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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:30:44 UTC
Update Date2022-03-07 02:52:11 UTC
HMDB IDHMDB0029494
Secondary Accession Numbers
  • HMDB29494
Metabolite Identification
Common NameFormononetin 7-(6''-methylmalonylglucoside)
DescriptionFormononetin 7-(6''-methylmalonylglucoside) belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one. Based on a literature review very few articles have been published on Formononetin 7-(6''-methylmalonylglucoside).
Structure
Data?1582753426
Synonyms
ValueSource
1-Methyl 3-(3,4,5-trihydroxy-6-{[3-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl)methyl propanedioic acidHMDB
Chemical FormulaC26H26O12
Average Molecular Weight530.4774
Monoisotopic Molecular Weight530.142426296
IUPAC Name1-methyl 3-(3,4,5-trihydroxy-6-{[3-(4-methoxyphenyl)-4-oxo-4H-chromen-7-yl]oxy}oxan-2-yl)methyl propanedioate
Traditional Name1-methyl 3-(3,4,5-trihydroxy-6-{[3-(4-methoxyphenyl)-4-oxochromen-7-yl]oxy}oxan-2-yl)methyl propanedioate
CAS Registry Number34232-18-3
SMILES
COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(OC=C(C3=O)C3=CC=C(OC)C=C3)=C2)C(O)C(O)C1O
InChI Identifier
InChI=1S/C26H26O12/c1-33-14-5-3-13(4-6-14)17-11-35-18-9-15(7-8-16(18)22(17)29)37-26-25(32)24(31)23(30)19(38-26)12-36-21(28)10-20(27)34-2/h3-9,11,19,23-26,30-32H,10,12H2,1-2H3
InChI KeyDQNRUSGVMUYAHO-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as isoflavonoid o-glycosides. These are o-glycosylated derivatives of isoflavonoids, which are natural products derived from 3-phenylchromen-4-one.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassIsoflavonoids
Sub ClassIsoflavonoid O-glycosides
Direct ParentIsoflavonoid O-glycosides
Alternative Parents
Substituents
  • Isoflavonoid o-glycoside
  • Isoflavonoid-7-o-glycoside
  • 4p-o-methylisoflavone
  • Isoflavone
  • Phenolic glycoside
  • O-glycosyl compound
  • Glycosyl compound
  • Chromone
  • Benzopyran
  • 1-benzopyran
  • Phenoxy compound
  • Anisole
  • Methoxybenzene
  • Phenol ether
  • Alkyl aryl ether
  • Pyranone
  • Monocyclic benzene moiety
  • Benzenoid
  • Dicarboxylic acid or derivatives
  • Pyran
  • Oxane
  • 1,3-dicarbonyl compound
  • Monosaccharide
  • Heteroaromatic compound
  • Methyl ester
  • Carboxylic acid ester
  • Secondary alcohol
  • Polyol
  • Acetal
  • Carboxylic acid derivative
  • Organoheterocyclic compound
  • Oxacycle
  • Ether
  • Organic oxygen compound
  • Carbonyl group
  • Hydrocarbon derivative
  • Organic oxide
  • Alcohol
  • Organooxygen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point198 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.24 g/LALOGPS
logP1.58ALOGPS
logP1.09ChemAxon
logS-3.4ALOGPS
pKa (Strongest Acidic)12.13ChemAxon
pKa (Strongest Basic)-3.6ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count10ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area167.28 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity126.59 m³·mol⁻¹ChemAxon
Polarizability52.35 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+223.13531661259
DarkChem[M-H]-219.19431661259
DeepCCS[M+H]+214.07230932474
DeepCCS[M-H]-211.67630932474
DeepCCS[M-2H]-244.5630932474
DeepCCS[M+Na]+219.98430932474
AllCCS[M+H]+220.532859911
AllCCS[M+H-H2O]+218.932859911
AllCCS[M+NH4]+222.032859911
AllCCS[M+Na]+222.432859911
AllCCS[M-H]-216.432859911
AllCCS[M+Na-2H]-218.032859911
AllCCS[M+HCOO]-219.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Formononetin 7-(6''-methylmalonylglucoside)COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(OC=C(C3=O)C3=CC=C(OC)C=C3)=C2)C(O)C(O)C1O5530.8Standard polar33892256
Formononetin 7-(6''-methylmalonylglucoside)COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(OC=C(C3=O)C3=CC=C(OC)C=C3)=C2)C(O)C(O)C1O4104.5Standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside)COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(OC=C(C3=O)C3=CC=C(OC)C=C3)=C2)C(O)C(O)C1O4769.2Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Formononetin 7-(6''-methylmalonylglucoside),1TMS,isomer #1COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O)C1O4426.4Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),1TMS,isomer #2COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C)C1O4418.6Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),1TMS,isomer #3COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O)C(O)C1O[Si](C)(C)C4432.5Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),2TMS,isomer #1COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O4301.8Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),2TMS,isomer #2COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O)C1O[Si](C)(C)C4324.5Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),2TMS,isomer #3COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C)C1O[Si](C)(C)C4310.9Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),3TMS,isomer #1COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C1O[Si](C)(C)C4245.9Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),1TBDMS,isomer #1COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O)C1O4702.0Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),1TBDMS,isomer #2COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C(C)(C)C)C1O4684.7Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),1TBDMS,isomer #3COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O)C(O)C1O[Si](C)(C)C(C)(C)C4708.4Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),2TBDMS,isomer #1COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O4823.8Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),2TBDMS,isomer #2COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O)C1O[Si](C)(C)C(C)(C)C4855.4Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),2TBDMS,isomer #3COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C4832.4Semi standard non polar33892256
Formononetin 7-(6''-methylmalonylglucoside),3TBDMS,isomer #1COC(=O)CC(=O)OCC1OC(OC2=CC=C3C(=O)C(C4=CC=C(OC)C=C4)=COC3=C2)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C1O[Si](C)(C)C(C)(C)C4975.9Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (Non-derivatized) - 70eV, Positivesplash10-03dj-3491350000-a58dd2b48d528261e1e72017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (2 TMS) - 70eV, Positivesplash10-0a4i-6581359000-9e71e753c4045ddbd6772017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TMS_1_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TMS_2_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TMS_2_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TMS_3_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_1_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_2_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_2_2) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_2_3) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS (TBDMS_3_1) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) GC-MS ("Formononetin 7-(6''-methylmalonylglucoside),1TMS,#1" TMS) - 70eV, PositiveNot Available2021-10-14Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 10V, Positive-QTOFsplash10-014i-0290750000-825c8857f752cb40c2dd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 20V, Positive-QTOFsplash10-014i-0190100000-1d6f32adeb03da90bce42016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 40V, Positive-QTOFsplash10-014i-1490000000-e0300993d729d24443ff2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 10V, Negative-QTOFsplash10-014j-9550350000-4a08ae99aac75d37d0d22016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 20V, Negative-QTOFsplash10-014i-9380100000-43a2fc40e77beaf442802016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 40V, Negative-QTOFsplash10-014i-5390000000-a98da990dc7e3e3e44302016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 10V, Negative-QTOFsplash10-014i-1090100000-bb818380672c7ef0aefe2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 20V, Negative-QTOFsplash10-014i-4094700000-844d8e1c610503e8058d2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 40V, Negative-QTOFsplash10-00rg-6390010000-89e090909293c6b77e252021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 10V, Positive-QTOFsplash10-014i-0090010000-908d957f2837755294702021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 20V, Positive-QTOFsplash10-0159-0595820000-98f32475015125d14f3c2021-09-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Formononetin 7-(6''-methylmalonylglucoside) 40V, Positive-QTOFsplash10-00rg-9331000000-a0dd172194ff7f027c972021-09-24Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB000627
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131750878
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .

Enzymes

General function:
Lipid transport and metabolism
Specific function:
Involved in the detoxification of xenobiotics and in the activation of ester and amide prodrugs. Hydrolyzes aromatic and aliphatic esters, but has no catalytic activity toward amides or a fatty acyl-CoA ester. Hydrolyzes the methyl ester group of cocaine to form benzoylecgonine. Catalyzes the transesterification of cocaine to form cocaethylene. Displays fatty acid ethyl ester synthase activity, catalyzing the ethyl esterification of oleic acid to ethyloleate.
Gene Name:
CES1
Uniprot ID:
P23141
Molecular weight:
62520.62
Reactions
Formononetin 7-(6''-methylmalonylglucoside) → Formononetin 7-(6''-malonylglucoside)details