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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2012-09-11 20:01:37 UTC
Update Date2022-03-07 02:54:21 UTC
HMDB IDHMDB0035083
Secondary Accession Numbers
  • HMDB35083
Metabolite Identification
Common Name(3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol
Description(3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol belongs to the class of organic compounds known as acyclic diterpenoids. These are diterpenoids (compounds made of four consecutive isoprene units) that do not contain a cycle. Based on a literature review a small amount of articles have been published on (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol.
Structure
Data?1563862662
SynonymsNot Available
Chemical FormulaC20H34O
Average Molecular Weight290.4834
Monoisotopic Molecular Weight290.26096571
IUPAC Name(6Z,10Z)-3,7,11,15-tetramethylhexadeca-1,6,10,14-tetraen-3-ol
Traditional Name(6Z,10Z)-3,7,11,15-tetramethylhexadeca-1,6,10,14-tetraen-3-ol
CAS Registry NumberNot Available
SMILES
CC(C)=CCC\C(C)=C/CC\C(C)=C/CCC(C)(O)C=C
InChI Identifier
InChI=1S/C20H34O/c1-7-20(6,21)16-10-15-19(5)14-9-13-18(4)12-8-11-17(2)3/h7,11,13,15,21H,1,8-10,12,14,16H2,2-6H3/b18-13-,19-15-
InChI KeyIQDXAJNQKSIPGB-ONPJFLAQSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as acyclic diterpenoids. These are diterpenoids (compounds made of four consecutive isoprene units) that do not contain a cycle.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassPrenol lipids
Sub ClassDiterpenoids
Direct ParentAcyclic diterpenoids
Alternative Parents
Substituents
  • Acyclic diterpenoid
  • Tertiary alcohol
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Process
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0041 g/LALOGPS
logP5.92ALOGPS
logP5.97ChemAxon
logS-4.8ALOGPS
pKa (Strongest Acidic)18.46ChemAxon
pKa (Strongest Basic)-1.3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count1ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area20.23 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity97.81 m³·mol⁻¹ChemAxon
Polarizability36.61 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleYesChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+173.40331661259
DarkChem[M-H]-171.35731661259
DeepCCS[M+H]+181.17130932474
DeepCCS[M-H]-178.81330932474
DeepCCS[M-2H]-211.69930932474
DeepCCS[M+Na]+187.26430932474
AllCCS[M+H]+182.632859911
AllCCS[M+H-H2O]+179.632859911
AllCCS[M+NH4]+185.432859911
AllCCS[M+Na]+186.232859911
AllCCS[M-H]-178.332859911
AllCCS[M+Na-2H]-179.332859911
AllCCS[M+HCOO]-180.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
(3S,6E,10E)-1,6,10,14-Phytatetraen-3-olCC(C)=CCC\C(C)=C/CC\C(C)=C/CCC(C)(O)C=C2547.9Standard polar33892256
(3S,6E,10E)-1,6,10,14-Phytatetraen-3-olCC(C)=CCC\C(C)=C/CC\C(C)=C/CCC(C)(O)C=C2024.3Standard non polar33892256
(3S,6E,10E)-1,6,10,14-Phytatetraen-3-olCC(C)=CCC\C(C)=C/CC\C(C)=C/CCC(C)(O)C=C2046.1Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
(3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol,1TMS,isomer #1C=CC(C)(CC/C=C(/C)CC/C=C(/C)CCC=C(C)C)O[Si](C)(C)C2126.0Semi standard non polar33892256
(3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol,1TBDMS,isomer #1C=CC(C)(CC/C=C(/C)CC/C=C(/C)CCC=C(C)C)O[Si](C)(C)C(C)(C)C2366.8Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol GC-MS (Non-derivatized) - 70eV, Positivesplash10-00di-9380000000-c77794ed3e09d6c197c32017-09-01Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol GC-MS (1 TMS) - 70eV, Positivesplash10-002k-9566000000-3de66bd985ebecc3bb182017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 10V, Positive-QTOFsplash10-00dl-0290000000-51816f182163901f617d2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 20V, Positive-QTOFsplash10-06di-6970000000-548912138f409387b8ab2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 40V, Positive-QTOFsplash10-0gi0-9610000000-4dd7fe53f5cd9329bd2f2016-06-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 10V, Negative-QTOFsplash10-000i-0090000000-89190f55ce9d4f41e9492016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 20V, Negative-QTOFsplash10-000i-0090000000-9962228bd3b5f029598d2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 40V, Negative-QTOFsplash10-0l6r-6490000000-a81eda2079af1edf1abd2016-08-03Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 10V, Negative-QTOFsplash10-000i-0090000000-9c39f4191949fb3c8e462021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 20V, Negative-QTOFsplash10-000i-2090000000-50e8fcdddfccc3277d172021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 40V, Negative-QTOFsplash10-006t-2930000000-867aa4c73f31191d7ee52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 10V, Positive-QTOFsplash10-00dl-3890000000-40b6aa87e7246e4ced3d2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 20V, Positive-QTOFsplash10-059t-4910000000-92ad6fc03cba04e8a5812021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - (3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol 40V, Positive-QTOFsplash10-0a5c-9700000000-a999699dc79c743a0f0c2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Extracellular
  • Membrane
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB013708
KNApSAcK IDNot Available
Chemspider ID28424164
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound131751662
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. (). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.