM   79  H16 UNL     1       0.018  -0.891  -3.798  1.00  0.00           H  
HETATM   80  H17 UNL     1       0.955  -0.145  -5.182  1.00  0.00           H  
HETATM   81  H18 UNL     1      -0.512  -1.253  -6.815  1.00  0.00           H  
HETATM   82  H19 UNL     1      -1.200  -3.390  -6.266  1.00  0.00           H  
HETATM   83  H20 UNL     1      -0.250  -4.113  -4.012  1.00  0.00           H  
HETATM   84  H21 UNL     1      -0.873  -2.549  -3.341  1.00  0.00           H  
HETATM   85  H22 UNL     1      -3.190  -3.035  -4.017  1.00  0.00           H  
HETATM   86  H23 UNL     1      -3.771  -5.375  -3.935  1.00  0.00           H  
HETATM   87  H24 UNL     1      -0.640  -5.840  -4.157  1.00  0.00           H  
HETATM   88  H25 UNL     1      -1.905  -6.758  -4.921  1.00  0.00           H  
HETATM   89  H26 UNL     1      -2.809  -7.671  -2.939  1.00  0.00           H  
HETATM   90  H27 UNL     1      -1.280  -7.927  -1.056  1.00  0.00           H  
HETATM   91  H28 UNL     1       0.500  -5.805  -2.512  1.00  0.00           H  
HETATM   92  H29 UNL     1       0.977  -7.164  -1.488  1.00  0.00           H  
HETATM   93  H30 UNL     1      -0.134  -6.440   0.458  1.00  0.00           H  
HETATM   94  H31 UNL     1      -1.045  -5.186  -0.387  1.00  0.00           H  
HETATM   95  H32 UNL     1       1.690  -2.261   1.141  1.00  0.00           H  
HETATM   96  H33 UNL     1       2.683  -3.546   1.896  1.00  0.00           H  
HETATM   97  H34 UNL     1       1.650  -3.670   3.859  1.00  0.00           H  
HETATM   98  H35 UNL     1      -0.614  -2.836   4.409  1.00  0.00           H  
HETATM   99  H36 UNL     1      -0.653  -3.851   2.962  1.00  0.00           H  
HETATM  100  H37 UNL     1      -2.648   0.264   2.374  1.00  0.00           H  
HETATM  101  H38 UNL     1      -2.394  -0.578   0.757  1.00  0.00           H  
HETATM  102  H39 UNL     1      -4.819  -0.870   2.656  1.00  0.00           H  
HETATM  103  H40 UNL     1      -4.771   0.001   1.086  1.00  0.00           H  
HETATM  104  H41 UNL     1      -4.256  -1.922  -0.186  1.00  0.00           H  
HETATM  105  H42 UNL     1      -4.125  -3.011   1.188  1.00  0.00           H  
HETATM  106  H43 UNL     1      -6.468  -1.380   0.117  1.00  0.00           H  
HETATM  107  H44 UNL     1      -6.691  -2.041   1.721  1.00  0.00           H  
HETATM  108  H45 UNL     1      -7.748  -3.438   0.085  1.00  0.00           H  
HETATM  109  H46 UNL     1      -6.441  -3.262  -1.070  1.00  0.00           H  
HETATM  110  H47 UNL     1      -5.082  -5.008   0.184  1.00  0.00           H  
HETATM  111  H48 UNL     1      -6.614  -5.478  -0.511  1.00  0.00           H  
HETATM  112  H49 UNL     1      -6.218  -6.701   1.381  1.00  0.00           H  
HETATM  113  H50 UNL     1      -7.671  -5.772   1.657  1.00  0.00           H  
HETATM  114  H51 UNL     1      -4.875  -5.522   2.999  1.00  0.00           H  
HETATM  115  H52 UNL     1      -6.365  -6.179   3.659  1.00  0.00           H  
HETATM  116  H53 UNL     1      -7.314  -3.738   3.637  1.00  0.00           H  
HETATM  117  H54 UNL     1      -5.626  -3.290   3.252  1.00  0.00           H  
HETATM  118  H55 UNL     1      -4.694  -4.325   5.153  1.00  0.00           H  
HETATM  119  H56 UNL     1      -6.377  -4.944   5.602  1.00  0.00           H  
HETATM  120  H57 UNL     1      -5.607  -1.994   5.241  1.00  0.00           H  
HETATM  121  H58 UNL     1      -7.191  -2.627   5.737  1.00  0.00           H  
HETATM  122  H59 UNL     1      -6.406  -3.262   7.901  1.00  0.00           H  
HETATM  123  H60 UNL     1      -5.465  -1.782   7.552  1.00  0.00           H  
HETATM  124  H61 UNL     1      -4.700  -3.372   7.373  1.00  0.00           H  
HETATM  125  H62 UNL     1       1.630   0.907   5.113  1.00  0.00           H  
HETATM  126  H63 UNL     1       1.912   0.979   3.328  1.00  0.00           H  
HETATM  127  H64 UNL     1       3.918   1.185   5.554  1.00  0.00           H  
HETATM  128  H65 UNL     1       4.454   1.140   3.861  1.00  0.00           H  
HETATM  129  H66 UNL     1       2.610   3.175   5.221  1.00  0.00           H  
HETATM  130  H67 UNL     1       2.772   3.140   3.466  1.00  0.00           H  
HETATM  131  H68 UNL     1       4.914   3.558   5.626  1.00  0.00           H  
HETATM  132  H69 UNL     1       5.394   3.477   3.933  1.00  0.00           H  
HETATM  133  H70 UNL     1       5.070   5.857   4.809  1.00  0.00           H  
HETATM  134  H71 UNL     1       3.473   5.388   5.392  1.00  0.00           H  
HETATM  135  H72 UNL     1       3.332   6.854   3.556  1.00  0.00           H  
HETATM  136  H73 UNL     1       2.526   5.326   3.182  1.00  0.00           H  
HETATM  137  H74 UNL     1       4.630   4.829   1.660  1.00  0.00           H  
HETATM  138  H75 UNL     1       5.200   6.497   2.208  1.00  0.00           H  
HETATM  139  H76 UNL     1       2.445   5.918   0.964  1.00  0.00           H  
HETATM  140  H77 UNL     1       3.150   7.484   1.425  1.00  0.00           H  
HETATM  141  H78 UNL     1       4.363   5.722  -0.686  1.00  0.00           H  
HETATM  142  H79 UNL     1       4.895   7.368  -0.227  1.00  0.00           H  
HETATM  143  H80 UNL     1       2.699   8.295  -0.587  1.00  0.00           H  
HETATM  144  H81 UNL     1       2.073   6.760  -1.139  1.00  0.00           H  
HETATM  145  H82 UNL     1       4.149   8.682  -2.361  1.00  0.00           H  
HETATM  146  H83 UNL     1       2.495   8.528  -2.920  1.00  0.00           H  
HETATM  147  H84 UNL     1       4.875   6.778  -3.512  1.00  0.00           H  
HETATM  148  H85 UNL     1       3.903   7.817  -4.532  1.00  0.00           H  
HETATM  149  H86 UNL     1       1.954   6.508  -4.419  1.00  0.00           H  
HETATM  150  H87 UNL     1       2.641   5.219  -3.466  1.00  0.00           H  
HETATM  151  H88 UNL     1       3.076   6.138  -6.297  1.00  0.00           H  
HETATM  152  H89 UNL     1       2.611   4.571  -5.678  1.00  0.00           H  
HETATM  153  H90 UNL     1       5.454   5.668  -5.710  1.00  0.00           H  
HETATM  154  H91 UNL     1       4.681   4.634  -6.902  1.00  0.00           H  
HETATM  155  H92 UNL     1       4.566   2.763  -5.334  1.00  0.00           H  
HETATM  156  H93 UNL     1       6.247   3.454  -5.578  1.00  0.00           H  
HETATM  157  H94 UNL     1       6.211   4.636  -3.507  1.00  0.00           H  
HETATM  158  H95 UNL     1       4.566   4.059  -3.130  1.00  0.00           H  
HETATM  159  H96 UNL     1       5.268   1.760  -2.919  1.00  0.00           H  
HETATM  160  H97 UNL     1       6.925   2.147  -3.398  1.00  0.00           H  
HETATM  161  H98 UNL     1       6.255   2.828  -1.902  1.00  0.00           H  
CONECT    1    2   64   65   66
CONECT    2    3   67   68
CONECT    3    4    4   69
CONECT    4    5   70
CONECT    5    6   71   72
CONECT    6    7    7   73
CONECT    7    8   74
CONECT    8    9   75   76
CONECT    9   10   10   77
CONECT   10   11   78
CONECT   11   12   79   80
CONECT   12   13   13   81
CONECT   13   14   82
CONECT   14   15   83   84
CONECT   15   16   16   85
CONECT   16   17   86
CONECT   17   18   87   88
CONECT   18   19   19   89
CONECT   19   20   90
CONECT   20   21   91   92
CONECT   21   22   93   94
CONECT   22   23   23   24
CONECT   24   25
CONECT   25   26   95   96
CONECT   26   27   43   97
CONECT   27   28   98   99
CONECT   28   29
CONECT   29   30   30   31
CONECT   31   32  100  101
CONECT   32   33  102  103
CONECT   33   34  104  105
CONECT   34   35  106  107
CONECT   35   36  108  109
CONECT   36   37  110  111
CONECT   37   38  112  113
CONECT   38   39  114  115
CONECT   39   40  116  117
CONECT   40   41  118  119
CONECT   41   42  120  121
CONECT   42  122  123  124
CONECT   43   44
CONECT   44   45   45   46
CONECT   46   47  125  126
CONECT   47   48  127  128
CONECT   48   49  129  130
CONECT   49   50  131  132
CONECT   50   51  133  134
CONECT   51   52  135  136
CONECT   52   53  137  138
CONECT   53   54  139  140
CONECT   54   55  141  142
CONECT   55   56  143  144
CONECT   56   57  145  146
CONECT   57   58  147  148
CONECT   58   59  149  150
CONECT   59   60  151  152
CONECT   60   61  153  154
CONECT   61   62  155  156
CONECT   62   63  157  158
CONECT   63  159  160  161
END
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SMILES for HMDB0304740 (Theaflavin 3'-O-gallate)

[H][C@](COC(=O)CCCCCCCCCCCC)(COC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)OC(=O)CCCCCCCCCCCCCCCCCC
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INCHI for HMDB0304740 (Theaflavin 3'-O-gallate)

InChI=1S/C57H98O6/c1-4-7-10-13-16-19-22-24-26-28-29-30-32-33-35-38-41-44-47-50-56(59)62-53-54(52-61-55(58)49-46-43-40-37-21-18-15-12-9-6-3)63-57(60)51-48-45-42-39-36-34-31-27-25-23-20-17-14-11-8-5-2/h7,10,16,19,24,26,29-30,33,35,41,44,54H,4-6,8-9,11-15,17-18,20-23,25,27-28,31-32,34,36-40,42-43,45-53H2,1-3H3/b10-7-,19-16-,26-24-,30-29-,35-33-,44-41-/t54-/m0/s1
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View in JSmolView Stereo Labels
Synonyms
ValueSource
(2S)-2-(Nonadecanoyloxy)-3-(tridecanoyloxy)propyl (7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoic acidGenerator
Chemical FormulaC57H98O6
Average Molecular Weight879.405
Monoisotopic Molecular Weight878.736340876
IUPAC Name(2S)-2-(nonadecanoyloxy)-3-(tridecanoyloxy)propyl (4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate
Traditional Name(2S)-2-(nonadecanoyloxy)-3-(tridecanoyloxy)propyl (4Z,7Z,10Z,13Z,16Z,19Z)-docosa-4,7,10,13,16,19-hexaenoate
CAS Registry NumberNot Available
SMILES
[H][C@](COC(=O)CCCCCCCCCCCC)(COC(=O)CC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)OC(=O)CCCCCCCCCCCCCCCCCC
InChI Identifier
InChI=1S/C57H98O6/c1-4-7-10-13-16-19-22-24-26-28-29-30-32-33-35-38-41-44-47-50-56(59)62-53-54(52-61-55(58)49-46-43-40-37-21-18-15-12-9-6-3)63-57(60)51-48-45-42-39-36-34-31-27-25-23-20-17-14-11-8-5-2/h7,10,16,19,24,26,29-30,33,35,41,44,54H,4-6,8-9,11-15,17-18,20-23,25,27-28,31-32,34,36-40,42-43,45-53H2,1-3H3/b10-7-,19-16-,26-24-,30-29-,35-33-,44-41-/t54-/m0/s1
InChI KeyRNYPYOLUVPCWFW-WXUCRGGPSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triacylglycerols. These are glycerides consisting of three fatty acid chains covalently bonded to a glycerol molecule through ester linkages.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassGlycerolipids
Sub ClassTriradylcglycerols
Direct ParentTriacylglycerols
Alternative Parents
Substituents
  • Triacyl-sn-glycerol
  • Tricarboxylic acid or derivatives
  • Fatty acid ester
  • Fatty acyl
  • Carboxylic acid ester
  • Carboxylic acid derivative
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Source
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP10.77ALOGPS
logP19.42ChemAxon
logS-8ALOGPS
pKa (Strongest Basic)-6.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area78.9 ŲChemAxon
Rotatable Bond Count50ChemAxon
Refractivity275.6 m³·mol⁻¹ChemAxon
Polarizability113.73 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
AllCCS[M+H]+315.91932859911
AllCCS[M+H-H2O]+315.93932859911
AllCCS[M+Na]+315.85732859911
AllCCS[M+NH4]+315.87532859911
AllCCS[M-H]-279.23432859911
AllCCS[M+Na-2H]-286.6232859911
AllCCS[M+HCOO]-294.67732859911
DeepCCS[M+H]+311.81230932474
DeepCCS[M-H]-309.98730932474
DeepCCS[M-2H]-343.22930932474
DeepCCS[M+Na]+317.41730932474

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 10V, Positive-QTOFsplash10-01sj-0495062050-b11b7410c4f2efc3ed082019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 20V, Positive-QTOFsplash10-03ea-0494021120-2f1b866553c75412745a2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 40V, Positive-QTOFsplash10-02as-0492000310-1d8738b1a803c004ef022019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 10V, Negative-QTOFsplash10-004j-0489030020-b9df5ab54706887c86dc2019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 20V, Negative-QTOFsplash10-01ta-0389010000-9af1dc665672fa533b972019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 40V, Negative-QTOFsplash10-06vj-3295000000-4c96ade838222b7d2e892019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 10V, Positive-QTOFsplash10-000i-0000000090-5099cbb5f7bc6957ba4b2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 20V, Positive-QTOFsplash10-000i-0000000090-5099cbb5f7bc6957ba4b2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 40V, Positive-QTOFsplash10-000i-0009099090-e1ed7dfb5462f2c960cf2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 10V, Positive-QTOFsplash10-0udi-0000000009-cfe884cde7363d5f41ad2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 20V, Positive-QTOFsplash10-0udi-0000000009-cfe884cde7363d5f41ad2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 40V, Positive-QTOFsplash10-0udi-0000000009-cfe884cde7363d5f41ad2021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 10V, Positive-QTOFsplash10-0002-0000000090-b1fb8423285a4927f1c62021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 20V, Positive-QTOFsplash10-0002-0000000090-b1fb8423285a4927f1c62021-10-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Theaflavin 3'-O-gallate 40V, Positive-QTOFsplash10-0fur-0000094030-d84edb06f6c167437c962021-10-22Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available