Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 17:43:00 UTC
Update Date2022-03-07 02:52:58 UTC
HMDB IDHMDB0031415
Secondary Accession Numbers
  • HMDB31415
Metabolite Identification
Common Name2,6-Dimethyl-2,4-heptadiene
Description2,6-Dimethyl-2,4-heptadiene belongs to the class of organic compounds known as branched unsaturated hydrocarbons. These are hydrocarbons that contains one or more unsaturated carbon atoms, and an aliphatic branch. 2,6-Dimethyl-2,4-heptadiene has been detected, but not quantified in, herbs and spices. This could make 2,6-dimethyl-2,4-heptadiene a potential biomarker for the consumption of these foods. Based on a literature review very few articles have been published on 2,6-Dimethyl-2,4-heptadiene.
Structure
Data?1563862123
Synonyms
ValueSource
AmpcppHMDB
Phosphomethylphosphonic acid adenosyl esterHMDB
Chemical FormulaC9H16
Average Molecular Weight124.2233
Monoisotopic Molecular Weight124.125200512
IUPAC Name(4Z)-2,6-dimethylhepta-2,4-diene
Traditional Name(4Z)-2,6-dimethylhepta-2,4-diene
CAS Registry Number4634-87-1
SMILES
CC(C)\C=C/C=C(C)C
InChI Identifier
InChI=1S/C9H16/c1-8(2)6-5-7-9(3)4/h5-8H,1-4H3/b6-5-
InChI KeyHQTKNGJJNNTBLG-WAYWQWQTSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as branched unsaturated hydrocarbons. These are hydrocarbons that contains one or more unsaturated carbon atoms, and an aliphatic branch.
KingdomOrganic compounds
Super ClassHydrocarbons
ClassUnsaturated hydrocarbons
Sub ClassBranched unsaturated hydrocarbons
Direct ParentBranched unsaturated hydrocarbons
Alternative Parents
Substituents
  • Branched unsaturated hydrocarbon
  • Alkadiene
  • Unsaturated aliphatic hydrocarbon
  • Olefin
  • Acyclic olefin
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility5.82 mg/L @ 25 °C (est)The Good Scents Company Information System
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.35 g/LALOGPS
logP4.17ALOGPS
logP3.38ChemAxon
logS-2.6ALOGPS
Physiological Charge0ChemAxon
Hydrogen Acceptor Count0ChemAxon
Hydrogen Donor Count0ChemAxon
Polar Surface Area0 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity45.07 m³·mol⁻¹ChemAxon
Polarizability16.63 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+132.46431661259
DarkChem[M-H]-127.14631661259
DeepCCS[M+H]+138.61730932474
DeepCCS[M-H]-135.96830932474
DeepCCS[M-2H]-172.43730932474
DeepCCS[M+Na]+147.75230932474
AllCCS[M+H]+126.732859911
AllCCS[M+H-H2O]+122.432859911
AllCCS[M+NH4]+130.732859911
AllCCS[M+Na]+131.932859911
AllCCS[M-H]-129.032859911
AllCCS[M+Na-2H]-131.732859911
AllCCS[M+HCOO]-134.832859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2,6-Dimethyl-2,4-heptadieneCC(C)\C=C/C=C(C)C1184.6Standard polar33892256
2,6-Dimethyl-2,4-heptadieneCC(C)\C=C/C=C(C)C892.6Standard non polar33892256
2,6-Dimethyl-2,4-heptadieneCC(C)\C=C/C=C(C)C899.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2,6-Dimethyl-2,4-heptadiene GC-MS (Non-derivatized) - 70eV, Positivesplash10-05al-9300000000-71bebbb1b0faf96ced202017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2,6-Dimethyl-2,4-heptadiene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2,6-Dimethyl-2,4-heptadiene GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 10V, Positive-QTOFsplash10-004i-1900000000-19e4113abf45a8854adb2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 20V, Positive-QTOFsplash10-004i-7900000000-75659fb5aa654c1738e32016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 40V, Positive-QTOFsplash10-0ldi-9000000000-16e98d64c4f1015531342016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 10V, Negative-QTOFsplash10-00di-0900000000-02796df72f4828046c872016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 20V, Negative-QTOFsplash10-00di-0900000000-c8d13d46dd161f3969832016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 40V, Negative-QTOFsplash10-0ab9-9600000000-86c9a3ec839b95a83a9e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 10V, Negative-QTOFsplash10-00di-0900000000-06652a70e87fd70d72e82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 20V, Negative-QTOFsplash10-00di-0900000000-ce56ddd88640d0be8c882021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 40V, Negative-QTOFsplash10-06tf-9100000000-fd1f577420c3fae9124b2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 10V, Positive-QTOFsplash10-0aor-9200000000-7a71029055190bbc45ff2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 20V, Positive-QTOFsplash10-00lr-9000000000-bc1dc280710893346ff82021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,6-Dimethyl-2,4-heptadiene 40V, Positive-QTOFsplash10-00kf-9000000000-7806937104bf52cbb8292021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB003492
KNApSAcK IDNot Available
Chemspider ID30776901
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound56999211
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDrw1826311
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .