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Showing metabocard for 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA (HMDB0006896)

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IdentificationTaxonomyOntologyPhysical propertiesSpectraBiological propertiesConcentrationsLinksReferencesenzymes (4) Show 4 proteinsXML
enzymes (4) Show 4 proteins
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2008-08-14 18:27:14 UTC
Update Date2021-09-14 15:18:11 UTC
HMDB IDHMDB0006896
Secondary Accession Numbers
  • HMDB06896
Metabolite Identification
Common Name3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA
Description3alpha,7alpha-Dihydroxy-5beta-24-oxocholestanoyl-CoA is an intermediate involved in the synthesis of Chenodeoxyglycocholoyl-CoA, which is is a coenzyme A derivative of chenodeoxyglycocholate. It is involved in bile acid synthesis and is the second-to-last component in the synthesis of chenodeoxyglycocholate. 3a,7a-dihydroxy-5b-24-oxocholestanoyl-CoA is synthesized from 3a,7a,24-trihydroxy-5b-cholestanoyl-CoA and then transformed via acetyl-CoA acyltransferase to chenodeoxyglycocholoyl-CoA and then finally to chenodeoxyglycocholate. Chenodeoxyglycocholate is a glycine conjugated bile acid. Bile acids are steroid acids found predominantly in the bile of mammals. The distinction between different bile acids is minute, depending only on the presence or absence of hydroxyl groups on positions 3, 7, and 12. Bile acids are physiological detergents that facilitate excretion, absorption, and transport of fats and sterols in the intestine and liver. Bile acids are also steroidal amphipathic molecules derived from the catabolism of cholesterol. They modulate bile flow and lipid secretion, are essential for the absorption of dietary fats and vitamins, and have been implicated in the regulation of all the key enzymes involved in cholesterol homeostasis. Bile acids recirculate through the liver, bile ducts, small intestine and portal vein to form an enterohepatic circuit. They exist as anions at physiological pH and, consequently, require a carrier for transport across the membranes of the enterohepatic tissues. The unique detergent properties of bile acids are essential for the digestion and intestinal absorption of hydrophobic nutrients. Bile acids have potent toxic properties (e.g. membrane disruption) and there are a plethora of mechanisms to limit their accumulation in blood and tissues (PMID: 11316487 , 16037564 , 12576301 , 11907135 ).
Structure
Data?1582752414
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)


  Mrv0541 02231220552D          

 80 86  0  0  0  0            999 V2000
    6.8356   -2.8980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    6.1316   -1.6772    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

3D MOL for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)

HMDB0006896
     RDKit          3D
3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA
157163  0  0  0  0  0  0  0  0999 V2000
   -4.1964    0.1584    0.8096 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6073    0.6207   -0.4846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6056    1.2873   -1.3858 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8124    0.7557   -2.4755 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3086    2.4903   -1.0487 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6227    2.4812   -0.4201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7900    1.8031   -1.1023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4902    0.3644   -1.2485 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0227    2.1362   -0.3143 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0037    1.6525    1.1119 C   0  0  0  0  0  0  0  0  0  0  0  0
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   11.6392   -0.5953   -0.9426 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.7761   -1.1673   -1.5037 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2960   -2.2392   -0.5749 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.4284   -2.7539   -1.2165 O   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
Download

3D SDF for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)


  Mrv0541 02231220552D          

 80 86  0  0  0  0            999 V2000
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   -3.7670    3.3875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3270    2.1062    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.6084    1.5013    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0741    2.8926    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   -2.8376    1.4353    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4937    1.5123    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7276    4.3389    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4277    2.3097    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3077    1.4903    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4993    0.6709    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1849    4.3389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7276    5.1803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1849    5.1803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9218    3.9099    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4591    5.6092    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9218    5.5982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6422    4.3389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6422    5.1803    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9218    6.4342    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.9308   -4.9328    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END
> <DATABASE_ID>
HMDB0006896

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@@]12C[C@H](O)CC[C@]1(C)C1CC[C@]3(C)C(CCC3C1[C@H](O)C2)C(C)CCC(=O)C(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N

> <INCHI_IDENTIFIER>
InChI=1S/C48H78N7O20P3S/c1-25(29-8-9-30-36-31(12-15-48(29,30)6)47(5)14-11-28(56)19-27(47)20-33(36)58)7-10-32(57)26(2)45(63)79-18-17-50-35(59)13-16-51-43(62)40(61)46(3,4)22-72-78(69,70)75-77(67,68)71-21-34-39(74-76(64,65)66)38(60)44(73-34)55-24-54-37-41(49)52-23-53-42(37)55/h23-31,33-34,36,38-40,44,56,58,60-61H,7-22H2,1-6H3,(H,50,59)(H,51,62)(H,67,68)(H,69,70)(H2,49,52,53)(H2,64,65,66)/t25?,26?,27-,28+,29?,30?,31?,33+,34+,36?,38+,39+,40?,44+,47-,48+/m0/s1

> <INCHI_KEY>
QWTJBRPOHKIMDT-XWFLEUKDSA-N

> <FORMULA>
C48H78N7O20P3S

> <MOLECULAR_WEIGHT>
1198.154

> <EXACT_MASS>
1197.423518197

> <JCHEM_ACCEPTOR_COUNT>
20

> <JCHEM_AVERAGE_POLARIZABILITY>
118.53834845187708

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
11

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-2-[({[({3-[(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxy}phosphonic acid

> <ALOGPS_LOGP>
1.48

> <JCHEM_LOGP>
-2.273719385737506

> <ALOGPS_LOGS>
-3.17

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
7

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-4

> <JCHEM_PKA>
1.8334045171466729

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.8252479626233913

> <JCHEM_PKA_STRONGEST_BASIC>
4.946045739396937

> <JCHEM_POLAR_SURFACE_AREA>
421.1599999999999

> <JCHEM_REFRACTIVITY>
283.30780000000016

> <JCHEM_ROTATABLE_BOND_COUNT>
26

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
8.04e-01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-2-{[({3-[(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy(hydroxy)phosphoryl}oxy(hydroxy)phosphoryl)oxy]methyl}-4-hydroxyoxolan-3-yl]oxyphosphonic acid

> <JCHEM_VEBER_RULE>
0

$$$$
Download

3D-SDF for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)

HMDB0006896
     RDKit          3D
3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA
157163  0  0  0  0  0  0  0  0999 V2000
   -4.1964    0.1584    0.8096 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6073    0.6207   -0.4846 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6056    1.2873   -1.3858 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8124    0.7557   -2.4755 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3086    2.4903   -1.0487 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6227    2.4812   -0.4201 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.7900    1.8031   -1.1023 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.4902    0.3644   -1.2485 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0227    2.1362   -0.3143 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.0037    1.6525    1.1119 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2552    0.7494    1.1358 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1596    1.5155    0.3140 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4746    0.9536   -0.1114 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4352   -0.2398   -0.9971 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.1637   -0.3236   -1.8093 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5025    1.0004   -2.0489 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3529    1.8992   -0.9108 C   0  0  2  0  0  0  0  0  0  0  0  0
  -10.9929    3.2684   -1.3176 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.8402   -1.5535   -0.4135 C   0  0  1  0  0  0  0  0  0  0  0  0
  -13.1652   -2.4945   -1.5880 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.9254   -2.2158    0.5259 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.4150   -3.5765    0.8749 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8749   -3.7938    0.8270 C   0  0  1  0  0  0  0  0  0  0  0  0
  -14.2205   -4.6026    1.9424 O   0  0  0  0  0  0  0  0  0  0  0  0
  -14.7410   -2.5997    0.8548 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1620   -1.3436    0.2971 C   0  0  1  0  0  0  0  0  0  0  0  0
  -14.0553   -0.3422    1.3953 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.3896    0.9388    1.0358 C   0  0  1  0  0  0  0  0  0  0  0  0
  -12.7278    1.3824    2.2081 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0039   -0.5268   -1.2011 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1516   -0.5222   -2.4702 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1207   -1.8873   -0.5950 S   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6387   -2.0415    1.0657 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4852   -1.2661    1.5880 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4863    0.1450    1.5044 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6170    0.8779    2.0775 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5390    0.2503    2.6426 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6238    2.3410    1.9808 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7033    2.9058    2.8821 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0124    2.4350    2.5839 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.6351    2.6404    1.3455 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0082    3.2709    0.4618 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0073    2.0939    1.1592 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4441    1.4114    2.2662 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.1305    1.3294   -0.1359 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8692    2.2407   -1.2971 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1178    0.1772   -0.1588 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5164    0.7280   -0.1562 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4911    1.7148   -0.0922 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.0050    0.9602   -0.0510 P   0  0  0  0  0  5  0  0  0  0  0  0
    8.8260   -0.5014   -0.2882 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.6433    1.1459    1.5298 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0424    1.6858   -1.1457 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.0126    0.5936   -1.9778 P   0  0  0  0  0  5  0  0  0  0  0  0
   12.1786    1.2938   -2.6255 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1074   -0.1576   -3.1951 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6392   -0.5953   -0.9426 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.7761   -1.1673   -1.5037 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2960   -2.2392   -0.5749 C   0  0  1  0  0  0  0  0  0  0  0  0
   14.4284   -2.7539   -1.2165 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.5464   -2.5387   -0.4624 C   0  0  1  0  0  0  0  0  0  0  0  0
   16.6483   -2.1604   -1.3331 N   0  0  0  0  0  0  0  0  0  0  0  0
   16.9307   -2.7060   -2.5152 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.0306   -2.1023   -3.0492 N   0  0  0  0  0  0  0  0  0  0  0  0
   18.4551   -1.1597   -2.1959 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.4986   -0.2595   -2.2155 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.3825   -0.2256   -3.3168 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.6319    0.5633   -1.1637 N   0  0  0  0  0  0  0  0  0  0  0  0
   18.7565    0.4974   -0.1203 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7360   -0.3764   -0.0912 N   0  0  0  0  0  0  0  0  0  0  0  0
   17.5673   -1.2126   -1.1167 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.1922   -1.4340    0.4781 C   0  0  2  0  0  0  0  0  0  0  0  0
   15.9614   -1.3809    1.6205 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.7372   -1.7481    0.7539 C   0  0  2  0  0  0  0  0  0  0  0  0
   13.5505   -2.5981    1.8032 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.6886   -2.1025    3.0907 P   0  0  0  0  0  5  0  0  0  0  0  0
   11.6865   -3.0998    3.6252 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.7932   -0.7376    2.6242 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.6183   -1.6028    4.4278 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4216    0.1960    1.6157 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6825   -0.8204    0.7073 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0090    0.8672    1.1017 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8299    1.4215   -0.3298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6274    3.1400   -0.3848 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3522    3.1978   -1.9760 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6338    2.2802    0.6766 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9485    3.6180   -0.4407 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9028    2.3401   -2.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3088   -0.3140   -0.8979 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5935    0.0094   -0.6795 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3336    0.0911   -2.3054 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.9452    3.2780   -0.1863 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.1760    2.4378    1.8680 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1120    1.0934    1.4035 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8927   -0.2203    0.8174 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5068    0.6721    2.2213 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3939    2.4735    0.8511 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.8351    1.8070   -0.7892 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2372   -0.0948   -1.8000 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5096   -1.0734   -1.3380 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3522   -0.7349   -2.8399 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5457    0.7982   -2.5475 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0838    1.5470   -2.8671 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.7842    3.0661   -2.0475 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3679    3.7975   -0.4298 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1680    3.8251   -1.7942 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.8843   -2.0317   -2.5626 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.5450   -3.4196   -1.5230 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2487   -2.7005   -1.6775 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8663   -1.6238    1.4797 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8683   -2.3212    0.2077 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.9916   -3.8295    1.8939 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8974   -4.3132    0.1922 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1369   -4.4566   -0.0493 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.7881   -5.5034    1.8615 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1579   -2.4354    1.8939 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.6695   -2.8311    0.2520 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.8345   -0.8739   -0.4830 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.5681   -0.8577    2.2660 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1149   -0.1861    1.7671 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2260    1.7020    0.9447 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7918    2.3446    2.3364 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3409   -3.1559    1.2252 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5265   -1.9001    1.7604 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3925   -1.5238    2.6982 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4781   -1.6864    1.1530 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2145    0.6853    1.0636 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3668    2.7463    2.2993 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7805    2.6695    0.9233 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4139    2.6332    3.9313 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6519    4.0261    2.8822 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5275    1.9029    3.3491 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6682    2.9997    1.0392 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0330    0.5165    2.3505 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9328    1.9468   -1.8092 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.6960    2.1330   -2.0378 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8285    3.3072   -0.9680 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3893    0.3577   -0.9996 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6431   -0.7534   -0.3881 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.5692    0.1355    0.7901 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6281    0.1027   -1.0759 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6859    0.0428    0.6904 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.4671    2.0531    1.8366 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.2121   -1.1264   -3.2008 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.5492   -0.4124   -1.7488 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.4553   -1.5903   -2.4797 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.4890   -3.0017   -0.5276 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.7715   -3.4981    0.0570 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.4251   -3.4947   -3.0297 H   0  0  0  0  0  0  0  0  0  0  0  0
   21.3988   -0.1102   -3.1631 H   0  0  0  0  0  0  0  0  0  0  0  0
   20.0311   -0.3157   -4.2871 H   0  0  0  0  0  0  0  0  0  0  0  0
   18.8992    1.1891    0.7242 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.3081   -0.4701   -0.0580 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.6163   -0.6393    2.1692 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.2352   -0.7966    0.9819 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.9142   -0.7176    3.0747 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.4034   -2.1865    4.5757 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
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 79157  1  0
M  END
Download

PDB for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)

HEADER    PROTEIN                                 23-FEB-12   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-FEB-12         0                                  
HETATM    1  C   UNK     0      12.760  -5.410   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      14.074  -6.169   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      12.770  -3.880   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      10.101  -5.420   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      15.398  -5.430   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      14.063  -7.689   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      11.446  -3.131   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      14.094  -3.131   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      12.739  -2.310   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      10.111  -3.880   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      16.701  -6.200   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      15.408  -3.901   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      15.367  -8.459   0.000  0.00  0.00           C+0
HETATM   14  O   UNK     0      12.739  -8.428   0.000  0.00  0.00           O+0
HETATM   15  C   UNK     0      11.456  -1.591   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      16.681  -7.709   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      18.036  -5.461   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      16.691  -4.660   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      10.122  -0.831   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      12.780  -0.821   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      17.985  -8.489   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      19.330  -6.241   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       8.787  -1.601   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      19.309  -7.750   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       7.442  -0.831   0.000  0.00  0.00           C+0
HETATM   26  O   UNK     0      20.612  -8.530   0.000  0.00  0.00           O+0
HETATM   27  C   UNK     0       6.118  -1.601   0.000  0.00  0.00           C+0
HETATM   28  O   UNK     0       7.442   0.708   0.000  0.00  0.00           O+0
HETATM   29  C   UNK     0       4.773  -0.831   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0       6.118  -3.151   0.000  0.00  0.00           C+0
HETATM   31  S   UNK     0       3.449  -1.601   0.000  0.00  0.00           S+0
HETATM   32  O   UNK     0       4.763   0.719   0.000  0.00  0.00           O+0
HETATM   33  C   UNK     0       2.094  -0.821   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       0.749  -1.601   0.000  0.00  0.00           C+0
HETATM   35  N   UNK     0      -0.606  -0.821   0.000  0.00  0.00           N+0
HETATM   36  C   UNK     0      -1.950  -1.601   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      -3.295  -0.821   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      -1.950  -3.172   0.000  0.00  0.00           O+0
HETATM   39  C   UNK     0      -4.650  -1.601   0.000  0.00  0.00           C+0
HETATM   40  N   UNK     0      -5.995  -0.821   0.000  0.00  0.00           N+0
HETATM   41  C   UNK     0      -7.350  -1.601   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      -8.695  -0.821   0.000  0.00  0.00           C+0
HETATM   43  O   UNK     0      -7.350  -3.172   0.000  0.00  0.00           O+0
HETATM   44  C   UNK     0     -10.050  -1.601   0.000  0.00  0.00           C+0
HETATM   45  O   UNK     0      -8.695   0.729   0.000  0.00  0.00           O+0
HETATM   46  C   UNK     0     -11.405  -0.821   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0     -10.070  -2.997   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0     -10.081   0.000   0.000  0.00  0.00           C+0
HETATM   49  O   UNK     0     -12.739  -1.601   0.000  0.00  0.00           O+0
HETATM   50  P   UNK     0     -14.361  -1.632   0.000  0.00  0.00           P+0
HETATM   51  O   UNK     0     -14.371   1.540   0.000  0.00  0.00           O+0
HETATM   52  O   UNK     0     -14.382  -3.480   0.000  0.00  0.00           O+0
HETATM   53  O   UNK     0     -15.932  -1.612   0.000  0.00  0.00           O+0
HETATM   54  P   UNK     0     -14.371   4.835   0.000  0.00  0.00           P+0
HETATM   55  O   UNK     0     -11.887   4.866   0.000  0.00  0.00           O+0
HETATM   56  O   UNK     0     -14.361   6.416   0.000  0.00  0.00           O+0
HETATM   57  O   UNK     0     -15.932   4.866   0.000  0.00  0.00           O+0
HETATM   58  C   UNK     0      -9.752   5.872   0.000  0.00  0.00           C+0
HETATM   59  C   UNK     0      -8.305   5.420   0.000  0.00  0.00           C+0
HETATM   60  C   UNK     0      -7.802   3.932   0.000  0.00  0.00           C+0
HETATM   61  O   UNK     0      -7.032   6.323   0.000  0.00  0.00           O+0
HETATM   62  C   UNK     0      -6.210   3.932   0.000  0.00  0.00           C+0
HETATM   63  O   UNK     0      -8.602   2.802   0.000  0.00  0.00           O+0
HETATM   64  C   UNK     0      -5.738   5.400   0.000  0.00  0.00           C+0
HETATM   65  O   UNK     0      -5.297   2.679   0.000  0.00  0.00           O+0
HETATM   66  P   UNK     0     -10.255   2.823   0.000  0.00  0.00           P+0
HETATM   67  N   UNK     0      -5.092   8.099   0.000  0.00  0.00           N+0
HETATM   68  O   UNK     0     -10.132   4.311   0.000  0.00  0.00           O+0
HETATM   69  O   UNK     0     -11.774   2.782   0.000  0.00  0.00           O+0
HETATM   70  O   UNK     0     -10.265   1.252   0.000  0.00  0.00           O+0
HETATM   71  C   UNK     0      -7.812   8.099   0.000  0.00  0.00           C+0
HETATM   72  C   UNK     0      -5.092   9.670   0.000  0.00  0.00           C+0
HETATM   73  C   UNK     0      -7.812   9.670   0.000  0.00  0.00           C+0
HETATM   74  N   UNK     0      -9.187   7.298   0.000  0.00  0.00           N+0
HETATM   75  N   UNK     0      -6.457  10.471   0.000  0.00  0.00           N+0
HETATM   76  C   UNK     0      -9.187  10.450   0.000  0.00  0.00           C+0
HETATM   77  C   UNK     0     -10.532   8.099   0.000  0.00  0.00           C+0
HETATM   78  N   UNK     0     -10.532   9.670   0.000  0.00  0.00           N+0
HETATM   79  N   UNK     0      -9.187  12.011   0.000  0.00  0.00           N+0
HETATM   80  H   UNK     0      16.671  -9.208   0.000  0.00  0.00           H+0
CONECT    1    2    3    4                                                  
CONECT    2    1    5    6                                                  
CONECT    3    1    7    8    9                                             
CONECT    4    1   10                                                       
CONECT    5    2   11   12                                                  
CONECT    6    2   13   14                                                  
CONECT    7    3   15   10                                                  
CONECT    8    3   12                                                       
CONECT    9    3                                                            
CONECT   10    4    7                                                       
CONECT   11    5   16   17   18                                             
CONECT   12    5    8                                                       
CONECT   13    6   16                                                       
CONECT   14    6                                                            
CONECT   15    7   19   20                                                  
CONECT   16   11   21   13   80                                             
CONECT   17   11   22                                                       
CONECT   18   11                                                            
CONECT   19   15   23                                                       
CONECT   20   15                                                            
CONECT   21   16   24                                                       
CONECT   22   17   24                                                       
CONECT   23   19   25                                                       
CONECT   24   21   26   22                                                  
CONECT   25   23   27   28                                                  
CONECT   26   24                                                            
CONECT   27   25   29   30                                                  
CONECT   28   25                                                            
CONECT   29   27   31   32                                                  
CONECT   30   27                                                            
CONECT   31   29   33                                                       
CONECT   32   29                                                            
CONECT   33   31   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35   37   38                                                  
CONECT   37   36   39                                                       
CONECT   38   36                                                            
CONECT   39   37   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42   43                                                  
CONECT   42   41   44   45                                                  
CONECT   43   41                                                            
CONECT   44   42   46   47   48                                             
CONECT   45   42                                                            
CONECT   46   44   49                                                       
CONECT   47   44                                                            
CONECT   48   44                                                            
CONECT   49   46   50                                                       
CONECT   50   49   51   52   53                                             
CONECT   51   50   54                                                       
CONECT   52   50                                                            
CONECT   53   50                                                            
CONECT   54   51   55   56   57                                             
CONECT   55   54   58                                                       
CONECT   56   54                                                            
CONECT   57   54                                                            
CONECT   58   55   59                                                       
CONECT   59   58   60   61                                                  
CONECT   60   59   62   63                                                  
CONECT   61   59   64                                                       
CONECT   62   60   65   64                                                  
CONECT   63   60   66                                                       
CONECT   64   61   67   62                                                  
CONECT   65   62                                                            
CONECT   66   63   68   69   70                                             
CONECT   67   64   71   72                                                  
CONECT   68   66                                                            
CONECT   69   66                                                            
CONECT   70   66                                                            
CONECT   71   67   73   74                                                  
CONECT   72   67   75                                                       
CONECT   73   71   76   75                                                  
CONECT   74   71   77                                                       
CONECT   75   72   73                                                       
CONECT   76   73   78   79                                                  
CONECT   77   74   78                                                       
CONECT   78   76   77                                                       
CONECT   79   76                                                            
CONECT   80   16                                                            
MASTER        0    0    0    0    0    0    0    0   80    0  172    0
END
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3D PDB for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)

COMPND    HMDB0006896
HETATM    1  C1  UNL     1      -4.196   0.158   0.810  1.00  0.00           C  
HETATM    2  C2  UNL     1      -3.607   0.621  -0.485  1.00  0.00           C  
HETATM    3  C3  UNL     1      -4.606   1.287  -1.386  1.00  0.00           C  
HETATM    4  O1  UNL     1      -4.812   0.756  -2.476  1.00  0.00           O  
HETATM    5  C4  UNL     1      -5.309   2.490  -1.049  1.00  0.00           C  
HETATM    6  C5  UNL     1      -6.623   2.481  -0.420  1.00  0.00           C  
HETATM    7  C6  UNL     1      -7.790   1.803  -1.102  1.00  0.00           C  
HETATM    8  C7  UNL     1      -7.490   0.364  -1.248  1.00  0.00           C  
HETATM    9  C8  UNL     1      -9.023   2.136  -0.314  1.00  0.00           C  
HETATM   10  C9  UNL     1      -9.004   1.653   1.112  1.00  0.00           C  
HETATM   11  C10 UNL     1     -10.255   0.749   1.136  1.00  0.00           C  
HETATM   12  C11 UNL     1     -11.160   1.516   0.314  1.00  0.00           C  
HETATM   13  C12 UNL     1     -12.475   0.954  -0.111  1.00  0.00           C  
HETATM   14  C13 UNL     1     -12.435  -0.240  -0.997  1.00  0.00           C  
HETATM   15  C14 UNL     1     -11.164  -0.324  -1.809  1.00  0.00           C  
HETATM   16  C15 UNL     1     -10.502   1.000  -2.049  1.00  0.00           C  
HETATM   17  C16 UNL     1     -10.353   1.899  -0.911  1.00  0.00           C  
HETATM   18  C17 UNL     1     -10.993   3.268  -1.318  1.00  0.00           C  
HETATM   19  C18 UNL     1     -12.840  -1.554  -0.413  1.00  0.00           C  
HETATM   20  C19 UNL     1     -13.165  -2.494  -1.588  1.00  0.00           C  
HETATM   21  C20 UNL     1     -11.925  -2.216   0.526  1.00  0.00           C  
HETATM   22  C21 UNL     1     -12.415  -3.576   0.875  1.00  0.00           C  
HETATM   23  C22 UNL     1     -13.875  -3.794   0.827  1.00  0.00           C  
HETATM   24  O2  UNL     1     -14.221  -4.603   1.942  1.00  0.00           O  
HETATM   25  C23 UNL     1     -14.741  -2.600   0.855  1.00  0.00           C  
HETATM   26  C24 UNL     1     -14.162  -1.344   0.297  1.00  0.00           C  
HETATM   27  C25 UNL     1     -14.055  -0.342   1.395  1.00  0.00           C  
HETATM   28  C26 UNL     1     -13.390   0.939   1.036  1.00  0.00           C  
HETATM   29  O3  UNL     1     -12.728   1.382   2.208  1.00  0.00           O  
HETATM   30  C27 UNL     1      -3.004  -0.527  -1.201  1.00  0.00           C  
HETATM   31  O4  UNL     1      -3.152  -0.522  -2.470  1.00  0.00           O  
HETATM   32  S1  UNL     1      -2.121  -1.887  -0.595  1.00  0.00           S  
HETATM   33  C28 UNL     1      -1.639  -2.042   1.066  1.00  0.00           C  
HETATM   34  C29 UNL     1      -0.485  -1.266   1.588  1.00  0.00           C  
HETATM   35  N1  UNL     1      -0.486   0.145   1.504  1.00  0.00           N  
HETATM   36  C30 UNL     1       0.617   0.878   2.078  1.00  0.00           C  
HETATM   37  O5  UNL     1       1.539   0.250   2.643  1.00  0.00           O  
HETATM   38  C31 UNL     1       0.624   2.341   1.981  1.00  0.00           C  
HETATM   39  C32 UNL     1       1.703   2.906   2.882  1.00  0.00           C  
HETATM   40  N2  UNL     1       3.012   2.435   2.584  1.00  0.00           N  
HETATM   41  C33 UNL     1       3.635   2.640   1.346  1.00  0.00           C  
HETATM   42  O6  UNL     1       3.008   3.271   0.462  1.00  0.00           O  
HETATM   43  C34 UNL     1       5.007   2.094   1.159  1.00  0.00           C  
HETATM   44  O7  UNL     1       5.444   1.411   2.266  1.00  0.00           O  
HETATM   45  C35 UNL     1       5.131   1.329  -0.136  1.00  0.00           C  
HETATM   46  C36 UNL     1       4.869   2.241  -1.297  1.00  0.00           C  
HETATM   47  C37 UNL     1       4.118   0.177  -0.159  1.00  0.00           C  
HETATM   48  C38 UNL     1       6.516   0.728  -0.156  1.00  0.00           C  
HETATM   49  O8  UNL     1       7.491   1.715  -0.092  1.00  0.00           O  
HETATM   50  P1  UNL     1       9.005   0.960  -0.051  1.00  0.00           P  
HETATM   51  O9  UNL     1       8.826  -0.501  -0.288  1.00  0.00           O  
HETATM   52  O10 UNL     1       9.643   1.146   1.530  1.00  0.00           O  
HETATM   53  O11 UNL     1      10.042   1.686  -1.146  1.00  0.00           O  
HETATM   54  P2  UNL     1      11.013   0.594  -1.978  1.00  0.00           P  
HETATM   55  O12 UNL     1      12.179   1.294  -2.626  1.00  0.00           O  
HETATM   56  O13 UNL     1      10.107  -0.158  -3.195  1.00  0.00           O  
HETATM   57  O14 UNL     1      11.639  -0.595  -0.943  1.00  0.00           O  
HETATM   58  C39 UNL     1      12.776  -1.167  -1.504  1.00  0.00           C  
HETATM   59  C40 UNL     1      13.296  -2.239  -0.575  1.00  0.00           C  
HETATM   60  O15 UNL     1      14.428  -2.754  -1.216  1.00  0.00           O  
HETATM   61  C41 UNL     1      15.546  -2.539  -0.462  1.00  0.00           C  
HETATM   62  N3  UNL     1      16.648  -2.160  -1.333  1.00  0.00           N  
HETATM   63  C42 UNL     1      16.931  -2.706  -2.515  1.00  0.00           C  
HETATM   64  N4  UNL     1      18.031  -2.102  -3.049  1.00  0.00           N  
HETATM   65  C43 UNL     1      18.455  -1.160  -2.196  1.00  0.00           C  
HETATM   66  C44 UNL     1      19.499  -0.259  -2.215  1.00  0.00           C  
HETATM   67  N5  UNL     1      20.383  -0.226  -3.317  1.00  0.00           N  
HETATM   68  N6  UNL     1      19.632   0.563  -1.164  1.00  0.00           N  
HETATM   69  C45 UNL     1      18.757   0.497  -0.120  1.00  0.00           C  
HETATM   70  N7  UNL     1      17.736  -0.376  -0.091  1.00  0.00           N  
HETATM   71  C46 UNL     1      17.567  -1.213  -1.117  1.00  0.00           C  
HETATM   72  C47 UNL     1      15.192  -1.434   0.478  1.00  0.00           C  
HETATM   73  O16 UNL     1      15.961  -1.381   1.621  1.00  0.00           O  
HETATM   74  C48 UNL     1      13.737  -1.748   0.754  1.00  0.00           C  
HETATM   75  O17 UNL     1      13.551  -2.598   1.803  1.00  0.00           O  
HETATM   76  P3  UNL     1      12.689  -2.103   3.091  1.00  0.00           P  
HETATM   77  O18 UNL     1      11.686  -3.100   3.625  1.00  0.00           O  
HETATM   78  O19 UNL     1      11.793  -0.738   2.624  1.00  0.00           O  
HETATM   79  O20 UNL     1      13.618  -1.603   4.428  1.00  0.00           O  
HETATM   80  H1  UNL     1      -3.422   0.196   1.616  1.00  0.00           H  
HETATM   81  H2  UNL     1      -4.682  -0.820   0.707  1.00  0.00           H  
HETATM   82  H3  UNL     1      -5.009   0.867   1.102  1.00  0.00           H  
HETATM   83  H4  UNL     1      -2.830   1.421  -0.330  1.00  0.00           H  
HETATM   84  H5  UNL     1      -4.627   3.140  -0.385  1.00  0.00           H  
HETATM   85  H6  UNL     1      -5.352   3.198  -1.976  1.00  0.00           H  
HETATM   86  H7  UNL     1      -6.634   2.280   0.677  1.00  0.00           H  
HETATM   87  H8  UNL     1      -6.949   3.618  -0.441  1.00  0.00           H  
HETATM   88  H9  UNL     1      -7.903   2.340  -2.088  1.00  0.00           H  
HETATM   89  H10 UNL     1      -8.309  -0.314  -0.898  1.00  0.00           H  
HETATM   90  H11 UNL     1      -6.593   0.009  -0.680  1.00  0.00           H  
HETATM   91  H12 UNL     1      -7.334   0.091  -2.305  1.00  0.00           H  
HETATM   92  H13 UNL     1      -8.945   3.278  -0.186  1.00  0.00           H  
HETATM   93  H14 UNL     1      -9.176   2.438   1.868  1.00  0.00           H  
HETATM   94  H15 UNL     1      -8.112   1.093   1.404  1.00  0.00           H  
HETATM   95  H16 UNL     1      -9.893  -0.220   0.817  1.00  0.00           H  
HETATM   96  H17 UNL     1     -10.507   0.672   2.221  1.00  0.00           H  
HETATM   97  H18 UNL     1     -11.394   2.473   0.851  1.00  0.00           H  
HETATM   98  H19 UNL     1     -12.835   1.807  -0.789  1.00  0.00           H  
HETATM   99  H20 UNL     1     -13.237  -0.095  -1.800  1.00  0.00           H  
HETATM  100  H21 UNL     1     -10.510  -1.073  -1.338  1.00  0.00           H  
HETATM  101  H22 UNL     1     -11.352  -0.735  -2.840  1.00  0.00           H  
HETATM  102  H23 UNL     1      -9.546   0.798  -2.547  1.00  0.00           H  
HETATM  103  H24 UNL     1     -11.084   1.547  -2.867  1.00  0.00           H  
HETATM  104  H25 UNL     1     -11.784   3.066  -2.047  1.00  0.00           H  
HETATM  105  H26 UNL     1     -11.368   3.798  -0.430  1.00  0.00           H  
HETATM  106  H27 UNL     1     -10.168   3.825  -1.794  1.00  0.00           H  
HETATM  107  H28 UNL     1     -12.884  -2.032  -2.563  1.00  0.00           H  
HETATM  108  H29 UNL     1     -12.545  -3.420  -1.523  1.00  0.00           H  
HETATM  109  H30 UNL     1     -14.249  -2.701  -1.678  1.00  0.00           H  
HETATM  110  H31 UNL     1     -11.866  -1.624   1.480  1.00  0.00           H  
HETATM  111  H32 UNL     1     -10.868  -2.321   0.208  1.00  0.00           H  
HETATM  112  H33 UNL     1     -11.992  -3.829   1.894  1.00  0.00           H  
HETATM  113  H34 UNL     1     -11.897  -4.313   0.192  1.00  0.00           H  
HETATM  114  H35 UNL     1     -14.137  -4.457  -0.049  1.00  0.00           H  
HETATM  115  H36 UNL     1     -13.788  -5.503   1.861  1.00  0.00           H  
HETATM  116  H37 UNL     1     -15.158  -2.435   1.894  1.00  0.00           H  
HETATM  117  H38 UNL     1     -15.669  -2.831   0.252  1.00  0.00           H  
HETATM  118  H39 UNL     1     -14.835  -0.874  -0.483  1.00  0.00           H  
HETATM  119  H40 UNL     1     -13.568  -0.858   2.266  1.00  0.00           H  
HETATM  120  H41 UNL     1     -15.115  -0.186   1.767  1.00  0.00           H  
HETATM  121  H42 UNL     1     -14.226   1.702   0.945  1.00  0.00           H  
HETATM  122  H43 UNL     1     -12.792   2.345   2.336  1.00  0.00           H  
HETATM  123  H44 UNL     1      -1.341  -3.156   1.225  1.00  0.00           H  
HETATM  124  H45 UNL     1      -2.527  -1.900   1.760  1.00  0.00           H  
HETATM  125  H46 UNL     1      -0.392  -1.524   2.698  1.00  0.00           H  
HETATM  126  H47 UNL     1       0.478  -1.686   1.153  1.00  0.00           H  
HETATM  127  H48 UNL     1      -1.215   0.685   1.064  1.00  0.00           H  
HETATM  128  H49 UNL     1      -0.367   2.746   2.299  1.00  0.00           H  
HETATM  129  H50 UNL     1       0.781   2.670   0.923  1.00  0.00           H  
HETATM  130  H51 UNL     1       1.414   2.633   3.931  1.00  0.00           H  
HETATM  131  H52 UNL     1       1.652   4.026   2.882  1.00  0.00           H  
HETATM  132  H53 UNL     1       3.528   1.903   3.349  1.00  0.00           H  
HETATM  133  H54 UNL     1       5.668   3.000   1.039  1.00  0.00           H  
HETATM  134  H55 UNL     1       5.033   0.516   2.351  1.00  0.00           H  
HETATM  135  H56 UNL     1       3.933   1.947  -1.809  1.00  0.00           H  
HETATM  136  H57 UNL     1       5.696   2.133  -2.038  1.00  0.00           H  
HETATM  137  H58 UNL     1       4.828   3.307  -0.968  1.00  0.00           H  
HETATM  138  H59 UNL     1       3.389   0.358  -1.000  1.00  0.00           H  
HETATM  139  H60 UNL     1       4.643  -0.753  -0.388  1.00  0.00           H  
HETATM  140  H61 UNL     1       3.569   0.136   0.790  1.00  0.00           H  
HETATM  141  H62 UNL     1       6.628   0.103  -1.076  1.00  0.00           H  
HETATM  142  H63 UNL     1       6.686   0.043   0.690  1.00  0.00           H  
HETATM  143  H64 UNL     1       9.467   2.053   1.837  1.00  0.00           H  
HETATM  144  H65 UNL     1      10.212  -1.126  -3.201  1.00  0.00           H  
HETATM  145  H66 UNL     1      13.549  -0.412  -1.749  1.00  0.00           H  
HETATM  146  H67 UNL     1      12.455  -1.590  -2.480  1.00  0.00           H  
HETATM  147  H68 UNL     1      12.489  -3.002  -0.528  1.00  0.00           H  
HETATM  148  H69 UNL     1      15.772  -3.498   0.057  1.00  0.00           H  
HETATM  149  H70 UNL     1      16.425  -3.495  -3.030  1.00  0.00           H  
HETATM  150  H71 UNL     1      21.399  -0.110  -3.163  1.00  0.00           H  
HETATM  151  H72 UNL     1      20.031  -0.316  -4.287  1.00  0.00           H  
HETATM  152  H73 UNL     1      18.899   1.189   0.724  1.00  0.00           H  
HETATM  153  H74 UNL     1      15.308  -0.470  -0.058  1.00  0.00           H  
HETATM  154  H75 UNL     1      15.616  -0.639   2.169  1.00  0.00           H  
HETATM  155  H76 UNL     1      13.235  -0.797   0.982  1.00  0.00           H  
HETATM  156  H77 UNL     1      10.914  -0.718   3.075  1.00  0.00           H  
HETATM  157  H78 UNL     1      14.403  -2.187   4.576  1.00  0.00           H  
CONECT    1    2   80   81   82
CONECT    2    3   30   83
CONECT    3    4    4    5
CONECT    5    6   84   85
CONECT    6    7   86   87
CONECT    7    8    9   88
CONECT    8   89   90   91
CONECT    9   10   17   92
CONECT   10   11   93   94
CONECT   11   12   95   96
CONECT   12   13   17   97
CONECT   13   14   28   98
CONECT   14   15   19   99
CONECT   15   16  100  101
CONECT   16   17  102  103
CONECT   17   18
CONECT   18  104  105  106
CONECT   19   20   21   26
CONECT   20  107  108  109
CONECT   21   22  110  111
CONECT   22   23  112  113
CONECT   23   24   25  114
CONECT   24  115
CONECT   25   26  116  117
CONECT   26   27  118
CONECT   27   28  119  120
CONECT   28   29  121
CONECT   29  122
CONECT   30   31   31   32
CONECT   32   33
CONECT   33   34  123  124
CONECT   34   35  125  126
CONECT   35   36  127
CONECT   36   37   37   38
CONECT   38   39  128  129
CONECT   39   40  130  131
CONECT   40   41  132
CONECT   41   42   42   43
CONECT   43   44   45  133
CONECT   44  134
CONECT   45   46   47   48
CONECT   46  135  136  137
CONECT   47  138  139  140
CONECT   48   49  141  142
CONECT   49   50
CONECT   50   51   51   52   53
CONECT   52  143
CONECT   53   54
CONECT   54   55   55   56   57
CONECT   56  144
CONECT   57   58
CONECT   58   59  145  146
CONECT   59   60   74  147
CONECT   60   61
CONECT   61   62   72  148
CONECT   62   63   71
CONECT   63   64   64  149
CONECT   64   65
CONECT   65   66   66   71
CONECT   66   67   68
CONECT   67  150  151
CONECT   68   69   69
CONECT   69   70  152
CONECT   70   71   71
CONECT   72   73   74  153
CONECT   73  154
CONECT   74   75  155
CONECT   75   76
CONECT   76   77   77   78   79
CONECT   78  156
CONECT   79  157
END
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SMILES for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)

[H][C@@]12C[C@H](O)CC[C@]1(C)C1CC[C@]3(C)C(CCC3C1[C@H](O)C2)C(C)CCC(=O)C(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N
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INCHI for HMDB0006896 (3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA)

InChI=1S/C48H78N7O20P3S/c1-25(29-8-9-30-36-31(12-15-48(29,30)6)47(5)14-11-28(56)19-27(47)20-33(36)58)7-10-32(57)26(2)45(63)79-18-17-50-35(59)13-16-51-43(62)40(61)46(3,4)22-72-78(69,70)75-77(67,68)71-21-34-39(74-76(64,65)66)38(60)44(73-34)55-24-54-37-41(49)52-23-53-42(37)55/h23-31,33-34,36,38-40,44,56,58,60-61H,7-22H2,1-6H3,(H,50,59)(H,51,62)(H,67,68)(H,69,70)(H2,49,52,53)(H2,64,65,66)/t25?,26?,27-,28+,29?,30?,31?,33+,34+,36?,38+,39+,40?,44+,47-,48+/m0/s1
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View in JSmolView Stereo Labels
Synonyms
ValueSource
3a,7a-Dihydroxy-5b-24-oxocholestanoyl-coenzyme AHMDB
3alpha,7alpha-Dihydroxy-5beta-24-oxocholestanoyl-CoAHMDB
3alpha,7alpha-Dihydroxy-5beta-24-oxocholestanoyl-coenzyme AHMDB
4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulfanyl)ethyl]-C-hydroxycarbonimidoyl}ethyl)-2-hydroxy-3,3-dimethylbutanimidateGenerator
4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulphanyl)ethyl]-C-hydroxycarbonimidoyl}ethyl)-2-hydroxy-3,3-dimethylbutanimidateGenerator
4-({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)-N-(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulphanyl)ethyl]-C-hydroxycarbonimidoyl}ethyl)-2-hydroxy-3,3-dimethylbutanimidic acidGenerator
Chemical FormulaC48H78N7O20P3S
Average Molecular Weight1198.154
Monoisotopic Molecular Weight1197.423518197
IUPAC Name{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-2-[({[({3-[(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxy}phosphonic acid
Traditional Name[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-2-{[({3-[(2-{[2-({6-[(2S,5R,7S,9R,15R)-5,9-dihydroxy-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecan-14-yl]-2-methyl-3-oxoheptanoyl}sulfanyl)ethyl]carbamoyl}ethyl)carbamoyl]-3-hydroxy-2,2-dimethylpropoxy(hydroxy)phosphoryl}oxy(hydroxy)phosphoryl)oxy]methyl}-4-hydroxyoxolan-3-yl]oxyphosphonic acid
CAS Registry NumberNot Available
SMILES
[H][C@@]12C[C@H](O)CC[C@]1(C)C1CC[C@]3(C)C(CCC3C1[C@H](O)C2)C(C)CCC(=O)C(C)C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N
InChI Identifier
InChI=1S/C48H78N7O20P3S/c1-25(29-8-9-30-36-31(12-15-48(29,30)6)47(5)14-11-28(56)19-27(47)20-33(36)58)7-10-32(57)26(2)45(63)79-18-17-50-35(59)13-16-51-43(62)40(61)46(3,4)22-72-78(69,70)75-77(67,68)71-21-34-39(74-76(64,65)66)38(60)44(73-34)55-24-54-37-41(49)52-23-53-42(37)55/h23-31,33-34,36,38-40,44,56,58,60-61H,7-22H2,1-6H3,(H,50,59)(H,51,62)(H,67,68)(H,69,70)(H2,49,52,53)(H2,64,65,66)/t25?,26?,27-,28+,29?,30?,31?,33+,34+,36?,38+,39+,40?,44+,47-,48+/m0/s1
InChI KeyQWTJBRPOHKIMDT-XWFLEUKDSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as 3-oxo-acyl coas. These are organic compounds containing a 3-oxo acylated coenzyme A derivative.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acyl thioesters
Direct Parent3-oxo-acyl CoAs
Alternative Parents
Substituents
  • Coenzyme a or derivatives
  • Purine ribonucleoside 3',5'-bisphosphate
  • Purine ribonucleoside bisphosphate
  • Purine ribonucleoside diphosphate
  • Steroidal glycoside
  • Dihydroxy bile acid, alcohol, or derivatives
  • 24-oxosteroid
  • Hydroxy bile acid, alcohol, or derivatives
  • Cholane-skeleton
  • Bile acid, alcohol, or derivatives
  • 3-hydroxysteroid
  • Hydroxysteroid
  • Oxosteroid
  • 3-alpha-hydroxysteroid
  • 7-hydroxysteroid
  • Steroid
  • Ribonucleoside 3'-phosphate
  • Pentose phosphate
  • Pentose-5-phosphate
  • Glycosyl compound
  • N-glycosyl compound
  • Beta amino acid or derivatives
  • Monosaccharide phosphate
  • Organic pyrophosphate
  • 6-aminopurine
  • Pentose monosaccharide
  • Imidazopyrimidine
  • Purine
  • Monoalkyl phosphate
  • Aminopyrimidine
  • Fatty amide
  • Monosaccharide
  • N-acyl-amine
  • N-substituted imidazole
  • Organic phosphoric acid derivative
  • Pyrimidine
  • Alkyl phosphate
  • Imidolactam
  • 1,3-dicarbonyl compound
  • Phosphoric acid ester
  • Imidazole
  • Azole
  • Heteroaromatic compound
  • Tetrahydrofuran
  • Cyclic alcohol
  • Carbothioic s-ester
  • Secondary alcohol
  • Thiocarboxylic acid ester
  • Amino acid or derivatives
  • Ketone
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Azacycle
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Thiocarboxylic acid or derivatives
  • Sulfenyl compound
  • Oxacycle
  • Primary amine
  • Organopnictogen compound
  • Organic nitrogen compound
  • Carbonyl group
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organonitrogen compound
  • Organooxygen compound
  • Amine
  • Organosulfur compound
  • Alcohol
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Disposition

Biological location

Source

Route of exposure

Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Spectral PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.8 g/LALOGPS
logP10(1.48) g/LALOGPS
logP10(-2.3) g/LChemAxon
logS10(-3.2) g/LALOGPS
pKa (Strongest Acidic)0.83ChemAxon
pKa (Strongest Basic)4.95ChemAxon
Physiological Charge-4ChemAxon
Hydrogen Acceptor Count20ChemAxon
Hydrogen Donor Count11ChemAxon
Polar Surface Area421.16 ŲChemAxon
Rotatable Bond Count26ChemAxon
Refractivity283.31 m³·mol⁻¹ChemAxon
Polarizability118.54 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Spectral Properties

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 10V, Positive-QTOFsplash10-000i-1900011000-ee37845dcec7f534b9492017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 20V, Positive-QTOFsplash10-000i-0900224000-2ac4acd3a7a592025c9b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 40V, Positive-QTOFsplash10-000i-1900011000-eba9ad2646b815c5653d2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 10V, Negative-QTOFsplash10-0059-2900431400-c3b2261f65b65612d0a42017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 20V, Negative-QTOFsplash10-003r-3900211010-7af67f1bdda03ff5f92b2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 40V, Negative-QTOFsplash10-057i-5900100000-274586d0a37c06be3a7a2017-09-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 10V, Positive-QTOFsplash10-000t-0910000000-5227de7e037e6fc18dab2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 20V, Positive-QTOFsplash10-01q0-0900000011-0b2317c4d491e46a73772021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 40V, Positive-QTOFsplash10-0006-0000019000-3349b28b210614d4616c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 10V, Negative-QTOFsplash10-0002-0900000000-b3d487f70b4ec1efc5b12021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 20V, Negative-QTOFsplash10-002b-1900401100-47eeb25caf0cd319c8252021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA 40V, Negative-QTOFsplash10-05ra-7604804900-b37dd229af4ceda615572021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB024143
KNApSAcK IDNot Available
Chemspider ID389555
KEGG Compound IDC05449
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound440676
PDB IDNot Available
ChEBI ID28533
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. St-Pierre MV, Kullak-Ublick GA, Hagenbuch B, Meier PJ: Transport of bile acids in hepatic and non-hepatic tissues. J Exp Biol. 2001 May;204(Pt 10):1673-86. [PubMed:11316487 ]
  2. Claudel T, Staels B, Kuipers F: The Farnesoid X receptor: a molecular link between bile acid and lipid and glucose metabolism. Arterioscler Thromb Vasc Biol. 2005 Oct;25(10):2020-30. Epub 2005 Jul 21. [PubMed:16037564 ]
  3. Chiang JY: Bile acid regulation of hepatic physiology: III. Bile acids and nuclear receptors. Am J Physiol Gastrointest Liver Physiol. 2003 Mar;284(3):G349-56. [PubMed:12576301 ]
  4. Davis RA, Miyake JH, Hui TY, Spann NJ: Regulation of cholesterol-7alpha-hydroxylase: BAREly missing a SHP. J Lipid Res. 2002 Apr;43(4):533-43. [PubMed:11907135 ]

Enzymes

Enzyme Details
1. 3-ketoacyl-CoA thiolase, peroxisomal
General function:
Involved in transferase activity, transferring acyl groups other than amino-acyl groups
Specific function:
Not Available
Gene Name:
ACAA1
Uniprot ID:
P09110
Molecular weight:
34664.46
Enzyme Details
2. Trifunctional enzyme subunit beta, mitochondrial
General function:
Involved in transferase activity, transferring acyl groups other than amino-acyl groups
Specific function:
Not Available
Gene Name:
HADHB
Uniprot ID:
P55084
Molecular weight:
51293.955
Enzyme Details
3. Non-specific lipid-transfer protein
General function:
Involved in oxidoreductase activity
Specific function:
Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.
Gene Name:
SCP2
Uniprot ID:
P22307
Molecular weight:
34974.505
Reactions
Propionyl-CoA + Chenodeoxycholoyl-CoA → Coenzyme A + 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoAdetails
Enzyme Details
4. Peroxisomal multifunctional enzyme type 2
General function:
Involved in oxidoreductase activity
Specific function:
Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.
Gene Name:
HSD17B4
Uniprot ID:
P51659
Molecular weight:
79685.715
Reactions
3 alpha,7 alpha,24-Trihydroxy-5beta-cholestanoyl-CoA + NAD → 3a,7a-Dihydroxy-5b-24-oxocholestanoyl-CoA + NADH + Hydrogen Iondetails