| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-06 15:16:49 UTC |
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| Update Date | 2022-03-07 02:51:40 UTC |
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| HMDB ID | HMDB0014568 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | Hyoscyamine |
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| Description | Hyoscyamine is a chemical compound, a tropane alkaloid it is the levo-isomer to atropine. It is a secondary metabolite of some plants, particularly henbane (Hyoscamus niger.). Hyoscyamine is used to provide symptomatic relief to various gastrointestinal disorders including spasms, peptic ulcers, irritable bowel syndrome, pancreatitis, colic and cystitis. It has also been used to relieve some heart problems, control some of the symptoms of Parkinson's disease, as well as for control of respiratory secretions in end of life care. |
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| Structure | CN1[C@H]2CC[C@@H]1C[C@@H](C2)OC(=O)[C@H](CO)C1=CC=CC=C1 InChI=1S/C17H23NO3/c1-18-13-7-8-14(18)10-15(9-13)21-17(20)16(11-19)12-5-3-2-4-6-12/h2-6,13-16,19H,7-11H2,1H3/t13-,14+,15+,16-/m1/s1 |
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| Synonyms | | Value | Source |
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| (-)-Atropine | ChEBI | | (-)-Hyoscyamine | ChEBI | | (S)-(-)-Hyoscyamine | ChEBI | | [3(S)-endo]-alpha-(Hydroxymethyl)benzeneacetic acid 8-methyl-8-azabicyclo[3.2.1]oct-3-yl ester | ChEBI | | Daturine | ChEBI | | Duboisine | ChEBI | | L-Hyoscyamine | ChEBI | | L-Tropine tropate | ChEBI | | Tropine, (-)-tropate | ChEBI | | [3(S)-endo]-a-(Hydroxymethyl)benzeneacetate 8-methyl-8-azabicyclo[3.2.1]oct-3-yl ester | Generator | | [3(S)-endo]-a-(Hydroxymethyl)benzeneacetic acid 8-methyl-8-azabicyclo[3.2.1]oct-3-yl ester | Generator | | [3(S)-endo]-alpha-(Hydroxymethyl)benzeneacetate 8-methyl-8-azabicyclo[3.2.1]oct-3-yl ester | Generator | | [3(S)-endo]-Α-(hydroxymethyl)benzeneacetate 8-methyl-8-azabicyclo[3.2.1]oct-3-yl ester | Generator | | [3(S)-endo]-Α-(hydroxymethyl)benzeneacetic acid 8-methyl-8-azabicyclo[3.2.1]oct-3-yl ester | Generator | | L-Tropine tropic acid | Generator | | Tropine, (-)-tropic acid | Generator | | (Leo)-atropine | HMDB | | (Leo)-hyoscyamine | HMDB | | (S)-(Leo)-hyoscyamine | HMDB | | (S)Atropine | HMDB | | Hyocyamine | HMDB | | L-Atropine | HMDB | | L-Hyopscyamine | HMDB | | L-Hyoscamine | HMDB | | Hyoscyamine | ChEBI |
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| Chemical Formula | C17H23NO3 |
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| Average Molecular Weight | 289.3694 |
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| Monoisotopic Molecular Weight | 289.167793607 |
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| IUPAC Name | (1R,3S,5S)-8-methyl-8-azabicyclo[3.2.1]octan-3-yl (2S)-3-hydroxy-2-phenylpropanoate |
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| Traditional Name | L-hyoscyamine |
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| CAS Registry Number | 101-31-5 |
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| SMILES | CN1[C@H]2CC[C@@H]1C[C@@H](C2)OC(=O)[C@H](CO)C1=CC=CC=C1 |
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| InChI Identifier | InChI=1S/C17H23NO3/c1-18-13-7-8-14(18)10-15(9-13)21-17(20)16(11-19)12-5-3-2-4-6-12/h2-6,13-16,19H,7-11H2,1H3/t13-,14+,15+,16-/m1/s1 |
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| InChI Key | RKUNBYITZUJHSG-FXUDXRNXSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as tropane alkaloids. These are organic compounds containing the nitrogenous bicyclic alkaloid parent N-Methyl-8-azabicyclo[3.2.1]Octane. |
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| Kingdom | Organic compounds |
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| Super Class | Alkaloids and derivatives |
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| Class | Tropane alkaloids |
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| Sub Class | Not Available |
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| Direct Parent | Tropane alkaloids |
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| Alternative Parents | |
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| Substituents | - Tropane alkaloid
- Beta-hydroxy acid
- Monocyclic benzene moiety
- Hydroxy acid
- Piperidine
- Benzenoid
- N-alkylpyrrolidine
- Pyrrolidine
- Amino acid or derivatives
- Carboxylic acid ester
- Tertiary aliphatic amine
- Tertiary amine
- Carboxylic acid derivative
- Monocarboxylic acid or derivatives
- Azacycle
- Organoheterocyclic compound
- Organonitrogen compound
- Amine
- Hydrocarbon derivative
- Organic oxide
- Alcohol
- Carbonyl group
- Organopnictogen compound
- Organic oxygen compound
- Organooxygen compound
- Organic nitrogen compound
- Primary alcohol
- Aromatic heteropolycyclic compound
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| Molecular Framework | Aromatic heteropolycyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | Not Available |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Solid |
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| Experimental Molecular Properties | | Property | Value | Reference |
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| Melting Point | 141 °C | Not Available | | Boiling Point | Not Available | Not Available | | Water Solubility | 2.52 g/L | Not Available | | LogP | 1.8 | Not Available |
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| Experimental Chromatographic Properties | Experimental Collision Cross Sections |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter)). Predicted by Afia on May 17, 2022. | 4.03 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 10.4528 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 3.28 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 122.7 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatizedDerivatized |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted GC-MS | Predicted GC-MS Spectrum - Hyoscyamine GC-MS (Non-derivatized) - 70eV, Positive | splash10-00di-5900000000-f705f96b0219dcd47d66 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Hyoscyamine GC-MS (1 TMS) - 70eV, Positive | splash10-0006-4900000000-d0c3228da9df55297f7b | 2017-10-06 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Hyoscyamine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - Hyoscyamine GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | | MS | Mass Spectrum (Electron Ionization) | splash10-00di-9810000000-bdd60b3a23f97899d426 | 2014-09-20 | Not Available | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Experimental LC-MS/MS | LC-MS/MS Spectrum - Hyoscyamine LC-ESI-qTof , Positive-QTOF | splash10-006x-6951100000-43127e046c478d2643e1 | 2017-09-14 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - Hyoscyamine , positive-QTOF | splash10-006x-6951100000-43127e046c478d2643e1 | 2017-09-14 | HMDB team, MONA | View Spectrum | | Experimental LC-MS/MS | LC-MS/MS Spectrum - Hyoscyamine 35V, Positive-QTOF | splash10-006x-6960000000-96b74c70ce0011e5968d | 2021-09-20 | HMDB team, MONA | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 10V, Positive-QTOF | splash10-00dl-0790000000-b3809a4d9f3d53472626 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 20V, Positive-QTOF | splash10-00di-1920000000-5cf6a284aa0360bfa6f5 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 40V, Positive-QTOF | splash10-0g02-2900000000-03a359b67b71a8d41b5a | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 10V, Negative-QTOF | splash10-000i-0490000000-42268e6db552a2d85a66 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 20V, Negative-QTOF | splash10-05g3-1960000000-db1243e11ae5ea609f09 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 40V, Negative-QTOF | splash10-00bc-5900000000-3453e9ae42b1ccba243c | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 10V, Positive-QTOF | splash10-0006-0090000000-38746560650547c38a28 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 20V, Positive-QTOF | splash10-006x-1590000000-abf830c79515feb657d2 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 40V, Positive-QTOF | splash10-006y-9500000000-28e9eb9a8330fa4c60d9 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 10V, Negative-QTOF | splash10-000i-0490000000-4b2dacd04cd09b1229da | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 20V, Negative-QTOF | splash10-0g4r-1910000000-6bc43ea9e9a781364124 | 2021-09-22 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Hyoscyamine 40V, Negative-QTOF | splash10-014i-1910000000-9a0fd9e7ddf07814092b | 2021-09-22 | Wishart Lab | View Spectrum |
NMR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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