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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:16:33 UTC
Update Date2022-03-07 02:54:27 UTC
HMDB IDHMDB0035315
Secondary Accession Numbers
  • HMDB35315
Metabolite Identification
Common NameGanodermatriol
DescriptionGanodermatriol belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review very few articles have been published on Ganodermatriol.
Structure
Data?1563862699
Synonyms
ValueSource
Lanosta-7,9(11),24-triene-3,26,27-triolMeSH
(3beta)-Lanosta-7,9(11),24-triene-3,26,27-triolHMDB
GanodermatriolMeSH
Chemical FormulaC30H48O3
Average Molecular Weight456.7003
Monoisotopic Molecular Weight456.360345402
IUPAC Name2-(4-{5-hydroxy-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadeca-1(17),9-dien-14-yl}pentylidene)propane-1,3-diol
Traditional Name2-(4-{5-hydroxy-2,6,6,11,15-pentamethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadeca-1(17),9-dien-14-yl}pentylidene)propane-1,3-diol
CAS Registry Number105300-28-5
SMILES
CC(CCC=C(CO)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O)CCC4(C)C3=CCC12C
InChI Identifier
InChI=1S/C30H48O3/c1-20(8-7-9-21(18-31)19-32)22-12-16-30(6)24-10-11-25-27(2,3)26(33)14-15-28(25,4)23(24)13-17-29(22,30)5/h9-10,13,20,22,25-26,31-33H,7-8,11-12,14-19H2,1-6H3
InChI KeyLIJZGBVDQCTWLG-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • 26-hydroxysteroid
  • Dihydroxy bile acid, alcohol, or derivatives
  • Hydroxy bile acid, alcohol, or derivatives
  • Cholane-skeleton
  • Bile acid, alcohol, or derivatives
  • 3-hydroxy-delta-7-steroid
  • 3-hydroxysteroid
  • 14-alpha-methylsteroid
  • Hydroxysteroid
  • 3-beta-hydroxysteroid
  • Delta-7-steroid
  • Steroid
  • Fatty alcohol
  • Fatty acyl
  • Cyclic alcohol
  • Secondary alcohol
  • Hydrocarbon derivative
  • Alcohol
  • Organooxygen compound
  • Primary alcohol
  • Organic oxygen compound
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point180 - 190 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0032 g/LALOGPS
logP6.42ALOGPS
logP4.78ChemAxon
logS-5.2ALOGPS
pKa (Strongest Acidic)14.8ChemAxon
pKa (Strongest Basic)-0.78ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area60.69 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity139.21 m³·mol⁻¹ChemAxon
Polarizability55.4 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+208.56231661259
DarkChem[M-H]-202.3231661259
DeepCCS[M-2H]-245.75330932474
DeepCCS[M+Na]+220.98830932474
AllCCS[M+H]+215.032859911
AllCCS[M+H-H2O]+213.332859911
AllCCS[M+NH4]+216.732859911
AllCCS[M+Na]+217.132859911
AllCCS[M-H]-213.432859911
AllCCS[M+Na-2H]-215.832859911
AllCCS[M+HCOO]-218.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
GanodermatriolCC(CCC=C(CO)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O)CCC4(C)C3=CCC12C3738.7Standard polar33892256
GanodermatriolCC(CCC=C(CO)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O)CCC4(C)C3=CCC12C3620.5Standard non polar33892256
GanodermatriolCC(CCC=C(CO)CO)C1CCC2(C)C3=CCC4C(C)(C)C(O)CCC4(C)C3=CCC12C4016.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Ganodermatriol,1TMS,isomer #1CC(CCC=C(CO)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O)C4(C)C)C3=CCC12C3809.1Semi standard non polar33892256
Ganodermatriol,1TMS,isomer #2CC(CCC=C(CO)CO)C1CCC2(C)C3=CCC4C(C)(CCC(O[Si](C)(C)C)C4(C)C)C3=CCC12C3781.9Semi standard non polar33892256
Ganodermatriol,2TMS,isomer #1CC(CCC=C(CO[Si](C)(C)C)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O)C4(C)C)C3=CCC12C3814.2Semi standard non polar33892256
Ganodermatriol,2TMS,isomer #2CC(CCC=C(CO)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O[Si](C)(C)C)C4(C)C)C3=CCC12C3756.7Semi standard non polar33892256
Ganodermatriol,3TMS,isomer #1CC(CCC=C(CO[Si](C)(C)C)CO[Si](C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O[Si](C)(C)C)C4(C)C)C3=CCC12C3729.0Semi standard non polar33892256
Ganodermatriol,1TBDMS,isomer #1CC(CCC=C(CO)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O)C4(C)C)C3=CCC12C4040.2Semi standard non polar33892256
Ganodermatriol,1TBDMS,isomer #2CC(CCC=C(CO)CO)C1CCC2(C)C3=CCC4C(C)(CCC(O[Si](C)(C)C(C)(C)C)C4(C)C)C3=CCC12C3995.4Semi standard non polar33892256
Ganodermatriol,2TBDMS,isomer #1CC(CCC=C(CO[Si](C)(C)C(C)(C)C)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O)C4(C)C)C3=CCC12C4279.9Semi standard non polar33892256
Ganodermatriol,2TBDMS,isomer #2CC(CCC=C(CO)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O[Si](C)(C)C(C)(C)C)C4(C)C)C3=CCC12C4208.1Semi standard non polar33892256
Ganodermatriol,3TBDMS,isomer #1CC(CCC=C(CO[Si](C)(C)C(C)(C)C)CO[Si](C)(C)C(C)(C)C)C1CCC2(C)C3=CCC4C(C)(CCC(O[Si](C)(C)C(C)(C)C)C4(C)C)C3=CCC12C4409.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermatriol GC-MS (Non-derivatized) - 70eV, Positivesplash10-002f-0104900000-9ab655b3d83140c106272017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermatriol GC-MS (3 TMS) - 70eV, Positivesplash10-0a4i-1021119000-c7aaa772c003abf0c1b52017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Ganodermatriol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 10V, Negative-QTOFsplash10-0a4i-0000900000-d2716bdcfaf49f31292f2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 20V, Negative-QTOFsplash10-0a4i-0000900000-fb89d1a8969ca0105b3f2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 40V, Negative-QTOFsplash10-0a4i-2003900000-f6c67d1f5228a5f3e4da2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 10V, Negative-QTOFsplash10-014i-0000900000-c11fcba9114dd8425f3f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 20V, Negative-QTOFsplash10-0a4i-0000900000-7ba9c15f2952626a9a742021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 40V, Negative-QTOFsplash10-0aor-0105900000-dc0fafef29061156e1a82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 10V, Positive-QTOFsplash10-052r-0001900000-00fc799ac741b690c7c82015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 20V, Positive-QTOFsplash10-0079-2107900000-c84be638a6781af83f302015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 40V, Positive-QTOFsplash10-0a4r-5319400000-4bacc28f49aa3ac9f3242015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 10V, Positive-QTOFsplash10-08fr-2902100000-3e436b741eb2dd1198a32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 20V, Positive-QTOFsplash10-000t-9578700000-a31e8a96602d127011132021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Ganodermatriol 40V, Positive-QTOFsplash10-08mj-9874000000-e985a1784b803444208d2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDC00023869
Chemspider ID19989689
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21124247
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.