Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:17:29 UTC
Update Date2022-03-07 02:56:20 UTC
HMDB IDHMDB0039752
Secondary Accession Numbers
  • HMDB39752
Metabolite Identification
Common Name3beta-Cycloartane-3,25-diol
Description3beta-Cycloartane-3,25-diol belongs to the class of organic compounds known as cycloartanols and derivatives. These are steroids containing a cycloartanol moiety. Based on a literature review a significant number of articles have been published on 3beta-Cycloartane-3,25-diol.
Structure
Thumb
Synonyms
ValueSource
3b-Cycloartane-3,25-diolGenerator
3Β-cycloartane-3,25-diolGenerator
Chemical FormulaC30H52O2
Average Molecular Weight444.7327
Monoisotopic Molecular Weight444.396730908
IUPAC Name15-(6-hydroxy-6-methylheptan-2-yl)-7,7,12,16-tetramethylpentacyclo[9.7.0.0¹,³.0³,⁸.0¹²,¹⁶]octadecan-6-ol
Traditional Name15-(6-hydroxy-6-methylheptan-2-yl)-7,7,12,16-tetramethylpentacyclo[9.7.0.0¹,³.0³,⁸.0¹²,¹⁶]octadecan-6-ol
CAS Registry Number26525-84-8
SMILES
CC(CCCC(C)(C)O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C
InChI Identifier
InChI=1S/C30H52O2/c1-20(9-8-14-25(2,3)32)21-12-15-28(7)23-11-10-22-26(4,5)24(31)13-16-29(22)19-30(23,29)18-17-27(21,28)6/h20-24,31-32H,8-19H2,1-7H3
InChI KeyVUMUFIITBXMVIJ-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cycloartanols and derivatives. These are steroids containing a cycloartanol moiety.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassCycloartanols and derivatives
Direct ParentCycloartanols and derivatives
Alternative Parents
Substituents
  • Cycloartanol-skeleton
  • Triterpenoid
  • Cycloartane-skeleton
  • 9b,19-cyclo-lanostane-skeleton
  • 25-hydroxysteroid
  • Hydroxysteroid
  • 3-hydroxysteroid
  • Tertiary alcohol
  • Cyclic alcohol
  • Secondary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility5.6e-05 g/LALOGPS
logP6.07ALOGPS
logP6.48ChemAxon
logS-6.9ALOGPS
pKa (Strongest Acidic)18.53ChemAxon
pKa (Strongest Basic)-0.7ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area40.46 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity133.02 m³·mol⁻¹ChemAxon
Polarizability56.31 ųChemAxon
Number of Rings5ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+202.16831661259
DarkChem[M-H]-197.80231661259
DeepCCS[M-2H]-252.51630932474
DeepCCS[M+Na]+227.74430932474
AllCCS[M+H]+216.332859911
AllCCS[M+H-H2O]+214.732859911
AllCCS[M+NH4]+217.832859911
AllCCS[M+Na]+218.232859911
AllCCS[M-H]-209.332859911
AllCCS[M+Na-2H]-211.832859911
AllCCS[M+HCOO]-214.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3beta-Cycloartane-3,25-diolCC(CCCC(C)(C)O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C2773.4Standard polar33892256
3beta-Cycloartane-3,25-diolCC(CCCC(C)(C)O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C3450.5Standard non polar33892256
3beta-Cycloartane-3,25-diolCC(CCCC(C)(C)O)C1CCC2(C)C3CCC4C5(CC35CCC12C)CCC(O)C4(C)C3587.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3beta-Cycloartane-3,25-diol,1TMS,isomer #1CC(CCCC(C)(C)O[Si](C)(C)C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C3658.1Semi standard non polar33892256
3beta-Cycloartane-3,25-diol,1TMS,isomer #2CC(CCCC(C)(C)O)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C)CCC45CC35CCC12C3603.7Semi standard non polar33892256
3beta-Cycloartane-3,25-diol,2TMS,isomer #1CC(CCCC(C)(C)O[Si](C)(C)C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C)CCC45CC35CCC12C3681.9Semi standard non polar33892256
3beta-Cycloartane-3,25-diol,1TBDMS,isomer #1CC(CCCC(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3CCC4C(C)(C)C(O)CCC45CC35CCC12C3871.6Semi standard non polar33892256
3beta-Cycloartane-3,25-diol,1TBDMS,isomer #2CC(CCCC(C)(C)O)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC45CC35CCC12C3825.4Semi standard non polar33892256
3beta-Cycloartane-3,25-diol,2TBDMS,isomer #1CC(CCCC(C)(C)O[Si](C)(C)C(C)(C)C)C1CCC2(C)C3CCC4C(C)(C)C(O[Si](C)(C)C(C)(C)C)CCC45CC35CCC12C4116.3Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3beta-Cycloartane-3,25-diol GC-MS (Non-derivatized) - 70eV, Positivesplash10-0ar0-5126900000-a7e71b03277f869feb0f2017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3beta-Cycloartane-3,25-diol GC-MS (2 TMS) - 70eV, Positivesplash10-00di-4212390000-b3db2536fa5e00475a1a2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3beta-Cycloartane-3,25-diol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 10V, Positive-QTOFsplash10-056r-0001900000-2f8529a35929aad8f1272016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 20V, Positive-QTOFsplash10-05r0-1008900000-a2e0869abd5363a4d9e62016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 40V, Positive-QTOFsplash10-0n2i-1029100000-86c62fa3b6472361137b2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 10V, Negative-QTOFsplash10-0006-0000900000-940e45e8f109b24b4ca82016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 20V, Negative-QTOFsplash10-002f-0001900000-57b0bf5a40c656c40c442016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 40V, Negative-QTOFsplash10-056r-2003900000-a640ff594ba4340b53b92016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 10V, Negative-QTOFsplash10-0006-0000900000-3701998aaafee1bdb6092021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 20V, Negative-QTOFsplash10-0006-0000900000-9ee17dd2aa27c49000fb2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 40V, Negative-QTOFsplash10-0006-0000900000-a0a5f6312ce3f88636ff2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 10V, Positive-QTOFsplash10-03di-0902700000-9d47d2145b479c0dba862021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 20V, Positive-QTOFsplash10-0zg0-9235100000-9b3f6108f53bc18890a12021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3beta-Cycloartane-3,25-diol 40V, Positive-QTOFsplash10-00pj-9364200000-0cefe1977e6acd267d6b2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019400
KNApSAcK IDNot Available
Chemspider ID491521
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound565447
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1880061
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.