| Record Information |
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| Version | 5.0 |
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| Status | Expected but not Quantified |
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| Creation Date | 2012-09-11 17:44:32 UTC |
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| Update Date | 2023-02-21 17:21:03 UTC |
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| HMDB ID | HMDB0031632 |
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| Secondary Accession Numbers | |
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| Metabolite Identification |
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| Common Name | 1,3-Propanedithiol |
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| Description | 1,3-Propanedithiol, also known as 1,3-dimercaptopropane or trimethylenedithiol, belongs to the class of organic compounds known as alkylthiols. These are organic compounds containing the thiol functional group linked to an alkyl chain. 1,3-Propanedithiol is a meaty and sulfurous tasting compound. Based on a literature review a significant number of articles have been published on 1,3-Propanedithiol. |
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| Structure | InChI=1S/C3H8S2/c4-2-1-3-5/h4-5H,1-3H2 |
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| Synonyms | | Value | Source |
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| 1,3-Dimercaptopropane | ChEBI | | 1,3-Propanedimercaptan | ChEBI | | Dithiotrimethyleneglycol | ChEBI | | Trimethylene dimercaptan | ChEBI | | Trimethylenedithioglycol | ChEBI | | Trimethylenedithiol | ChEBI | | FEMA 3588 | HMDB | | Propane-1,3-dithiol | HMDB | | 1,3-PROPANEDITHIOL | ChEBI |
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| Chemical Formula | C3H8S2 |
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| Average Molecular Weight | 108.226 |
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| Monoisotopic Molecular Weight | 108.006741636 |
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| IUPAC Name | propane-1,3-dithiol |
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| Traditional Name | 1,3-propanedithiol |
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| CAS Registry Number | 109-80-8 |
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| SMILES | SCCCS |
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| InChI Identifier | InChI=1S/C3H8S2/c4-2-1-3-5/h4-5H,1-3H2 |
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| InChI Key | ZJLMKPKYJBQJNH-UHFFFAOYSA-N |
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| Chemical Taxonomy |
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| Description | Belongs to the class of organic compounds known as alkylthiols. These are organic compounds containing the thiol functional group linked to an alkyl chain. |
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| Kingdom | Organic compounds |
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| Super Class | Organosulfur compounds |
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| Class | Thiols |
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| Sub Class | Alkylthiols |
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| Direct Parent | Alkylthiols |
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| Alternative Parents | |
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| Substituents | - Alkylthiol
- Hydrocarbon derivative
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | |
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| Ontology |
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| Physiological effect | |
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| Disposition | |
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| Process | Not Available |
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| Role | |
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| Physical Properties |
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| State | Liquid |
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| Experimental Molecular Properties | |
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| Experimental Chromatographic Properties | Not Available |
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| Predicted Molecular Properties | |
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| Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Retention Times Underivatized| Chromatographic Method | Retention Time | Reference |
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| Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. | 2.13 minutes | 32390414 | | Predicted by Siyang on May 30, 2022 | 16.6469 minutes | 33406817 | | Predicted by Siyang using ReTip algorithm on June 8, 2022 | 3.41 minutes | 32390414 | | AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid | 169.4 seconds | 40023050 | | Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid | 2648.9 seconds | 40023050 | | Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid | 692.5 seconds | 40023050 | | Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid | 244.9 seconds | 40023050 | | Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid | 495.5 seconds | 40023050 | | RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 326.6 seconds | 40023050 | | Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid | 597.3 seconds | 40023050 | | BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid | 775.7 seconds | 40023050 | | HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate) | 1094.6 seconds | 40023050 | | UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid | 1291.6 seconds | 40023050 | | BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid | 355.0 seconds | 40023050 | | UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid | 1400.8 seconds | 40023050 | | SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 507.7 seconds | 40023050 | | RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid | 396.9 seconds | 40023050 | | MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate | 919.0 seconds | 40023050 | | KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA | 653.8 seconds | 40023050 | | Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water | 238.9 seconds | 40023050 |
Predicted Kovats Retention IndicesUnderivatized| Metabolite | SMILES | Kovats RI Value | Column Type | Reference |
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| 1,3-Propanedithiol | SCCCS | 1458.4 | Standard polar | 33892256 | | 1,3-Propanedithiol | SCCCS | 906.1 | Standard non polar | 33892256 | | 1,3-Propanedithiol | SCCCS | 931.0 | Semi standard non polar | 33892256 |
Derivatized| Derivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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| 1,3-Propanedithiol,1TMS,isomer #1 | C[Si](C)(C)SCCCS | 1192.6 | Semi standard non polar | 33892256 | | 1,3-Propanedithiol,1TMS,isomer #1 | C[Si](C)(C)SCCCS | 1141.2 | Standard non polar | 33892256 | | 1,3-Propanedithiol,2TMS,isomer #1 | C[Si](C)(C)SCCCS[Si](C)(C)C | 1400.2 | Semi standard non polar | 33892256 | | 1,3-Propanedithiol,2TMS,isomer #1 | C[Si](C)(C)SCCCS[Si](C)(C)C | 1412.9 | Standard non polar | 33892256 | | 1,3-Propanedithiol,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)SCCCS | 1427.0 | Semi standard non polar | 33892256 | | 1,3-Propanedithiol,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)SCCCS | 1384.3 | Standard non polar | 33892256 | | 1,3-Propanedithiol,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)SCCCS[Si](C)(C)C(C)(C)C | 1855.0 | Semi standard non polar | 33892256 | | 1,3-Propanedithiol,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)SCCCS[Si](C)(C)C(C)(C)C | 1843.3 | Standard non polar | 33892256 |
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| GC-MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Experimental GC-MS | GC-MS Spectrum - 1,3-Propanedithiol EI-B (Non-derivatized) | splash10-0abd-9200000000-6a18983666e306b5d1d7 | 2017-09-12 | HMDB team, MONA, MassBank | View Spectrum | | Experimental GC-MS | GC-MS Spectrum - 1,3-Propanedithiol EI-B (Non-derivatized) | splash10-0abd-9200000000-6a18983666e306b5d1d7 | 2018-05-18 | HMDB team, MONA, MassBank | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 1,3-Propanedithiol GC-MS (Non-derivatized) - 70eV, Positive | splash10-0a6s-9200000000-e52211d6803d9ec24552 | 2017-09-01 | Wishart Lab | View Spectrum | | Predicted GC-MS | Predicted GC-MS Spectrum - 1,3-Propanedithiol GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS Spectra| Spectrum Type | Description | Splash Key | Deposition Date | Source | View |
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| Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 10V, Positive-QTOF | splash10-0a4i-2900000000-76d96c8e56e4f4106a94 | 2016-06-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 20V, Positive-QTOF | splash10-0a4i-5900000000-c48a799d17d2b0f678e8 | 2016-06-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 40V, Positive-QTOF | splash10-002f-9000000000-41d10c1fc8548da55ff1 | 2016-06-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 10V, Negative-QTOF | splash10-0a4i-3900000000-dc78cdd6283d5274b47b | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 20V, Negative-QTOF | splash10-0a4i-3900000000-a925516e41dac7002af6 | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 40V, Negative-QTOF | splash10-001i-9000000000-2107d7824cbfcb7dbebb | 2016-08-03 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 10V, Positive-QTOF | splash10-0a4i-3900000000-d3d0f815c6f657082b01 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 20V, Positive-QTOF | splash10-004i-9100000000-44b781c10730f1995f76 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 40V, Positive-QTOF | splash10-002g-9000000000-807f874af87e724e49c7 | 2021-09-21 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 10V, Negative-QTOF | splash10-0a4i-0900000000-9f97ff275589e44d8d21 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 20V, Negative-QTOF | splash10-0zfr-0900000000-de47768116b24e655008 | 2021-09-25 | Wishart Lab | View Spectrum | | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 1,3-Propanedithiol 40V, Negative-QTOF | splash10-053r-9500000000-a43203278cdac34643ba | 2021-09-25 | Wishart Lab | View Spectrum |
IR Spectra| Spectrum Type | Description | Deposition Date | Source | View |
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| Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-) | 2023-02-04 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+) | 2023-02-04 | FELIX lab | View Spectrum | | Predicted IR Spectrum | IR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+) | 2023-02-04 | FELIX lab | View Spectrum |
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