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Showing metabocard for Cyclohexanecarboxylic acid (HMDB0031342)

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Record Information
Version5.0
StatusDetected and Quantified
Creation Date2012-09-11 17:42:25 UTC
Update Date2023-02-21 17:20:26 UTC
HMDB IDHMDB0031342
Secondary Accession Numbers
  • HMDB31342
Metabolite Identification
Common NameCyclohexanecarboxylic acid
DescriptionCyclohexanecarboxylic acid, also known as hexahydrobenzoic acid or carboxycyclohexane, belongs to the class of organic compounds known as carboxylic acids. Carboxylic acids are compounds containing a carboxylic acid group with the formula -C(=O)OH. Cyclohexanecarboxylic acid exists in all living organisms, ranging from bacteria to humans. Cyclohexanecarboxylic acid is an acidic, cheese, and fruity tasting compound. Cyclohexanecarboxylic acid is a primary metabolite. Primary metabolites are metabolically or physiologically essential metabolites. They are directly involved in an organism’s growth, development or reproduction. Based on a literature review a small amount of articles have been published on Cyclohexanecarboxylic acid.
Structure
Data?1677000026
MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0031342 (Cyclohexanecarboxylic acid)


  Mrv0541 05061305532D          

  9  9  0  0  0  0            999 V2000
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  1  0  0  0  0
  6  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  2  0  0  0  0
  9  7  1  0  0  0  0
M  END
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3D MOL for HMDB0031342 (Cyclohexanecarboxylic acid)

HMDB0031342
     RDKit          3D
Cyclohexanecarboxylic acid
 21 21  0  0  0  0  0  0  0  0999 V2000
    2.7160   -1.6311   -0.7944 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1619   -0.7269   -0.0961 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9883   -0.0362    0.7727 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7440   -0.4524   -0.2197 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4366    0.9792   -0.6555 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0096    0.9136   -1.1639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8957    0.6609    0.0327 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5001   -0.6671    0.6639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0320   -0.6590    1.0720 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9715   -0.1669    0.8462 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2853   -1.1396   -0.9634 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4668    1.5938    0.2722 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1328    1.3083   -1.4298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0364   -0.0036   -1.8154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3159    1.8217   -1.6742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7596    1.4543    0.7831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9543    0.5563   -0.2691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5754   -1.4519   -0.1458 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1629   -0.9574    1.4786 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1497    0.2146    1.7504 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1892   -1.6106    1.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9  4  1  0
  3 10  1  0
  4 11  1  0
  5 12  1  0
  5 13  1  0
  6 14  1  0
  6 15  1  0
  7 16  1  0
  7 17  1  0
  8 18  1  0
  8 19  1  0
  9 20  1  0
  9 21  1  0
M  END
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3D SDF for HMDB0031342 (Cyclohexanecarboxylic acid)


  Mrv0541 05061305532D          

  9  9  0  0  0  0            999 V2000
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    2.0625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    2.4750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  1  0  0  0  0
  6  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  2  0  0  0  0
  9  7  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0031342

> <DATABASE_NAME>
hmdb

> <SMILES>
OC(=O)C1CCCCC1

> <INCHI_IDENTIFIER>
InChI=1S/C7H12O2/c8-7(9)6-4-2-1-3-5-6/h6H,1-5H2,(H,8,9)

> <INCHI_KEY>
NZNMSOFKMUBTKW-UHFFFAOYSA-N

> <FORMULA>
C7H12O2

> <MOLECULAR_WEIGHT>
128.169

> <EXACT_MASS>
128.083729628

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_AVERAGE_POLARIZABILITY>
14.030451156318712

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
1

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
cyclohexanecarboxylic acid

> <ALOGPS_LOGP>
1.88

> <JCHEM_LOGP>
1.8901565033333334

> <ALOGPS_LOGS>
-1.20

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-1

> <JCHEM_PKA_STRONGEST_ACIDIC>
4.819196195175946

> <JCHEM_POLAR_SURFACE_AREA>
37.3

> <JCHEM_REFRACTIVITY>
33.8459

> <JCHEM_ROTATABLE_BOND_COUNT>
1

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
8.01e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
cyclohexanecarboxylic acid

> <JCHEM_VEBER_RULE>
1

$$$$
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3D-SDF for HMDB0031342 (Cyclohexanecarboxylic acid)

HMDB0031342
     RDKit          3D
Cyclohexanecarboxylic acid
 21 21  0  0  0  0  0  0  0  0999 V2000
    2.7160   -1.6311   -0.7944 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1619   -0.7269   -0.0961 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9883   -0.0362    0.7727 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.7440   -0.4524   -0.2197 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4366    0.9792   -0.6555 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0096    0.9136   -1.1639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8957    0.6609    0.0327 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5001   -0.6671    0.6639 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0320   -0.6590    1.0720 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9715   -0.1669    0.8462 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2853   -1.1396   -0.9634 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4668    1.5938    0.2722 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1328    1.3083   -1.4298 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0364   -0.0036   -1.8154 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3159    1.8217   -1.6742 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7596    1.4543    0.7831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9543    0.5563   -0.2691 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5754   -1.4519   -0.1458 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1629   -0.9574    1.4786 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1497    0.2146    1.7504 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1892   -1.6106    1.5556 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9  4  1  0
  3 10  1  0
  4 11  1  0
  5 12  1  0
  5 13  1  0
  6 14  1  0
  6 15  1  0
  7 16  1  0
  7 17  1  0
  8 18  1  0
  8 19  1  0
  9 20  1  0
  9 21  1  0
M  END
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PDB for HMDB0031342 (Cyclohexanecarboxylic acid)

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       0.000   0.000   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       0.000   1.540   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       1.334   3.850   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0       0.000   4.620   0.000  0.00  0.00           O+0
HETATM    9  O   UNK     0       2.667   4.620   0.000  0.00  0.00           O+0
CONECT    1    2    3                                                       
CONECT    2    1    4                                                       
CONECT    3    1    5                                                       
CONECT    4    2    6                                                       
CONECT    5    3    6                                                       
CONECT    6    4    5    7                                                  
CONECT    7    6    8    9                                                  
CONECT    8    7                                                            
CONECT    9    7                                                            
MASTER        0    0    0    0    0    0    0    0    9    0   18    0
END
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3D PDB for HMDB0031342 (Cyclohexanecarboxylic acid)

COMPND    HMDB0031342
HETATM    1  O1  UNL     1       2.716  -1.631  -0.794  1.00  0.00           O  
HETATM    2  C1  UNL     1       2.162  -0.727  -0.096  1.00  0.00           C  
HETATM    3  O2  UNL     1       2.988  -0.036   0.773  1.00  0.00           O  
HETATM    4  C2  UNL     1       0.744  -0.452  -0.220  1.00  0.00           C  
HETATM    5  C3  UNL     1       0.437   0.979  -0.655  1.00  0.00           C  
HETATM    6  C4  UNL     1      -1.010   0.914  -1.164  1.00  0.00           C  
HETATM    7  C5  UNL     1      -1.896   0.661   0.033  1.00  0.00           C  
HETATM    8  C6  UNL     1      -1.500  -0.667   0.664  1.00  0.00           C  
HETATM    9  C7  UNL     1      -0.032  -0.659   1.072  1.00  0.00           C  
HETATM   10  H1  UNL     1       3.971  -0.167   0.846  1.00  0.00           H  
HETATM   11  H2  UNL     1       0.285  -1.140  -0.963  1.00  0.00           H  
HETATM   12  H3  UNL     1       0.467   1.594   0.272  1.00  0.00           H  
HETATM   13  H4  UNL     1       1.133   1.308  -1.430  1.00  0.00           H  
HETATM   14  H5  UNL     1      -1.036  -0.004  -1.815  1.00  0.00           H  
HETATM   15  H6  UNL     1      -1.316   1.822  -1.674  1.00  0.00           H  
HETATM   16  H7  UNL     1      -1.760   1.454   0.783  1.00  0.00           H  
HETATM   17  H8  UNL     1      -2.954   0.556  -0.269  1.00  0.00           H  
HETATM   18  H9  UNL     1      -1.575  -1.452  -0.146  1.00  0.00           H  
HETATM   19  H10 UNL     1      -2.163  -0.957   1.479  1.00  0.00           H  
HETATM   20  H11 UNL     1       0.150   0.215   1.750  1.00  0.00           H  
HETATM   21  H12 UNL     1       0.189  -1.611   1.556  1.00  0.00           H  
CONECT    1    2    2
CONECT    2    3    4
CONECT    3   10
CONECT    4    5    9   11
CONECT    5    6   12   13
CONECT    6    7   14   15
CONECT    7    8   16   17
CONECT    8    9   18   19
CONECT    9   20   21
END
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SMILES for HMDB0031342 (Cyclohexanecarboxylic acid)

OC(=O)C1CCCCC1
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INCHI for HMDB0031342 (Cyclohexanecarboxylic acid)

InChI=1S/C7H12O2/c8-7(9)6-4-2-1-3-5-6/h6H,1-5H2,(H,8,9)
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View in JSmolView NMR AssignmentsView Stereo Labels
Synonyms
ValueSource
CarboxycyclohexaneChEBI
CyclohexancarbonsaeureChEBI
Cyclohexane-1-carboxylateChEBI
Cyclohexanoic acidChEBI
Cyclohexylcarboxylic acidChEBI
Cyclohexylformic acidChEBI
Cyclohexylmethanoic acidChEBI
Hexahydrobenzoic acidChEBI
Cyclohexane-1-carboxylic acidGenerator
CyclohexanoateGenerator
CyclohexylcarboxylateGenerator
CyclohexylformateGenerator
CyclohexylmethanoateGenerator
HexahydrobenzoateGenerator
CyclohexanecarboxylateGenerator
Cyclohexanecarboxylic acid, calcium saltMeSH
Cyclohexanecarboxylic acid, cobalt saltMeSH
Cyclohexanecarboxylic acid, lead saltMeSH
Cyclohexanecarboxylic acid, potassium saltMeSH
Cyclohexanecarboxylic acid, sodium saltMeSH
Cyclohexanecarboxylic acid, sodium salt, 11C-labeledMeSH
7549-42-0 (Calcium salt)HMDB
FEMA 3531HMDB
hexahydro-Benzoic acidHMDB
Naphthenic acidHMDB
Naphthenoic acidHMDB
Chemical FormulaC7H12O2
Average Molecular Weight128.169
Monoisotopic Molecular Weight128.083729628
IUPAC Namecyclohexanecarboxylic acid
Traditional Namecyclohexanecarboxylic acid
CAS Registry Number98-89-5
SMILES
OC(=O)C1CCCCC1
InChI Identifier
InChI=1S/C7H12O2/c8-7(9)6-4-2-1-3-5-6/h6H,1-5H2,(H,8,9)
InChI KeyNZNMSOFKMUBTKW-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as carboxylic acids. Carboxylic acids are compounds containing a carboxylic acid group with the formula -C(=O)OH.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassCarboxylic acids
Direct ParentCarboxylic acids
Alternative Parents
Substituents
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Organic oxygen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Carbonyl group
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Ontology
Not AvailableNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point31 - 32 °CNot Available
Boiling Point232.00 to 233.00 °C. @ 760.00 mm HgThe Good Scents Company Information System
Water Solubility4.6 mg/mL at 25 °CNot Available
LogP1.96Not Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility8.01 g/LALOGPS
logP1.88ALOGPS
logP1.89ChemAxon
logS-1.2ALOGPS
pKa (Strongest Acidic)4.82ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area37.3 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity33.85 m³·mol⁻¹ChemAxon
Polarizability14.03 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+127.06231661259
DarkChem[M-H]-119.78631661259
DeepCCS[M+H]+133.82930932474
DeepCCS[M-H]-131.31930932474
DeepCCS[M-2H]-167.13230932474
DeepCCS[M+Na]+142.39630932474
AllCCS[M+H]+128.932859911
AllCCS[M+H-H2O]+124.332859911
AllCCS[M+NH4]+133.232859911
AllCCS[M+Na]+134.532859911
AllCCS[M-H]-128.032859911
AllCCS[M+Na-2H]-130.232859911
AllCCS[M+HCOO]-132.632859911

Predicted Retention Times

Underivatized

Chromatographic MethodRetention TimeReference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.3.16 minutes32390414
Predicted by Siyang on May 30, 202211.9863 minutes33406817
Predicted by Siyang using ReTip algorithm on June 8, 20224.46 minutes32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid46.6 seconds40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid1658.1 seconds40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid382.9 seconds40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid137.3 seconds40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid243.6 seconds40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid303.9 seconds40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid431.0 seconds40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid488.5 seconds40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)134.7 seconds40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid993.6 seconds40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid338.1 seconds40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid1087.0 seconds40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid310.9 seconds40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid338.5 seconds40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate488.2 seconds40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA337.8 seconds40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water166.8 seconds40023050

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Cyclohexanecarboxylic acidOC(=O)C1CCCCC11996.5Standard polar33892256
Cyclohexanecarboxylic acidOC(=O)C1CCCCC11088.5Standard non polar33892256
Cyclohexanecarboxylic acidOC(=O)C1CCCCC11175.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Cyclohexanecarboxylic acid,1TMS,isomer #1C[Si](C)(C)OC(=O)C1CCCCC11196.6Semi standard non polar33892256
Cyclohexanecarboxylic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)C1CCCCC11427.7Semi standard non polar33892256
Spectra
Biological Properties
Cellular Locations
  • Cytoplasm
  • Extracellular
Biospecimen Locations
  • Feces
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
FecesDetected and Quantified29.102 +/- 57.424 nmol/g wet fecesNot SpecifiedNot Specified
Normal		 details
FecesDetected and Quantified205.198 +/- 493.879 nmol/g wet fecesNot SpecifiedNot Specified
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedNot SpecifiedNot Specified
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedNot SpecifiedNot Specified
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothNormal details
Abnormal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Campylobacter jejuni infection		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Nonalcoholic fatty liver disease (NAFLD)		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Diarrhea-predominant IBS		 details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothImmunoglobulin A nephropathy (IgAN) non progressor details
FecesDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothImmunoglobulin A nephropathy (IgAN) progressor details
Associated Disorders and Diseases
Disease References
Nonalcoholic fatty liver disease
  1. Raman M, Ahmed I, Gillevet PM, Probert CS, Ratcliffe NM, Smith S, Greenwood R, Sikaroodi M, Lam V, Crotty P, Bailey J, Myers RP, Rioux KP: Fecal microbiome and volatile organic compound metabolome in obese humans with nonalcoholic fatty liver disease. Clin Gastroenterol Hepatol. 2013 Jul;11(7):868-75.e1-3. doi: 10.1016/j.cgh.2013.02.015. Epub 2013 Feb 27. [PubMed:23454028 ]
Diarrhoea predominant irritable bowel syndrome
  1. Ahmed I, Greenwood R, Costello Bde L, Ratcliffe NM, Probert CS: An investigation of fecal volatile organic metabolites in irritable bowel syndrome. PLoS One. 2013;8(3):e58204. doi: 10.1371/journal.pone.0058204. Epub 2013 Mar 13. [PubMed:23516449 ]
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB003406
KNApSAcK IDC00000334
Chemspider ID7135
KEGG Compound IDC09822
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkCyclohexanecarboxylic_acid
METLIN IDNot Available
PubChem Compound7413
PDB IDNot Available
ChEBI ID36096
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1036731
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Mo R, Sun Q, Xue J, Li N, Li W, Zhang C, Ping Q: Multistage pH-responsive liposomes for mitochondrial-targeted anticancer drug delivery. Adv Mater. 2012 Jul 17;24(27):3659-65. doi: 10.1002/adma.201201498. Epub 2012 Jun 8. [PubMed:22678851 ]
  2. BALTES BJ, ELLIOTT WH, DOISY EA Jr, DOISY EA: Biochemical studies of hexahydrobenzoic acid and hexahydrophenylalanine. J Biol Chem. 1952 Feb;194(2):627-34. [PubMed:14927655 ]
  3. MITOMA C, POSNER HS, LEONARD F: Aromatization of hexahydrobenzoic acid by mamalian liver mitochondria. Biochim Biophys Acta. 1958 Jan;27(1):156-60. [PubMed:13510261 ]
  4. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .