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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-12 01:28:06 UTC
Update Date2022-03-07 02:56:24 UTC
HMDB IDHMDB0039925
Secondary Accession Numbers
  • HMDB39925
Metabolite Identification
Common Name2'',6''-Di-O-acetylononin
Description2'',6''-Di-O-acetylononin belongs to the class of organic compounds known as flavonoid-7-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C7-position. 2'',6''-Di-O-acetylononin has been detected, but not quantified in, pulses. This could make 2'',6''-di-O-acetylononin a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on 2'',6''-Di-O-acetylononin.
Structure
Data?1563863462
Synonyms
ValueSource
[5-(Acetyloxy)-3,4-dihydroxy-6-{[3-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl]methyl acetic acidGenerator
Chemical FormulaC26H26O11
Average Molecular Weight514.478
Monoisotopic Molecular Weight514.147511674
IUPAC Name[5-(acetyloxy)-3,4-dihydroxy-6-{[3-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl]methyl acetate
Traditional Name[5-(acetyloxy)-3,4-dihydroxy-6-{[3-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}oxan-2-yl]methyl acetate
CAS Registry NumberNot Available
SMILES
COC1=CC=C(C=C1)C1=COC2=C(C=CC(OC3OC(COC(C)=O)C(O)C(O)C3OC(C)=O)=C2)C1=O
InChI Identifier
InChI=1S/C26H26O11/c1-13(27)33-12-21-23(30)24(31)25(35-14(2)28)26(37-21)36-17-8-9-18-20(10-17)34-11-19(22(18)29)15-4-6-16(32-3)7-5-15/h4-11,21,23-26,30-31H,12H2,1-3H3
InChI KeyWAYQNCRYBDCMOP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as flavonoid-7-o-glycosides. These are phenolic compounds containing a flavonoid moiety which is O-glycosidically linked to carbohydrate moiety at the C7-position.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassFlavonoids
Sub ClassFlavonoid glycosides
Direct ParentFlavonoid-7-O-glycosides
Alternative Parents
Substituents
  • Flavonoid-7-o-glycoside
  • Flavanone
  • 3'-hydroxyflavonoid
  • 4'-hydroxyflavonoid
  • 5-hydroxyflavonoid
  • Hydroxyflavonoid
  • Flavan
  • Phenolic glycoside
  • Coumaric acid ester
  • Hydroxycinnamic acid or derivatives
  • Coumaric acid or derivatives
  • Cinnamic acid or derivatives
  • Cinnamic acid ester
  • Glycosyl compound
  • O-glycosyl compound
  • Chromone
  • 1-benzopyran
  • Benzopyran
  • Chromane
  • Aryl ketone
  • Styrene
  • Aryl alkyl ketone
  • Catechol
  • 1-hydroxy-4-unsubstituted benzenoid
  • Phenol
  • Alkyl aryl ether
  • Fatty acid ester
  • 1-hydroxy-2-unsubstituted benzenoid
  • Benzenoid
  • Monocyclic benzene moiety
  • Monosaccharide
  • Fatty acyl
  • Oxane
  • Vinylogous acid
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Ketone
  • Secondary alcohol
  • Carboxylic acid ester
  • Polyol
  • Ether
  • Carboxylic acid derivative
  • Monocarboxylic acid or derivatives
  • Acetal
  • Oxacycle
  • Organoheterocyclic compound
  • Organooxygen compound
  • Organic oxygen compound
  • Alcohol
  • Organic oxide
  • Carbonyl group
  • Hydrocarbon derivative
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.11 g/LALOGPS
logP2.11ALOGPS
logP1.49ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)12.7ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count9ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area147.05 ŲChemAxon
Rotatable Bond Count9ChemAxon
Refractivity124.63 m³·mol⁻¹ChemAxon
Polarizability51.69 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+217.15631661259
DarkChem[M-H]-214.95231661259
DeepCCS[M+H]+214.12130932474
DeepCCS[M-H]-211.72530932474
DeepCCS[M-2H]-244.60830932474
DeepCCS[M+Na]+220.09930932474
AllCCS[M+H]+219.532859911
AllCCS[M+H-H2O]+217.732859911
AllCCS[M+NH4]+221.232859911
AllCCS[M+Na]+221.732859911
AllCCS[M-H]-215.632859911
AllCCS[M+Na-2H]-216.932859911
AllCCS[M+HCOO]-218.532859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. 6.61 minutes32390414
Predicted by Siyang on May 30, 202213.2471 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20222.07 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid50.2 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid2458.6 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid224.0 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid186.1 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid190.0 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid123.4 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid443.9 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid546.9 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)165.3 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid1085.5 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid515.5 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1609.6 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid380.4 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid395.9 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate318.1 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA168.5 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water61.4 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2'',6''-Di-O-acetylononinCOC1=CC=C(C=C1)C1=COC2=C(C=CC(OC3OC(COC(C)=O)C(O)C(O)C3OC(C)=O)=C2)C1=O5447.7Standard polar33892256
2'',6''-Di-O-acetylononinCOC1=CC=C(C=C1)C1=COC2=C(C=CC(OC3OC(COC(C)=O)C(O)C(O)C3OC(C)=O)=C2)C1=O3959.7Standard non polar33892256
2'',6''-Di-O-acetylononinCOC1=CC=C(C=C1)C1=COC2=C(C=CC(OC3OC(COC(C)=O)C(O)C(O)C3OC(C)=O)=C2)C1=O4457.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
2'',6''-Di-O-acetylononin,1TMS,isomer #1COC1=CC=C(C2=COC3=CC(OC4OC(COC(C)=O)C(O[Si](C)(C)C)C(O)C4OC(C)=O)=CC=C3C2=O)C=C14141.5Semi standard non polar33892256
2'',6''-Di-O-acetylononin,1TMS,isomer #2COC1=CC=C(C2=COC3=CC(OC4OC(COC(C)=O)C(O)C(O[Si](C)(C)C)C4OC(C)=O)=CC=C3C2=O)C=C14132.4Semi standard non polar33892256
2'',6''-Di-O-acetylononin,2TMS,isomer #1COC1=CC=C(C2=COC3=CC(OC4OC(COC(C)=O)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C4OC(C)=O)=CC=C3C2=O)C=C14058.9Semi standard non polar33892256
2'',6''-Di-O-acetylononin,1TBDMS,isomer #1COC1=CC=C(C2=COC3=CC(OC4OC(COC(C)=O)C(O[Si](C)(C)C(C)(C)C)C(O)C4OC(C)=O)=CC=C3C2=O)C=C14390.9Semi standard non polar33892256
2'',6''-Di-O-acetylononin,1TBDMS,isomer #2COC1=CC=C(C2=COC3=CC(OC4OC(COC(C)=O)C(O)C(O[Si](C)(C)C(C)(C)C)C4OC(C)=O)=CC=C3C2=O)C=C14374.9Semi standard non polar33892256
2'',6''-Di-O-acetylononin,2TBDMS,isomer #1COC1=CC=C(C2=COC3=CC(OC4OC(COC(C)=O)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C4OC(C)=O)=CC=C3C2=O)C=C14523.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2'',6''-Di-O-acetylononin GC-MS (Non-derivatized) - 70eV, Positivesplash10-052f-5031900000-de87b5b6cec4aaff26272017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2'',6''-Di-O-acetylononin GC-MS (2 TMS) - 70eV, Positivesplash10-0006-5261089000-5b7d59772e7b25b9655e2017-10-06Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 10V, Positive-QTOFsplash10-014i-1090830000-baddfd9e74cce953819f2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 20V, Positive-QTOFsplash10-014i-0090100000-60432130aba5c3b8b4662016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 40V, Positive-QTOFsplash10-014i-2290000000-61cab3776ecee64344a62016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 10V, Negative-QTOFsplash10-0cdi-9051530000-6fed9da4de3028086ea02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 20V, Negative-QTOFsplash10-0aor-9060200000-af1877308650d12494532016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 40V, Negative-QTOFsplash10-0aor-9170000000-8c7e5926fd86e0f1001c2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 10V, Positive-QTOFsplash10-014i-0090120000-56f1c03196ae803863532021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 20V, Positive-QTOFsplash10-066r-1254900000-96257437d9c3532b84542021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 40V, Positive-QTOFsplash10-0006-9361500000-1ee3c67ac8caccc4aa402021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 10V, Negative-QTOFsplash10-02t9-2090150000-090ef67c45f73b7a13db2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 20V, Negative-QTOFsplash10-0aor-9080500000-bdb9679ca4a9b30ad1f12021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2'',6''-Di-O-acetylononin 40V, Negative-QTOFsplash10-0a4l-9030100000-2a60ec1026ad204e79872021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB019587
KNApSAcK IDNot Available
Chemspider ID19855761
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound21057652
PDB IDNot Available
ChEBI ID176196
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .