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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-07-09 16:11:12 UTC
Update Date2021-09-14 15:46:31 UTC
HMDB IDHMDB0060988
Secondary Accession Numbers
  • HMDB60988
Metabolite Identification
Common Name5-hydroxypropafenone
Description5-hydroxypropafenone belongs to the class of organic compounds known as cinnamylphenols. These are organic compounds containing the 1,3-diphenylpropene moiety with one benzene ring bearing one or more hydroxyl groups. 5-hydroxypropafenone is a metabolite of propafenone. 5-hydroxypropafenone is a very strong basic compound (based on its pKa).
Structure
Data?1563866131
SynonymsNot Available
Chemical FormulaC21H27NO4
Average Molecular Weight357.4434
Monoisotopic Molecular Weight357.194008357
IUPAC Name1-{5-hydroxy-2-[2-hydroxy-3-(propylamino)propoxy]phenyl}-3-phenylpropan-1-one
Traditional Name1-{5-hydroxy-2-[2-hydroxy-3-(propylamino)propoxy]phenyl}-3-phenylpropan-1-one
CAS Registry NumberNot Available
SMILES
CCCNCC(O)COC1=C(C=C(O)C=C1)C(=O)CCC1=CC=CC=C1
InChI Identifier
InChI=1S/C21H27NO4/c1-2-12-22-14-18(24)15-26-21-11-9-17(23)13-19(21)20(25)10-8-16-6-4-3-5-7-16/h3-7,9,11,13,18,22-24H,2,8,10,12,14-15H2,1H3
InChI KeyLUTWDNUXHDYZRA-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as cinnamylphenols. These are organic compounds containing the 1,3-diphenylpropene moiety with one benzene ring bearing one or more hydroxyl groups.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassLinear 1,3-diarylpropanoids
Sub ClassCinnamylphenols
Direct ParentCinnamylphenols
Alternative Parents
Substituents
  • Cinnamylphenol
  • Alkyl-phenylketone
  • Butyrophenone
  • Phenylketone
  • 4-alkoxyphenol
  • Benzoyl
  • Phenol ether
  • Phenoxy compound
  • Aryl ketone
  • Aryl alkyl ketone
  • 1-hydroxy-2-unsubstituted benzenoid
  • Alkyl aryl ether
  • Phenol
  • Monocyclic benzene moiety
  • Benzenoid
  • 1,2-aminoalcohol
  • Ketone
  • Secondary alcohol
  • Ether
  • Secondary aliphatic amine
  • Secondary amine
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organic nitrogen compound
  • Alcohol
  • Amine
  • Hydrocarbon derivative
  • Organopnictogen compound
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.015 g/LALOGPS
logP2.69ALOGPS
logP2.43ChemAxon
logS-4.4ALOGPS
pKa (Strongest Acidic)9.19ChemAxon
pKa (Strongest Basic)9.83ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area78.79 ŲChemAxon
Rotatable Bond Count11ChemAxon
Refractivity102.19 m³·mol⁻¹ChemAxon
Polarizability40.48 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+185.5931661259
DarkChem[M-H]-185.06131661259
DeepCCS[M+H]+186.67430932474
DeepCCS[M-H]-184.31630932474
DeepCCS[M-2H]-218.3830932474
DeepCCS[M+Na]+194.35730932474
AllCCS[M+H]+188.832859911
AllCCS[M+H-H2O]+185.932859911
AllCCS[M+NH4]+191.432859911
AllCCS[M+Na]+192.232859911
AllCCS[M-H]-189.232859911
AllCCS[M+Na-2H]-189.832859911
AllCCS[M+HCOO]-190.732859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
5-hydroxypropafenoneCCCNCC(O)COC1=C(C=C(O)C=C1)C(=O)CCC1=CC=CC=C13852.8Standard polar33892256
5-hydroxypropafenoneCCCNCC(O)COC1=C(C=C(O)C=C1)C(=O)CCC1=CC=CC=C12944.0Standard non polar33892256
5-hydroxypropafenoneCCCNCC(O)COC1=C(C=C(O)C=C1)C(=O)CCC1=CC=CC=C13094.3Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
5-hydroxypropafenone,1TMS,isomer #1CCCNCC(COC1=CC=C(O)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C3027.7Semi standard non polar33892256
5-hydroxypropafenone,1TMS,isomer #2CCCNCC(O)COC1=CC=C(O[Si](C)(C)C)C=C1C(=O)CCC1=CC=CC=C13052.6Semi standard non polar33892256
5-hydroxypropafenone,1TMS,isomer #3CCCN(CC(O)COC1=CC=C(O)C=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C3110.2Semi standard non polar33892256
5-hydroxypropafenone,2TMS,isomer #1CCCNCC(COC1=CC=C(O[Si](C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C2984.7Semi standard non polar33892256
5-hydroxypropafenone,2TMS,isomer #2CCCN(CC(COC1=CC=C(O)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C)[Si](C)(C)C3118.2Semi standard non polar33892256
5-hydroxypropafenone,2TMS,isomer #3CCCN(CC(O)COC1=CC=C(O[Si](C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C3086.4Semi standard non polar33892256
5-hydroxypropafenone,3TMS,isomer #1CCCN(CC(COC1=CC=C(O[Si](C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C)[Si](C)(C)C3112.7Semi standard non polar33892256
5-hydroxypropafenone,3TMS,isomer #1CCCN(CC(COC1=CC=C(O[Si](C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C)[Si](C)(C)C2954.1Standard non polar33892256
5-hydroxypropafenone,3TMS,isomer #1CCCN(CC(COC1=CC=C(O[Si](C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C)[Si](C)(C)C3429.6Standard polar33892256
5-hydroxypropafenone,1TBDMS,isomer #1CCCNCC(COC1=CC=C(O)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C3270.1Semi standard non polar33892256
5-hydroxypropafenone,1TBDMS,isomer #2CCCNCC(O)COC1=CC=C(O[Si](C)(C)C(C)(C)C)C=C1C(=O)CCC1=CC=CC=C13311.0Semi standard non polar33892256
5-hydroxypropafenone,1TBDMS,isomer #3CCCN(CC(O)COC1=CC=C(O)C=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C(C)(C)C3357.9Semi standard non polar33892256
5-hydroxypropafenone,2TBDMS,isomer #1CCCNCC(COC1=CC=C(O[Si](C)(C)C(C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C3411.4Semi standard non polar33892256
5-hydroxypropafenone,2TBDMS,isomer #2CCCN(CC(COC1=CC=C(O)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3584.4Semi standard non polar33892256
5-hydroxypropafenone,2TBDMS,isomer #3CCCN(CC(O)COC1=CC=C(O[Si](C)(C)C(C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C(C)(C)C3576.6Semi standard non polar33892256
5-hydroxypropafenone,3TBDMS,isomer #1CCCN(CC(COC1=CC=C(O[Si](C)(C)C(C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3797.0Semi standard non polar33892256
5-hydroxypropafenone,3TBDMS,isomer #1CCCN(CC(COC1=CC=C(O[Si](C)(C)C(C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3474.2Standard non polar33892256
5-hydroxypropafenone,3TBDMS,isomer #1CCCN(CC(COC1=CC=C(O[Si](C)(C)C(C)(C)C)C=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3621.6Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 5-hydroxypropafenone GC-MS (Non-derivatized) - 70eV, Positivesplash10-000f-9651000000-55d4f7328adc0917f8722017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-hydroxypropafenone GC-MS (2 TMS) - 70eV, Positivesplash10-070e-9343400000-cb9168a94fdac086348f2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 5-hydroxypropafenone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 10V, Positive-QTOFsplash10-0a4l-4249000000-4996a520c24ae40bc1d22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 20V, Positive-QTOFsplash10-0006-9331000000-84d29e178299645b2ac92017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 40V, Positive-QTOFsplash10-0006-9300000000-16557dc824a5733216032017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 10V, Negative-QTOFsplash10-0a4l-1059000000-7c8472e42675113a4c512017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 20V, Negative-QTOFsplash10-0006-1390000000-d088a72c2d48b17e17582017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 40V, Negative-QTOFsplash10-0a4i-1940000000-f2b3e1cf46dea5b1cf232017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 10V, Positive-QTOFsplash10-0a4i-0109000000-aead004f4fd7b3e15b4e2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 20V, Positive-QTOFsplash10-0596-9644000000-ec2b82e1883633ef9cfc2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 40V, Positive-QTOFsplash10-0a4l-9400000000-aa743379ab6ac41b2e982021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 10V, Negative-QTOFsplash10-052f-0197000000-c8fec55e583be6e56fab2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 20V, Negative-QTOFsplash10-000f-3890000000-5ae52863a640acca77272021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 5-hydroxypropafenone 40V, Negative-QTOFsplash10-0abi-6940000000-1b985f969d2101aa895b2021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Membrane (predicted from logP)
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound107927
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available