Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 00:35:44 UTC
Update Date2022-03-07 02:56:07 UTC
HMDB IDHMDB0039212
Secondary Accession Numbers
  • HMDB39212
Metabolite Identification
Common NameSoyasapogenol F
DescriptionSoyasapogenol F belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units. Based on a literature review a small amount of articles have been published on Soyasapogenol F.
Structure
Data?1563863333
Synonyms
ValueSource
Soyasapogenol b1HMDB
Urol (pharmaceutical)HMDB
Chemical FormulaC30H50O3
Average Molecular Weight458.7162
Monoisotopic Molecular Weight458.375995466
IUPAC Name(3S,4S,6aR,6bS,8aR,9R,14aR,14bR)-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4,4a,5,6,6a,6b,7,8,8a,9,10,11,12,13,14,14a,14b-icosahydropicene-3,9-diol
Traditional Name(3S,4S,6aR,6bS,8aR,9R,14aR,14bR)-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,13,14,14a-tetradecahydropicene-3,9-diol
CAS Registry Number97503-03-2
SMILES
CC1(C)C[C@@H](O)[C@]2(C)CC[C@]3(C)C(CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO)C5CC[C@@]34C)=C2C1
InChI Identifier
InChI=1S/C30H50O3/c1-25(2)16-20-19-8-9-22-27(4)12-11-23(32)28(5,18-31)21(27)10-13-30(22,7)29(19,6)15-14-26(20,3)24(33)17-25/h21-24,31-33H,8-18H2,1-7H3/t21?,22-,23+,24-,26-,27+,28-,29-,30-/m1/s1
InChI KeyFAQHDLWADGCEMS-PLKKNJIASA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as triterpenoids. These are terpene molecules containing six isoprene units.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassTriterpenoids
Direct ParentTriterpenoids
Alternative Parents
Substituents
  • Triterpenoid
  • Steroid
  • Cyclic alcohol
  • Secondary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0054 g/LALOGPS
logP5.28ALOGPS
logP4.85ChemAxon
logS-4.9ALOGPS
pKa (Strongest Acidic)14.49ChemAxon
pKa (Strongest Basic)-0.48ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area60.69 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity134.93 m³·mol⁻¹ChemAxon
Polarizability55.69 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+205.40831661259
DarkChem[M-H]-200.27631661259
DeepCCS[M-2H]-255.08730932474
DeepCCS[M+Na]+229.41530932474
AllCCS[M+H]+217.432859911
AllCCS[M+H-H2O]+215.832859911
AllCCS[M+NH4]+218.932859911
AllCCS[M+Na]+219.432859911
AllCCS[M-H]-211.132859911
AllCCS[M+Na-2H]-213.332859911
AllCCS[M+HCOO]-215.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Soyasapogenol FCC1(C)C[C@@H](O)[C@]2(C)CC[C@]3(C)C(CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO)C5CC[C@@]34C)=C2C12579.2Standard polar33892256
Soyasapogenol FCC1(C)C[C@@H](O)[C@]2(C)CC[C@]3(C)C(CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO)C5CC[C@@]34C)=C2C13678.0Standard non polar33892256
Soyasapogenol FCC1(C)C[C@@H](O)[C@]2(C)CC[C@]3(C)C(CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO)C5CC[C@@]34C)=C2C13934.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Soyasapogenol F,1TMS,isomer #1CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C)C13713.6Semi standard non polar33892256
Soyasapogenol F,1TMS,isomer #2CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C)[C@](C)(CO)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O)C13749.2Semi standard non polar33892256
Soyasapogenol F,1TMS,isomer #3CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO[Si](C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O)C13721.0Semi standard non polar33892256
Soyasapogenol F,2TMS,isomer #1CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C)[C@](C)(CO)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C)C13693.3Semi standard non polar33892256
Soyasapogenol F,2TMS,isomer #2CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO[Si](C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C)C13645.7Semi standard non polar33892256
Soyasapogenol F,2TMS,isomer #3CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C)[C@](C)(CO[Si](C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O)C13690.6Semi standard non polar33892256
Soyasapogenol F,3TMS,isomer #1CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C)[C@](C)(CO[Si](C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C)C13643.5Semi standard non polar33892256
Soyasapogenol F,1TBDMS,isomer #1CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C(C)(C)C)C13944.3Semi standard non polar33892256
Soyasapogenol F,1TBDMS,isomer #2CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C(C)(C)C)[C@](C)(CO)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O)C13995.7Semi standard non polar33892256
Soyasapogenol F,1TBDMS,isomer #3CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO[Si](C)(C)C(C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O)C13972.9Semi standard non polar33892256
Soyasapogenol F,2TBDMS,isomer #1CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C(C)(C)C)[C@](C)(CO)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C(C)(C)C)C14137.4Semi standard non polar33892256
Soyasapogenol F,2TBDMS,isomer #2CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O)[C@](C)(CO[Si](C)(C)C(C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C(C)(C)C)C14095.1Semi standard non polar33892256
Soyasapogenol F,2TBDMS,isomer #3CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C(C)(C)C)[C@](C)(CO[Si](C)(C)C(C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O)C14158.8Semi standard non polar33892256
Soyasapogenol F,3TBDMS,isomer #1CC1(C)CC2=C3CC[C@@H]4[C@@]5(C)CC[C@H](O[Si](C)(C)C(C)(C)C)[C@](C)(CO[Si](C)(C)C(C)(C)C)C5CC[C@@]4(C)[C@]3(C)CC[C@@]2(C)[C@H](O[Si](C)(C)C(C)(C)C)C14288.5Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Soyasapogenol F GC-MS (Non-derivatized) - 70eV, Positivesplash10-002f-0002900000-013fa4dc01c928c1e4732017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Soyasapogenol F GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Soyasapogenol F GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 10V, Positive-QTOFsplash10-006x-0000900000-691aa10c5e2e1fa5880f2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 20V, Positive-QTOFsplash10-00dl-0122900000-c5880d10a08d75c8257d2016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 40V, Positive-QTOFsplash10-0ukc-0498500000-3dc08319b1e147347e252016-08-02Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 10V, Negative-QTOFsplash10-0a4i-0000900000-a5a86c873d761bb6c6d72016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 20V, Negative-QTOFsplash10-0a4r-0000900000-7abe942dd3b5df5f47db2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 40V, Negative-QTOFsplash10-08i0-0001900000-fa02e5e65a2a385778db2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 10V, Positive-QTOFsplash10-0abc-0000900000-dd67911f882a93a4e8952021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 20V, Positive-QTOFsplash10-05fu-0190700000-b746884807cbcaef033d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 40V, Positive-QTOFsplash10-00dl-1941000000-abe22d0073051de22e2f2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 10V, Negative-QTOFsplash10-0a4i-0000900000-2e8eabc98b7e3f409adf2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 20V, Negative-QTOFsplash10-0a4i-0000900000-141e8ac5a766162765b82021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Soyasapogenol F 40V, Negative-QTOFsplash10-0a4i-0000900000-f8639f9fea9ec8bfa2682021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB018743
KNApSAcK IDC00053794
Chemspider ID155764
KEGG Compound IDC17421
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound178960
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.