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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2012-09-11 20:22:40 UTC

Update Date

2022-03-07 02:54:29 UTC

HMDB ID

HMDB0035398

Secondary Accession Numbers

HMDB35398

Metabolite Identification

Common Name

Cohibin D

Description

Cohibin D belongs to the class of organic compounds known as annonaceous acetogenins. These are waxy derivatives of fatty acids (usually C32 or C34), containing a terminal carboxylic acid combined with a 2-propanol unit at the C-2 position to form a methyl- substituted alpha,beta-unsaturated-gamma-lactone. One of their interesting structural features is a single, adjacent, or nonadjacent tetrahydrofuran (THF) or tetrahydropyran (THP) system with one or two flanking hydroxyl group(s) at the center of a long hydrocarbon chain. Based on a literature review a small amount of articles have been published on Cohibin D.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv0541 05061308252D          

 41 41  0  0  0  0            999 V2000
   15.7654   -9.0026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5081    0.7061    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0509   -8.5901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0509   -7.7651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3365   -7.3526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3365   -6.5276    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6220   -6.1151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6220   -5.2901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9075   -4.8776    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9075   -4.0526    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1930   -3.6401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1930   -2.8151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4786   -2.4026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4786   -1.5776    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7641   -1.1651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9049    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1904    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7641   -0.3401    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6194    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4760    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0496    0.0724    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3339    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7615    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0496    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0483    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0470    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3352    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7628    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6674    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6207    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4773    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1356    1.2330    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6876    0.6199    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3819    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9062    1.3099    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1917    0.8974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4681    0.0769    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9062    2.1349    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1917    0.0724    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8551   -0.4751    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2751   -0.0946    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  1  1  0  0  0  0
  4  3  1  0  0  0  0
  5  4  1  0  0  0  0
  6  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  7  1  0  0  0  0
  9  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11 10  1  0  0  0  0
 12 11  1  0  0  0  0
 13 12  1  0  0  0  0
 14 13  1  0  0  0  0
 15 14  1  0  0  0  0
 17 16  1  0  0  0  0
 18 15  1  0  0  0  0
 19 16  1  0  0  0  0
 20 17  1  0  0  0  0
 21 18  1  0  0  0  0
 22 19  1  0  0  0  0
 23 20  1  0  0  0  0
 24 21  2  0  0  0  0
 25 22  1  0  0  0  0
 26 23  1  0  0  0  0
 27 24  1  0  0  0  0
 28 25  1  0  0  0  0
 29 26  1  0  0  0  0
 30 27  1  0  0  0  0
 31 28  1  0  0  0  0
 33  2  1  0  0  0  0
 33 32  1  0  0  0  0
 34 29  1  0  0  0  0
 34 32  2  0  0  0  0
 35 30  1  0  0  0  0
 36 31  1  0  0  0  0
 36 35  1  0  0  0  0
 37 34  1  0  0  0  0
 38 35  1  0  0  0  0
 39 36  1  0  0  0  0
 40 37  2  0  0  0  0
 41 33  1  0  0  0  0
 41 37  1  0  0  0  0
M  END

HMDB0035398
     RDKit          3D
Cohibin D
109109  0  0  0  0  0  0  0  0999 V2000
  -14.6716    1.5789    1.8710 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2246    0.9334    0.6030 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2628   -0.2428    0.8439 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0484    0.1924    1.5551 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0390   -0.8021    1.8934 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2368   -1.5400    0.9064 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8716   -2.3969   -0.1018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9868   -3.1580   -1.0403 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2172   -2.4560   -2.0684 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2668   -1.3889   -1.6653 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5295   -0.9467   -2.9662 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5590    0.1295   -2.6131 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4948   -0.2946   -1.6243 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6578   -1.4168   -2.1479 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5858   -1.8562   -1.1806 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7187   -0.6957   -0.8903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4287   -0.6125   -1.1498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6828    0.6135   -0.8027 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4665    0.3679    0.1491 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1173    1.6723    0.4496 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5744    2.2438   -0.7358 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4106    1.4609    1.2867 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9480    0.8515    2.4629 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9228    2.8122    1.6923 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1364    2.8945    2.4953 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4468    2.4537    2.0517 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7576    1.0891    1.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2458    0.9127    1.3089 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5761    1.8217    0.1569 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0087    1.6912   -0.3199 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9473    2.0220    0.7904 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4018    1.9191    0.3625 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7648    0.5349   -0.1100 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2250    0.5419   -0.5092 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6415   -0.8077   -0.9947 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5813   -1.5319   -0.4598 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7311   -2.8018   -1.1861 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5326   -4.0228   -0.3110 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7708   -2.7577   -2.2136 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.1083   -1.5621   -2.1121 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1806   -1.1526   -2.8535 O   0  0  0  0  0  0  0  0  0  0  0  0
  -15.7380    1.8783    1.7541 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.1227    2.5459    2.0721 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.6235    0.9064    2.7455 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8078    1.6710   -0.0819 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1135    0.4777    0.1062 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.1725   -0.7119   -0.1303 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8268   -0.9866    1.4816 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.3581    0.6879    2.5439 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.5818    1.1119    1.0298 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2634   -0.3746    2.6412 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -9.3694   -0.9218    0.5814 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6483   -2.3166    1.5825 H   0  0  0  0  0  0  0  0  0  0  0  0
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  -11.6224   -3.1011    0.2831 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2252   -3.7422   -0.4054 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5785   -3.9819   -1.5526 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.6672   -3.1721   -2.7562 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.0034   -2.0202   -2.7973 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5802   -1.5979   -0.8570 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8649   -0.4547   -1.3658 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3237   -0.5081   -3.6018 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -6.1218    0.5469   -3.5286 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1365    0.9679   -2.1429 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8316    0.6122   -1.5131 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8976   -0.4802   -0.6156 H   0  0  0  0  0  0  0  0  0  0  0  0
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    1.0935    1.2189    2.7592 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0862    3.2278    2.3535 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8840    3.5388    0.8331 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8999    2.3594    3.4845 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1897    3.9761    2.8762 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7184    3.1249    1.1584 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.2395    2.7853    2.8002 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.2472    0.6484    0.7917 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.5923    0.3695    2.5224 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.4527   -0.1519    1.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8390    1.2037    2.2245 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8307    1.7455   -0.6477 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5212    2.8932    0.5298 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1819    0.7473   -0.8340 H   0  0  0  0  0  0  0  0  0  0  0  0
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    9.7616    1.3286    1.6474 H   0  0  0  0  0  0  0  0  0  0  0  0
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   14.7298   -3.7493    0.7293 H   0  0  0  0  0  0  0  0  0  0  0  0
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 36105  1  0
 37106  1  0
 38107  1  0
 38108  1  0
 38109  1  0
M  END


  Mrv0541 05061308252D          

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 10  9  1  0  0  0  0
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M  END
> <DATABASE_ID>
HMDB0035398

> <DATABASE_NAME>
hmdb

> <SMILES>
CCCCCCCCCCCCCCC\C=C\CCC(O)C(O)CCCCCCCCCCCC1=CC(C)OC1=O

> <INCHI_IDENTIFIER>
InChI=1S/C37H68O4/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-18-21-24-27-30-35(38)36(39)31-28-25-22-19-16-17-20-23-26-29-34-32-33(2)41-37(34)40/h21,24,32-33,35-36,38-39H,3-20,22-23,25-31H2,1-2H3/b24-21+

> <INCHI_KEY>
JGXOAQHUFINOAQ-DARPEHSRSA-N

> <FORMULA>
C37H68O4

> <MOLECULAR_WEIGHT>
576.9334

> <EXACT_MASS>
576.511760664

> <JCHEM_ACCEPTOR_COUNT>
3

> <JCHEM_AVERAGE_POLARIZABILITY>
77.7972529951336

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
3-[(16E)-12,13-dihydroxydotriacont-16-en-1-yl]-5-methyl-2,5-dihydrofuran-2-one

> <ALOGPS_LOGP>
10.08

> <JCHEM_LOGP>
12.306825926999998

> <ALOGPS_LOGS>
-7.12

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.939105258076093

> <JCHEM_PKA_STRONGEST_ACIDIC>
13.878303490097814

> <JCHEM_PKA_STRONGEST_BASIC>
-3.1442581910954512

> <JCHEM_POLAR_SURFACE_AREA>
66.76

> <JCHEM_REFRACTIVITY>
176.80190000000002

> <JCHEM_ROTATABLE_BOND_COUNT>
30

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
4.39e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
3-[(16E)-12,13-dihydroxydotriacont-16-en-1-yl]-5-methyl-5H-furan-2-one

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0035398
     RDKit          3D
Cohibin D
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  5  6  1  0
  6  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  2  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 20 22  1  0
 22 23  1  0
 22 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 35 36  2  0
 36 37  1  0
 37 38  1  0
 37 39  1  0
 39 40  1  0
 40 41  2  0
 40 35  1  0
  1 42  1  0
  1 43  1  0
  1 44  1  0
  2 45  1  0
  2 46  1  0
  3 47  1  0
  3 48  1  0
  4 49  1  0
  4 50  1  0
  5 51  1  0
  5 52  1  0
  6 53  1  0
  6 54  1  0
  7 55  1  0
  7 56  1  0
  8 57  1  0
  8 58  1  0
  9 59  1  0
  9 60  1  0
 10 61  1  0
 10 62  1  0
 11 63  1  0
 11 64  1  0
 12 65  1  0
 12 66  1  0
 13 67  1  0
 13 68  1  0
 14 69  1  0
 14 70  1  0
 15 71  1  0
 15 72  1  0
 16 73  1  0
 17 74  1  0
 18 75  1  0
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 21 80  1  0
 22 81  1  0
 23 82  1  0
 24 83  1  0
 24 84  1  0
 25 85  1  0
 25 86  1  0
 26 87  1  0
 26 88  1  0
 27 89  1  0
 27 90  1  0
 28 91  1  0
 28 92  1  0
 29 93  1  0
 29 94  1  0
 30 95  1  0
 30 96  1  0
 31 97  1  0
 31 98  1  0
 32 99  1  0
 32100  1  0
 33101  1  0
 33102  1  0
 34103  1  0
 34104  1  0
 36105  1  0
 37106  1  0
 38107  1  0
 38108  1  0
 38109  1  0
M  END

HEADER    PROTEIN                                 06-MAY-13   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   06-MAY-13         0                                  
HETATM    1  C   UNK     0      29.429 -16.805   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -6.548   1.318   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      28.095 -16.035   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      28.095 -14.495   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      26.761 -13.725   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      26.761 -12.185   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      25.428 -11.415   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      25.428  -9.875   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0      24.094  -9.105   0.000  0.00  0.00           C+0
HETATM   10  C   UNK     0      24.094  -7.565   0.000  0.00  0.00           C+0
HETATM   11  C   UNK     0      22.760  -6.795   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      22.760  -5.255   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      21.427  -4.485   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0      21.427  -2.945   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      20.093  -2.175   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       5.422   1.675   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0       4.089   2.445   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      20.093  -0.635   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       6.756   2.445   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       2.755   1.675   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      18.759   0.135   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0       8.090   1.675   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0       1.421   2.445   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      18.759   1.675   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       9.423   2.445   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       0.088   1.675   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      17.426   2.445   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      10.757   1.675   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      -1.246   2.445   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      16.092   1.675   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0      12.091   2.445   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0      -3.986   2.302   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0      -5.017   1.157   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0      -2.580   1.675   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0      14.758   2.445   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      13.425   1.675   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      -2.740   0.144   0.000  0.00  0.00           C+0
HETATM   38  O   UNK     0      14.758   3.985   0.000  0.00  0.00           O+0
HETATM   39  O   UNK     0      13.425   0.135   0.000  0.00  0.00           O+0
HETATM   40  O   UNK     0      -1.596  -0.887   0.000  0.00  0.00           O+0
HETATM   41  O   UNK     0      -4.247  -0.177   0.000  0.00  0.00           O+0
CONECT    1    3                                                            
CONECT    2   33                                                            
CONECT    3    1    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8                                                       
CONECT    8    7    9                                                       
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15                                                       
CONECT   15   14   18                                                       
CONECT   16   17   19                                                       
CONECT   17   16   20                                                       
CONECT   18   15   21                                                       
CONECT   19   16   22                                                       
CONECT   20   17   23                                                       
CONECT   21   18   24                                                       
CONECT   22   19   25                                                       
CONECT   23   20   26                                                       
CONECT   24   21   27                                                       
CONECT   25   22   28                                                       
CONECT   26   23   29                                                       
CONECT   27   24   30                                                       
CONECT   28   25   31                                                       
CONECT   29   26   34                                                       
CONECT   30   27   35                                                       
CONECT   31   28   36                                                       
CONECT   32   33   34                                                       
CONECT   33    2   32   41                                                  
CONECT   34   29   32   37                                                  
CONECT   35   30   36   38                                                  
CONECT   36   31   35   39                                                  
CONECT   37   34   40   41                                                  
CONECT   38   35                                                            
CONECT   39   36                                                            
CONECT   40   37                                                            
CONECT   41   33   37                                                       
MASTER        0    0    0    0    0    0    0    0   41    0   82    0
END

COMPND    HMDB0035398
HETATM    1  C1  UNL     1     -14.672   1.579   1.871  1.00  0.00           C  
HETATM    2  C2  UNL     1     -14.225   0.933   0.603  1.00  0.00           C  
HETATM    3  C3  UNL     1     -13.263  -0.243   0.844  1.00  0.00           C  
HETATM    4  C4  UNL     1     -12.048   0.192   1.555  1.00  0.00           C  
HETATM    5  C5  UNL     1     -11.039  -0.802   1.893  1.00  0.00           C  
HETATM    6  C6  UNL     1     -10.237  -1.540   0.906  1.00  0.00           C  
HETATM    7  C7  UNL     1     -10.872  -2.397  -0.102  1.00  0.00           C  
HETATM    8  C8  UNL     1      -9.987  -3.158  -1.040  1.00  0.00           C  
HETATM    9  C9  UNL     1      -9.217  -2.456  -2.068  1.00  0.00           C  
HETATM   10  C10 UNL     1      -8.267  -1.389  -1.665  1.00  0.00           C  
HETATM   11  C11 UNL     1      -7.530  -0.947  -2.966  1.00  0.00           C  
HETATM   12  C12 UNL     1      -6.559   0.130  -2.613  1.00  0.00           C  
HETATM   13  C13 UNL     1      -5.495  -0.295  -1.624  1.00  0.00           C  
HETATM   14  C14 UNL     1      -4.658  -1.417  -2.148  1.00  0.00           C  
HETATM   15  C15 UNL     1      -3.586  -1.856  -1.181  1.00  0.00           C  
HETATM   16  C16 UNL     1      -2.719  -0.696  -0.890  1.00  0.00           C  
HETATM   17  C17 UNL     1      -1.429  -0.613  -1.150  1.00  0.00           C  
HETATM   18  C18 UNL     1      -0.683   0.613  -0.803  1.00  0.00           C  
HETATM   19  C19 UNL     1       0.467   0.368   0.149  1.00  0.00           C  
HETATM   20  C20 UNL     1       1.117   1.672   0.450  1.00  0.00           C  
HETATM   21  O1  UNL     1       1.574   2.244  -0.736  1.00  0.00           O  
HETATM   22  C21 UNL     1       2.411   1.461   1.287  1.00  0.00           C  
HETATM   23  O2  UNL     1       1.948   0.851   2.463  1.00  0.00           O  
HETATM   24  C22 UNL     1       2.923   2.812   1.692  1.00  0.00           C  
HETATM   25  C23 UNL     1       4.136   2.894   2.495  1.00  0.00           C  
HETATM   26  C24 UNL     1       5.447   2.454   2.052  1.00  0.00           C  
HETATM   27  C25 UNL     1       5.758   1.089   1.669  1.00  0.00           C  
HETATM   28  C26 UNL     1       7.246   0.913   1.309  1.00  0.00           C  
HETATM   29  C27 UNL     1       7.576   1.822   0.157  1.00  0.00           C  
HETATM   30  C28 UNL     1       9.009   1.691  -0.320  1.00  0.00           C  
HETATM   31  C29 UNL     1       9.947   2.022   0.790  1.00  0.00           C  
HETATM   32  C30 UNL     1      11.402   1.919   0.363  1.00  0.00           C  
HETATM   33  C31 UNL     1      11.765   0.535  -0.110  1.00  0.00           C  
HETATM   34  C32 UNL     1      13.225   0.542  -0.509  1.00  0.00           C  
HETATM   35  C33 UNL     1      13.641  -0.808  -0.995  1.00  0.00           C  
HETATM   36  C34 UNL     1      14.581  -1.532  -0.460  1.00  0.00           C  
HETATM   37  C35 UNL     1      14.731  -2.802  -1.186  1.00  0.00           C  
HETATM   38  C36 UNL     1      14.533  -4.023  -0.311  1.00  0.00           C  
HETATM   39  O3  UNL     1      13.771  -2.758  -2.214  1.00  0.00           O  
HETATM   40  C37 UNL     1      13.108  -1.562  -2.112  1.00  0.00           C  
HETATM   41  O4  UNL     1      12.181  -1.153  -2.853  1.00  0.00           O  
HETATM   42  H1  UNL     1     -15.738   1.878   1.754  1.00  0.00           H  
HETATM   43  H2  UNL     1     -14.123   2.546   2.072  1.00  0.00           H  
HETATM   44  H3  UNL     1     -14.623   0.906   2.745  1.00  0.00           H  
HETATM   45  H4  UNL     1     -13.808   1.671  -0.082  1.00  0.00           H  
HETATM   46  H5  UNL     1     -15.114   0.478   0.106  1.00  0.00           H  
HETATM   47  H6  UNL     1     -13.173  -0.712  -0.130  1.00  0.00           H  
HETATM   48  H7  UNL     1     -13.827  -0.987   1.482  1.00  0.00           H  
HETATM   49  H8  UNL     1     -12.358   0.688   2.544  1.00  0.00           H  
HETATM   50  H9  UNL     1     -11.582   1.112   1.030  1.00  0.00           H  
HETATM   51  H10 UNL     1     -10.263  -0.375   2.641  1.00  0.00           H  
HETATM   52  H11 UNL     1     -11.527  -1.585   2.585  1.00  0.00           H  
HETATM   53  H12 UNL     1      -9.369  -0.922   0.581  1.00  0.00           H  
HETATM   54  H13 UNL     1      -9.648  -2.317   1.582  1.00  0.00           H  
HETATM   55  H14 UNL     1     -11.436  -1.682  -0.814  1.00  0.00           H  
HETATM   56  H15 UNL     1     -11.622  -3.101   0.283  1.00  0.00           H  
HETATM   57  H16 UNL     1      -9.225  -3.742  -0.405  1.00  0.00           H  
HETATM   58  H17 UNL     1     -10.579  -3.982  -1.553  1.00  0.00           H  
HETATM   59  H18 UNL     1      -8.667  -3.172  -2.756  1.00  0.00           H  
HETATM   60  H19 UNL     1     -10.003  -2.020  -2.797  1.00  0.00           H  
HETATM   61  H20 UNL     1      -7.580  -1.598  -0.857  1.00  0.00           H  
HETATM   62  H21 UNL     1      -8.865  -0.455  -1.366  1.00  0.00           H  
HETATM   63  H22 UNL     1      -8.324  -0.508  -3.602  1.00  0.00           H  
HETATM   64  H23 UNL     1      -7.111  -1.808  -3.485  1.00  0.00           H  
HETATM   65  H24 UNL     1      -6.122   0.547  -3.529  1.00  0.00           H  
HETATM   66  H25 UNL     1      -7.137   0.968  -2.143  1.00  0.00           H  
HETATM   67  H26 UNL     1      -4.832   0.612  -1.513  1.00  0.00           H  
HETATM   68  H27 UNL     1      -5.898  -0.480  -0.616  1.00  0.00           H  
HETATM   69  H28 UNL     1      -4.145  -1.174  -3.093  1.00  0.00           H  
HETATM   70  H29 UNL     1      -5.348  -2.299  -2.298  1.00  0.00           H  
HETATM   71  H30 UNL     1      -4.074  -2.264  -0.270  1.00  0.00           H  
HETATM   72  H31 UNL     1      -2.995  -2.682  -1.665  1.00  0.00           H  
HETATM   73  H32 UNL     1      -3.193   0.163  -0.417  1.00  0.00           H  
HETATM   74  H33 UNL     1      -0.939  -1.452  -1.616  1.00  0.00           H  
HETATM   75  H34 UNL     1      -0.279   1.103  -1.729  1.00  0.00           H  
HETATM   76  H35 UNL     1      -1.331   1.384  -0.327  1.00  0.00           H  
HETATM   77  H36 UNL     1       0.037  -0.069   1.086  1.00  0.00           H  
HETATM   78  H37 UNL     1       1.191  -0.298  -0.347  1.00  0.00           H  
HETATM   79  H38 UNL     1       0.453   2.404   0.941  1.00  0.00           H  
HETATM   80  H39 UNL     1       1.767   1.489  -1.359  1.00  0.00           H  
HETATM   81  H40 UNL     1       3.032   0.851   0.660  1.00  0.00           H  
HETATM   82  H41 UNL     1       1.093   1.219   2.759  1.00  0.00           H  
HETATM   83  H42 UNL     1       2.086   3.228   2.353  1.00  0.00           H  
HETATM   84  H43 UNL     1       2.884   3.539   0.833  1.00  0.00           H  
HETATM   85  H44 UNL     1       3.900   2.359   3.484  1.00  0.00           H  
HETATM   86  H45 UNL     1       4.190   3.976   2.876  1.00  0.00           H  
HETATM   87  H46 UNL     1       5.718   3.125   1.158  1.00  0.00           H  
HETATM   88  H47 UNL     1       6.239   2.785   2.800  1.00  0.00           H  
HETATM   89  H48 UNL     1       5.247   0.648   0.792  1.00  0.00           H  
HETATM   90  H49 UNL     1       5.592   0.370   2.522  1.00  0.00           H  
HETATM   91  H50 UNL     1       7.453  -0.152   1.077  1.00  0.00           H  
HETATM   92  H51 UNL     1       7.839   1.204   2.224  1.00  0.00           H  
HETATM   93  H52 UNL     1       6.831   1.746  -0.648  1.00  0.00           H  
HETATM   94  H53 UNL     1       7.521   2.893   0.530  1.00  0.00           H  
HETATM   95  H54 UNL     1       9.182   0.747  -0.834  1.00  0.00           H  
HETATM   96  H55 UNL     1       9.130   2.501  -1.097  1.00  0.00           H  
HETATM   97  H56 UNL     1       9.775   3.072   1.098  1.00  0.00           H  
HETATM   98  H57 UNL     1       9.762   1.329   1.647  1.00  0.00           H  
HETATM   99  H58 UNL     1      12.009   2.150   1.270  1.00  0.00           H  
HETATM  100  H59 UNL     1      11.564   2.660  -0.443  1.00  0.00           H  
HETATM  101  H60 UNL     1      11.612  -0.158   0.737  1.00  0.00           H  
HETATM  102  H61 UNL     1      11.146   0.294  -0.995  1.00  0.00           H  
HETATM  103  H62 UNL     1      13.833   0.824   0.368  1.00  0.00           H  
HETATM  104  H63 UNL     1      13.371   1.319  -1.282  1.00  0.00           H  
HETATM  105  H64 UNL     1      15.213  -1.289   0.412  1.00  0.00           H  
HETATM  106  H65 UNL     1      15.760  -2.847  -1.610  1.00  0.00           H  
HETATM  107  H66 UNL     1      15.208  -4.819  -0.661  1.00  0.00           H  
HETATM  108  H67 UNL     1      13.475  -4.384  -0.391  1.00  0.00           H  
HETATM  109  H68 UNL     1      14.730  -3.749   0.729  1.00  0.00           H  
CONECT    1    2   42   43   44
CONECT    2    3   45   46
CONECT    3    4   47   48
CONECT    4    5   49   50
CONECT    5    6   51   52
CONECT    6    7   53   54
CONECT    7    8   55   56
CONECT    8    9   57   58
CONECT    9   10   59   60
CONECT   10   11   61   62
CONECT   11   12   63   64
CONECT   12   13   65   66
CONECT   13   14   67   68
CONECT   14   15   69   70
CONECT   15   16   71   72
CONECT   16   17   17   73
CONECT   17   18   74
CONECT   18   19   75   76
CONECT   19   20   77   78
CONECT   20   21   22   79
CONECT   21   80
CONECT   22   23   24   81
CONECT   23   82
CONECT   24   25   83   84
CONECT   25   26   85   86
CONECT   26   27   87   88
CONECT   27   28   89   90
CONECT   28   29   91   92
CONECT   29   30   93   94
CONECT   30   31   95   96
CONECT   31   32   97   98
CONECT   32   33   99  100
CONECT   33   34  101  102
CONECT   34   35  103  104
CONECT   35   36   36   40
CONECT   36   37  105
CONECT   37   38   39  106
CONECT   38  107  108  109
CONECT   39   40
CONECT   40   41   41
END

HMDB0035398
     RDKit          3D
Cohibin D
109109  0  0  0  0  0  0  0  0999 V2000
  -14.6716    1.5789    1.8710 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.2246    0.9334    0.6030 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2628   -0.2428    0.8439 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0484    0.1924    1.5551 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0390   -0.8021    1.8934 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.2368   -1.5400    0.9064 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.8716   -2.3969   -0.1018 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9868   -3.1580   -1.0403 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.2172   -2.4560   -2.0684 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2668   -1.3889   -1.6653 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5295   -0.9467   -2.9662 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5590    0.1295   -2.6131 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.4948   -0.2946   -1.6243 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6578   -1.4168   -2.1479 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5858   -1.8562   -1.1806 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7187   -0.6957   -0.8903 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4287   -0.6125   -1.1498 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6828    0.6135   -0.8027 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4665    0.3679    0.1491 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.1173    1.6723    0.4496 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5744    2.2438   -0.7358 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.4106    1.4609    1.2867 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9480    0.8515    2.4629 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.9228    2.8122    1.6923 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1364    2.8945    2.4953 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4468    2.4537    2.0517 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7576    1.0891    1.6687 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2458    0.9127    1.3089 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5761    1.8217    0.1569 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0087    1.6912   -0.3199 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9473    2.0220    0.7904 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4018    1.9191    0.3625 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7648    0.5349   -0.1100 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2250    0.5419   -0.5092 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6415   -0.8077   -0.9947 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5813   -1.5319   -0.4598 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7311   -2.8018   -1.1861 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.5326   -4.0228   -0.3110 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7708   -2.7577   -2.2136 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.1083   -1.5621   -2.1121 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1806   -1.1526   -2.8535 O   0  0  0  0  0  0  0  0  0  0  0  0
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    7.4527   -0.1519    1.0771 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8390    1.2037    2.2245 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.8307    1.7455   -0.6477 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.5212    2.8932    0.5298 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1819    0.7473   -0.8340 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.1302    2.5011   -1.0974 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.7752    3.0724    1.0977 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.7616    1.3286    1.6474 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.0089    2.1499    1.2703 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.5643    2.6602   -0.4434 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.6119   -0.1578    0.7367 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.1460    0.2936   -0.9950 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.8334    0.8240    0.3685 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.3707    1.3190   -1.2823 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.2127   -1.2894    0.4116 H   0  0  0  0  0  0  0  0  0  0  0  0
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   14.7298   -3.7493    0.7293 H   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View Stereo Labels

Synonyms

Not Available

Chemical Formula

C₃₇H₆₈O₄

Average Molecular Weight

576.9334

Monoisotopic Molecular Weight

576.511760664

IUPAC Name

3-[(16E)-12,13-dihydroxydotriacont-16-en-1-yl]-5-methyl-2,5-dihydrofuran-2-one

Traditional Name

3-[(16E)-12,13-dihydroxydotriacont-16-en-1-yl]-5-methyl-5H-furan-2-one

CAS Registry Number

Not Available

SMILES

CCCCCCCCCCCCCCC\C=C\CCC(O)C(O)CCCCCCCCCCCC1=CC(C)OC1=O

InChI Identifier

InChI=1S/C37H68O4/c1-3-4-5-6-7-8-9-10-11-12-13-14-15-18-21-24-27-30-35(38)36(39)31-28-25-22-19-16-17-20-23-26-29-34-32-33(2)41-37(34)40/h21,24,32-33,35-36,38-39H,3-20,22-23,25-31H2,1-2H3/b24-21+

InChI Key

JGXOAQHUFINOAQ-DARPEHSRSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as annonaceous acetogenins. These are waxy derivatives of fatty acids (usually C32 or C34), containing a terminal carboxylic acid combined with a 2-propanol unit at the C-2 position to form a methyl- substituted alpha,beta-unsaturated-gamma-lactone. One of their interesting structural features is a single, adjacent, or nonadjacent tetrahydrofuran (THF) or tetrahydropyran (THP) system with one or two flanking hydroxyl group(s) at the center of a long hydrocarbon chain.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty alcohols

Direct Parent

Annonaceous acetogenins

Alternative Parents

Substituents

Annonaceae acetogenin skeleton
Long chain fatty alcohol
2-furanone
Dihydrofuran
Enoate ester
Alpha,beta-unsaturated carboxylic ester
Secondary alcohol
Lactone
1,2-diol
Carboxylic acid ester
Monocarboxylic acid or derivatives
Carboxylic acid derivative
Organoheterocyclic compound
Oxacycle
Alcohol
Organooxygen compound
Hydrocarbon derivative
Carbonyl group
Organic oxide
Organic oxygen compound
Aliphatic heteromonocyclic compound

Molecular Framework

Aliphatic heteromonocyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cellular substructure

Excreta

Biofluid or Excreta

Urine (HMDB: HMDB0035398)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0035398)

Source

Endogenous

Endogenous (HMDB: HMDB0035398)

Plant

Plant (HMDB: HMDB0035398)

Animal

Animal (HMDB: HMDB0035398)

Exogenous

Food

Food (HMDB: HMDB0035398)

Fruit

Fruits (FooDB: FOOD00871)

Exogenous (HMDB: HMDB0035398)

Process

Naturally occurring process

Biological process

Chemical reaction

Lipid Peroxidation (HMDB: HMDB0035398)

Biochemical pathway

Metabolic pathway

Fatty Acid Metabolism (HMDB: HMDB0035398)

Lipid metabolism pathway (HMDB: HMDB0035398)

Cellular process

Cell signaling (HMDB: HMDB0035398)

Biochemical process

Lipid transport (HMDB: HMDB0035398)

Role

Biological role

Energy source (HMDB: HMDB0035398)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0035398)

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	4.4e-05 g/L	ALOGPS
logP	10.08	ALOGPS
logP	12.31	ChemAxon
logS	-7.1	ALOGPS
pKa (Strongest Acidic)	13.88	ChemAxon
pKa (Strongest Basic)	-3.1	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	3	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	66.76 Å²	ChemAxon
Rotatable Bond Count	30	ChemAxon
Refractivity	176.8 m³·mol⁻¹	ChemAxon
Polarizability	77.8 Å³	ChemAxon
Number of Rings	1	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	250.836	31661259
DarkChem	[M-H]-	251.048	31661259
DeepCCS	[M+H]+	254.058	30932474
DeepCCS	[M-H]-	251.263	30932474
DeepCCS	[M-2H]-	286.116	30932474
DeepCCS	[M+Na]+	261.76	30932474
AllCCS	[M+H]+	260.3	32859911
AllCCS	[M+H-H2O]+	259.1	32859911
AllCCS	[M+NH4]+	261.3	32859911
AllCCS	[M+Na]+	261.6	32859911
AllCCS	[M-H]-	244.4	32859911
AllCCS	[M+Na-2H]-	249.9	32859911
AllCCS	[M+HCOO]-	256.1	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Measured using a Waters Acquity ultraperformance liquid chromatography (UPLC) ethylene-bridged hybrid (BEH) C18 column (100 mm × 2.1 mm; 1.7 μmparticle diameter). Predicted by Afia on May 17, 2022. Predicted by Afia on May 17, 2022.	9.14 minutes	32390414
Predicted by Siyang on May 30, 2022	37.3054 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	0.67 minutes	32390414
AjsUoB = Accucore 150 Amide HILIC with 10mM Ammonium Formate, 0.1% Formic Acid	62.5 seconds	40023050
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	5398.0 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	822.8 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	380.3 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	359.9 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	966.4 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	1683.2 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	1450.5 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	143.9 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	3597.5 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	1032.7 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	2991.1 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	1294.5 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	775.7 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	751.7 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	821.3 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	9.8 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
Cohibin D	CCCCCCCCCCCCCCC\C=C\CCC(O)C(O)CCCCCCCCCCCC1=CC(C)OC1=O	4584.8	Standard polar	33892256
Cohibin D	CCCCCCCCCCCCCCC\C=C\CCC(O)C(O)CCCCCCCCCCCC1=CC(C)OC1=O	4075.8	Standard non polar	33892256
Cohibin D	CCCCCCCCCCCCCCC\C=C\CCC(O)C(O)CCCCCCCCCCCC1=CC(C)OC1=O	4441.2	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
Cohibin D,1TMS,isomer #1	CCCCCCCCCCCCCCC/C=C/CCC(O[Si](C)(C)C)C(O)CCCCCCCCCCCC1=CC(C)OC1=O	4400.7	Semi standard non polar	33892256
Cohibin D,1TMS,isomer #2	CCCCCCCCCCCCCCC/C=C/CCC(O)C(CCCCCCCCCCCC1=CC(C)OC1=O)O[Si](C)(C)C	4402.1	Semi standard non polar	33892256
Cohibin D,2TMS,isomer #1	CCCCCCCCCCCCCCC/C=C/CCC(O[Si](C)(C)C)C(CCCCCCCCCCCC1=CC(C)OC1=O)O[Si](C)(C)C	4299.3	Semi standard non polar	33892256
Cohibin D,1TBDMS,isomer #1	CCCCCCCCCCCCCCC/C=C/CCC(O[Si](C)(C)C(C)(C)C)C(O)CCCCCCCCCCCC1=CC(C)OC1=O	4633.7	Semi standard non polar	33892256
Cohibin D,1TBDMS,isomer #2	CCCCCCCCCCCCCCC/C=C/CCC(O)C(CCCCCCCCCCCC1=CC(C)OC1=O)O[Si](C)(C)C(C)(C)C	4638.8	Semi standard non polar	33892256
Cohibin D,2TBDMS,isomer #1	CCCCCCCCCCCCCCC/C=C/CCC(O[Si](C)(C)C(C)(C)C)C(CCCCCCCCCCCC1=CC(C)OC1=O)O[Si](C)(C)C(C)(C)C	4790.6	Semi standard non polar	33892256

Spectra

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB014073

KNApSAcK ID

C00047031

Chemspider ID

35013922

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131751738

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
(). Yannai, Shmuel. (2004) Dictionary of food compounds with CD-ROM: Additives, flavors, and ingredients. Boca Raton: Chapman & Hall/CRC.. .
Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Showing metabocard for Cohibin D (HMDB0035398)

MOL for HMDB0035398 (Cohibin D)

3D MOL for HMDB0035398 (Cohibin D)

3D SDF for HMDB0035398 (Cohibin D)

3D-SDF for HMDB0035398 (Cohibin D)

PDB for HMDB0035398 (Cohibin D)

3D PDB for HMDB0035398 (Cohibin D)

SMILES for HMDB0035398 (Cohibin D)

INCHI for HMDB0035398 (Cohibin D)

Structure for HMDB0035398 (Cohibin D)

3D Structure for HMDB0035398 (Cohibin D)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

Derivatized