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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:39:30 UTC
Update Date2022-03-07 02:52:44 UTC
HMDB IDHMDB0030868
Secondary Accession Numbers
  • HMDB30868
Metabolite Identification
Common NameCitreoviridin A
DescriptionCitreoviridin A belongs to the class of organic compounds known as pyranones and derivatives. Pyranones and derivatives are compounds containing a pyran ring which bears a ketone. Based on a literature review very few articles have been published on Citreoviridin A.
Structure
Data?1563862050
Synonyms
ValueSource
CitreoviridineHMDB
Citreoviridine aHMDB
Chemical FormulaC23H30O6
Average Molecular Weight402.4807
Monoisotopic Molecular Weight402.204238692
IUPAC Name6-[(1Z,3E,5Z,7E)-8-(3,4-dihydroxy-2,4,5-trimethyloxolan-2-yl)-7-methylocta-1,3,5,7-tetraen-1-yl]-4-methoxy-5-methyl-2H-pyran-2-one
Traditional Name6-[(1Z,3E,5Z,7E)-8-(3,4-dihydroxy-2,4,5-trimethyloxolan-2-yl)-7-methylocta-1,3,5,7-tetraen-1-yl]-4-methoxy-5-methylpyran-2-one
CAS Registry Number25425-12-1
SMILES
COC1=CC(=O)OC(\C=C/C=C/C=C\C(\C)=C\C2(C)OC(C)C(C)(O)C2O)=C1C
InChI Identifier
InChI=1S/C23H30O6/c1-15(14-22(4)21(25)23(5,26)17(3)29-22)11-9-7-8-10-12-18-16(2)19(27-6)13-20(24)28-18/h7-14,17,21,25-26H,1-6H3/b8-7+,11-9-,12-10-,15-14+
InChI KeyJLSVDPQAIKFBTO-MAUVYNLPSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as pyranones and derivatives. Pyranones and derivatives are compounds containing a pyran ring which bears a ketone.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPyrans
Sub ClassPyranones and derivatives
Direct ParentPyranones and derivatives
Alternative Parents
Substituents
  • Alkyl aryl ether
  • Pyranone
  • Heteroaromatic compound
  • Vinylogous ester
  • Tetrahydrofuran
  • Tertiary alcohol
  • 1,2-diol
  • Lactone
  • Secondary alcohol
  • Dialkyl ether
  • Ether
  • Oxacycle
  • Alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organic oxide
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point107 - 111 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0094 g/LALOGPS
logP3.89ALOGPS
logP2.46ChemAxon
logS-4.6ALOGPS
pKa (Strongest Acidic)12.6ChemAxon
pKa (Strongest Basic)-3.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area85.22 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity118.01 m³·mol⁻¹ChemAxon
Polarizability44.14 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+198.16431661259
DarkChem[M-H]-197.81331661259
DeepCCS[M+H]+198.57230932474
DeepCCS[M-H]-196.21430932474
DeepCCS[M-2H]-229.40230932474
DeepCCS[M+Na]+204.66530932474
AllCCS[M+H]+202.132859911
AllCCS[M+H-H2O]+199.232859911
AllCCS[M+NH4]+204.932859911
AllCCS[M+Na]+205.732859911
AllCCS[M-H]-202.332859911
AllCCS[M+Na-2H]-203.732859911
AllCCS[M+HCOO]-205.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Citreoviridin ACOC1=CC(=O)OC(\C=C/C=C/C=C\C(\C)=C\C2(C)OC(C)C(C)(O)C2O)=C1C4694.0Standard polar33892256
Citreoviridin ACOC1=CC(=O)OC(\C=C/C=C/C=C\C(\C)=C\C2(C)OC(C)C(C)(O)C2O)=C1C3183.6Standard non polar33892256
Citreoviridin ACOC1=CC(=O)OC(\C=C/C=C/C=C\C(\C)=C\C2(C)OC(C)C(C)(O)C2O)=C1C3461.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Citreoviridin A,1TMS,isomer #1COC1=CC(=O)OC(/C=C\C=C\C=C/C(C)=C/C2(C)OC(C)C(C)(O[Si](C)(C)C)C2O)=C1C3312.7Semi standard non polar33892256
Citreoviridin A,1TMS,isomer #2COC1=CC(=O)OC(/C=C\C=C\C=C/C(C)=C/C2(C)OC(C)C(C)(O)C2O[Si](C)(C)C)=C1C3316.0Semi standard non polar33892256
Citreoviridin A,2TMS,isomer #1COC1=CC(=O)OC(/C=C\C=C\C=C/C(C)=C/C2(C)OC(C)C(C)(O[Si](C)(C)C)C2O[Si](C)(C)C)=C1C3325.8Semi standard non polar33892256
Citreoviridin A,1TBDMS,isomer #1COC1=CC(=O)OC(/C=C\C=C\C=C/C(C)=C/C2(C)OC(C)C(C)(O[Si](C)(C)C(C)(C)C)C2O)=C1C3549.8Semi standard non polar33892256
Citreoviridin A,1TBDMS,isomer #2COC1=CC(=O)OC(/C=C\C=C\C=C/C(C)=C/C2(C)OC(C)C(C)(O)C2O[Si](C)(C)C(C)(C)C)=C1C3555.5Semi standard non polar33892256
Citreoviridin A,2TBDMS,isomer #1COC1=CC(=O)OC(/C=C\C=C\C=C/C(C)=C/C2(C)OC(C)C(C)(O[Si](C)(C)C(C)(C)C)C2O[Si](C)(C)C(C)(C)C)=C1C3777.6Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Citreoviridin A GC-MS (Non-derivatized) - 70eV, Positivesplash10-0096-9016000000-b2c7ef5eef4fdb904df82017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Citreoviridin A GC-MS (2 TMS) - 70eV, Positivesplash10-00ar-9445470000-cc2b9d11d6fc21ed84272017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Citreoviridin A GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 10V, Positive-QTOFsplash10-0udi-0488900000-e87409287f4ef8a37f662017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 20V, Positive-QTOFsplash10-0k9j-1972000000-74575cd655127a9fa9622017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 40V, Positive-QTOFsplash10-0gbl-9731000000-454c33b3d5bef51e1b492017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 10V, Negative-QTOFsplash10-0udi-1115900000-00bc1bd0721f73dc41e92017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 20V, Negative-QTOFsplash10-0k96-5319300000-9f359e74e3f819b4253b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 40V, Negative-QTOFsplash10-0076-9355000000-ef59910e5aeb8a874d372017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 10V, Positive-QTOFsplash10-0f79-0294300000-0a92733e5f40507d378e2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 20V, Positive-QTOFsplash10-015i-0972000000-0861c8caec9bec9e8f1a2021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 40V, Positive-QTOFsplash10-066r-2910000000-da5af5cb04090a42f8f22021-09-21Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 10V, Negative-QTOFsplash10-0udi-0115900000-c3b97e243081be59d9062021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 20V, Negative-QTOFsplash10-0udi-0039100000-35cbe6f6f3980d87434f2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Citreoviridin A 40V, Negative-QTOFsplash10-0592-8697000000-e09c024db27e862549432021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB002828
KNApSAcK IDC00055193
Chemspider ID35013276
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound45934448
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .