MetaboLIMS
Metabolomics Toolbox
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We are currently updating the database - data may be missing for the next 10 minutes. We apologize for any inconvenience.
Human Metabolome Database
Version 2.5
Search:
[Advanced]
Sequence Search
Paste query sequence(s) in
FASTA Format
below
BLAST Parameters:
Program/Sequence Type
blastp (protein sequence)
blastn (gene sequence)
Scoring Matrix
BLOSUM45
BLOSUM62
BLOSUM80
PAM30
PAM70
PAM100
Alignment View
Pairwise
Query-Anchored, Show Identities
Query-Anchored, No Identities
Flat Query-Anchored, Show Identities
Flat Query-Anchored, No Identities
Query-Anchored, No Identities & Blunt Ends
Flat Query-Anchored, No Identities & Blunt Ends
XML Blast Output
Perfom gapped alignment
Lower case filtering of FASTA sequence
Filter query sequence (DUST & SEG)
Expectation value
Cost to open a gap (-1 for blast default)
Cost to extend a gap (-1 for blast default)
Penalty for nucleotide mismatch
Reward for nucleotide match