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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:51:28 UTC
Update Date2022-03-07 02:53:58 UTC
HMDB IDHMDB0034073
Secondary Accession Numbers
  • HMDB34073
Metabolite Identification
Common NameVicine
DescriptionVicine belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond. Vicine is found, on average, in the highest concentration within broad beans (Vicia faba). Vicine has also been detected, but not quantified in, bitter gourds (Momordica charantia) and pulses. This could make vicine a potential biomarker for the consumption of these foods. Based on a literature review a significant number of articles have been published on Vicine.
Structure
Thumb
Synonyms
ValueSource
2,6-diamino-5-(beta-D-Glucopyranosyloxy)-4(1H)-pyrimidinoneHMDB
Divicine, 5-beta -D-glucopyranosideHMDB
Divicine, 5-beta-D-glucopyranosideHMDB
Divicine-5beta-D-glucopyranosideHMDB
Vicine?HMDB
ViciosideHMDB
Chemical FormulaC10H16N4O7
Average Molecular Weight304.2566
Monoisotopic Molecular Weight304.101898886
IUPAC Name2-[(2,4-diamino-6-hydroxypyrimidin-5-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
Traditional Name2-[(2,4-diamino-6-hydroxypyrimidin-5-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
CAS Registry Number152-93-2
SMILES
NC1=NC(O)=C(OC2OC(CO)C(O)C(O)C2O)C(N)=N1
InChI Identifier
InChI=1S/C10H16N4O7/c11-7-6(8(19)14-10(12)13-7)21-9-5(18)4(17)3(16)2(1-15)20-9/h2-5,9,15-18H,1H2,(H5,11,12,13,14,19)
InChI KeyKGNGTSCIQCLKEH-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as o-glycosyl compounds. These are glycoside in which a sugar group is bonded through one carbon to another group via a O-glycosidic bond.
KingdomOrganic compounds
Super ClassOrganic oxygen compounds
ClassOrganooxygen compounds
Sub ClassCarbohydrates and carbohydrate conjugates
Direct ParentO-glycosyl compounds
Alternative Parents
Substituents
  • Hexose monosaccharide
  • O-glycosyl compound
  • Aminopyrimidine
  • Pyrimidone
  • Hydropyrimidine
  • Monosaccharide
  • Oxane
  • Pyrimidine
  • Heteroaromatic compound
  • Vinylogous amide
  • Secondary alcohol
  • Acetal
  • Oxacycle
  • Azacycle
  • Polyol
  • Organoheterocyclic compound
  • Organonitrogen compound
  • Alcohol
  • Hydrocarbon derivative
  • Organic oxide
  • Organopnictogen compound
  • Amine
  • Organic nitrogen compound
  • Primary alcohol
  • Primary amine
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point243 - 244 °CNot Available
Boiling PointNot AvailableNot Available
Water Solubility10 mg/mLNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
Predicted Chromatographic Properties
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012329
KNApSAcK IDC00001515
Chemspider ID229993
KEGG Compound IDC08437
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkVicine
METLIN IDNot Available
PubChem Compound261944
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .