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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 21:52:41 UTC
Update Date2022-03-07 02:55:02 UTC
HMDB IDHMDB0036710
Secondary Accession Numbers
  • HMDB36710
Metabolite Identification
Common NameYucalexin B16
DescriptionYucalexin B16 belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units. Yucalexin B16 is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862913
Synonyms
ValueSource
(Phenylamino)-N-(2-phenylethyl)carboxamideHMDB
1-Phenyl-3-(2-phenylethyl)ureaHMDB
ent-15-Beyerene-3,12-dioneHMDB
Chemical FormulaC20H28O2
Average Molecular Weight300.4351
Monoisotopic Molecular Weight300.20893014
IUPAC Name5,5,9,13-tetramethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-14-ene-6,12-dione
Traditional Name5,5,9,13-tetramethyltetracyclo[11.2.1.0¹,¹⁰.0⁴,⁹]hexadec-14-ene-6,12-dione
CAS Registry Number88048-00-4
SMILES
CC12CC3(CCC4C(C)(C)C(=O)CCC4(C)C3CC1=O)C=C2
InChI Identifier
InChI=1S/C20H28O2/c1-17(2)13-5-8-20-10-9-18(3,12-20)16(22)11-14(20)19(13,4)7-6-15(17)21/h9-10,13-14H,5-8,11-12H2,1-4H3
InChI KeyZUZSPZMYVHKHKO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as diterpenoids. These are terpene compounds formed by four isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentDiterpenoids
Alternative Parents
Substituents
  • Diterpenoid
  • Beyerane diterpenoid
  • Cyclic ketone
  • Ketone
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point70 - 73 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0047 g/LALOGPS
logP3.22ALOGPS
logP4.28ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)19.35ChemAxon
pKa (Strongest Basic)-7.2ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area34.14 ŲChemAxon
Rotatable Bond Count0ChemAxon
Refractivity88.3 m³·mol⁻¹ChemAxon
Polarizability34.77 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+169.45731661259
DarkChem[M-H]-164.9331661259
DeepCCS[M-2H]-211.37830932474
DeepCCS[M+Na]+186.94330932474
AllCCS[M+H]+174.532859911
AllCCS[M+H-H2O]+171.432859911
AllCCS[M+NH4]+177.332859911
AllCCS[M+Na]+178.132859911
AllCCS[M-H]-183.232859911
AllCCS[M+Na-2H]-183.332859911
AllCCS[M+HCOO]-183.532859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Yucalexin B16CC12CC3(CCC4C(C)(C)C(=O)CCC4(C)C3CC1=O)C=C22736.7Standard polar33892256
Yucalexin B16CC12CC3(CCC4C(C)(C)C(=O)CCC4(C)C3CC1=O)C=C22315.0Standard non polar33892256
Yucalexin B16CC12CC3(CCC4C(C)(C)C(=O)CCC4(C)C3CC1=O)C=C22428.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Yucalexin B16,1TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3CC1=O)C22484.8Semi standard non polar33892256
Yucalexin B16,1TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3CC1=O)C22358.5Standard non polar33892256
Yucalexin B16,1TMS,isomer #2CC12C=CC3(CCC4C(C)(C)C(=O)CCC4(C)C3C=C1O[Si](C)(C)C)C22531.0Semi standard non polar33892256
Yucalexin B16,1TMS,isomer #2CC12C=CC3(CCC4C(C)(C)C(=O)CCC4(C)C3C=C1O[Si](C)(C)C)C22347.3Standard non polar33892256
Yucalexin B16,2TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3C=C1O[Si](C)(C)C)C22556.9Semi standard non polar33892256
Yucalexin B16,2TMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C)=CCC4(C)C3C=C1O[Si](C)(C)C)C22366.5Standard non polar33892256
Yucalexin B16,1TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CC1=O)C22734.3Semi standard non polar33892256
Yucalexin B16,1TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3CC1=O)C22555.2Standard non polar33892256
Yucalexin B16,1TBDMS,isomer #2CC12C=CC3(CCC4C(C)(C)C(=O)CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C22780.9Semi standard non polar33892256
Yucalexin B16,1TBDMS,isomer #2CC12C=CC3(CCC4C(C)(C)C(=O)CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C22539.4Standard non polar33892256
Yucalexin B16,2TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C23062.5Semi standard non polar33892256
Yucalexin B16,2TBDMS,isomer #1CC12C=CC3(CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)=CCC4(C)C3C=C1O[Si](C)(C)C(C)(C)C)C22683.9Standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Yucalexin B16 GC-MS (Non-derivatized) - 70eV, Positivesplash10-05g0-0390000000-f931d464afa6f95c195c2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Yucalexin B16 GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 10V, Positive-QTOFsplash10-0udi-0159000000-8f4638a7f8ee4661aabd2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 20V, Positive-QTOFsplash10-0ue9-0392000000-674ca6959fab3f3fdb712016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 40V, Positive-QTOFsplash10-00ku-6690000000-e824ad0293eecd50d7c62016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 10V, Negative-QTOFsplash10-0002-0090000000-3f3c3d1d9ad7fd40c8752016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 20V, Negative-QTOFsplash10-0002-0090000000-2bc6f68ed4faaf9aadfb2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 40V, Negative-QTOFsplash10-00lu-5090000000-50542a8d38bd9c33532c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 10V, Positive-QTOFsplash10-0ue9-0089000000-179523978796a36dfcd12021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 20V, Positive-QTOFsplash10-0ul1-2392000000-de5e863db464fa2d0a922021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 40V, Positive-QTOFsplash10-003j-2950000000-1fdeb513d49bfdc074b62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 10V, Negative-QTOFsplash10-0002-0090000000-344a11f406f20d02412c2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 20V, Negative-QTOFsplash10-0002-0090000000-841ee27c1534d16d305e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Yucalexin B16 40V, Negative-QTOFsplash10-0002-0090000000-9b689346ea56ddd333a12021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB015646
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14191181
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.