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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 18:39:38 UTC
Update Date2022-03-07 02:53:53 UTC
HMDB IDHMDB0033887
Secondary Accession Numbers
  • HMDB33887
Metabolite Identification
Common NameChondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside]
DescriptionChondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] belongs to the class of organic compounds known as stigmastanes and derivatives. These are sterol lipids with a structure based on the stigmastane skeleton, which consists of a cholestane moiety bearing an ethyl group at the carbon atom C24. Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563862476
Synonyms
ValueSource
Chondrillasterol 3-O-[b-D-glucopyranosyl-(1->2)-b-D-glucopyranosyl-(1->2)-b-D-glucopyranoside]HMDB
Chemical FormulaC47H78O16
Average Molecular Weight899.1126
Monoisotopic Molecular Weight898.528986448
IUPAC Name2-[(2-{[2-({14-[(3E)-5-ethyl-6-methylhept-3-en-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-9-en-5-yl}oxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
Traditional Name2-[(2-{[2-({14-[(3E)-5-ethyl-6-methylhept-3-en-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadec-9-en-5-yl}oxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl)oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
CAS Registry NumberNot Available
SMILES
CCC(\C=C\C(C)C1CCC2C3=CCC4CC(CCC4(C)C3CCC12C)OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1O)C(C)C
InChI Identifier
InChI=1S/C47H78O16/c1-7-24(22(2)3)9-8-23(4)28-12-13-29-27-11-10-25-18-26(14-16-46(25,5)30(27)15-17-47(28,29)6)58-44-41(38(55)35(52)32(20-49)60-44)63-45-42(39(56)36(53)33(21-50)61-45)62-43-40(57)37(54)34(51)31(19-48)59-43/h8-9,11,22-26,28-45,48-57H,7,10,12-21H2,1-6H3/b9-8+
InChI KeyGKJMLOMZBLJNRX-CMDGGOBGSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as stigmastanes and derivatives. These are sterol lipids with a structure based on the stigmastane skeleton, which consists of a cholestane moiety bearing an ethyl group at the carbon atom C24.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassStigmastanes and derivatives
Direct ParentStigmastanes and derivatives
Alternative ParentsNot Available
SubstituentsNot Available
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Not AvailableNot Available
Physical Properties
StateSolid
Experimental Molecular Properties
PropertyValueReference
Melting Point340 °CNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.11 g/LALOGPS
logP2.51ALOGPS
logP2.17ChemAxon
logS-3.9ALOGPS
pKa (Strongest Acidic)12ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count16ChemAxon
Hydrogen Donor Count10ChemAxon
Polar Surface Area257.68 ŲChemAxon
Rotatable Bond Count14ChemAxon
Refractivity228.12 m³·mol⁻¹ChemAxon
Polarizability97.74 ųChemAxon
Number of Rings7ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-325.03930932474
DeepCCS[M+Na]+299.07330932474
AllCCS[M+H]+290.232859911
AllCCS[M+H-H2O]+290.432859911
AllCCS[M+NH4]+290.032859911
AllCCS[M+Na]+290.032859911
AllCCS[M-H]-256.832859911
AllCCS[M+Na-2H]-263.232859911
AllCCS[M+HCOO]-270.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside]CCC(\C=C\C(C)C1CCC2C3=CCC4CC(CCC4(C)C3CCC12C)OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1O)C(C)C4261.7Standard polar33892256
Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside]CCC(\C=C\C(C)C1CCC2C3=CCC4CC(CCC4(C)C3CCC12C)OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1O)C(C)C5777.5Standard non polar33892256
Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside]CCC(\C=C\C(C)C1CCC2C3=CCC4CC(CCC4(C)C3CCC12C)OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1OC1OC(CO)C(O)C(O)C1O)C(C)C6515.9Semi standard non polar33892256
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 10V, Positive-QTOFsplash10-03fs-2306790670-426827d307e18e593f6e2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 20V, Positive-QTOFsplash10-03dj-4304950310-ffa012c5dad1ee3aea0e2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 40V, Positive-QTOFsplash10-03di-5709840130-61bc6c4a952a1fe7a6ce2016-08-01Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 10V, Negative-QTOFsplash10-08i4-2525962580-99519518b98b51044b1e2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 20V, Negative-QTOFsplash10-03di-1904740230-71df76382b69bacef5992016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 40V, Negative-QTOFsplash10-03fr-3912510000-7ac59541920466568cf02016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 10V, Positive-QTOFsplash10-0f6t-0000000290-ee1b4d1bb51dd104fe602021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 20V, Positive-QTOFsplash10-000t-6322000290-5c41eeae82bbdadd66002021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 40V, Positive-QTOFsplash10-01rb-9610000540-454889c9677818b8ac432021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 10V, Negative-QTOFsplash10-0002-0000000290-19fc2bbe75e3229bea2f2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 20V, Negative-QTOFsplash10-0595-4100110490-d9f8dda7eedcf78cdfa02021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Chondrillasterol 3-[glucosyl-(1->2)-glucosyl-(1->2)-glucoside] 40V, Negative-QTOFsplash10-054o-9200000520-6702f6b3cd84274d6b052021-09-25Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB012080
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751503
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.