Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2012-09-13 11:46:08 UTC |
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Update Date | 2021-09-14 15:44:37 UTC |
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HMDB ID | HMDB0041887 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | Endalin |
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Description | Endalin, also known as endoxin, belongs to the class of organic compounds known as pyrimidine 2',3'-dideoxyribonucleosides. Pyrimidine 2',3'-dideoxyribonucleosides are compounds consisting of a pyrimidine linked to a ribose which lacks a hydroxyl group at positions 2 and 3. Endalin has been detected, but not quantified in, a few different foods, such as anatidaes (Anatidae), chickens (Gallus gallus), and domestic pigs (Sus scrofa domestica). This could make endalin a potential biomarker for the consumption of these foods. Based on a literature review a small amount of articles have been published on Endalin. |
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Structure | OCC1CCC(O1)N1C=C(F)C(=N)N=C1O InChI=1S/C9H12FN3O3/c10-6-3-13(9(15)12-8(6)11)7-2-1-5(4-14)16-7/h3,5,7,14H,1-2,4H2,(H2,11,12,15) |
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Synonyms | Value | Source |
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Digoxin-like immunoreactive substance | MeSH | Ouabain-like factor | MeSH | Digitalis-like factors | MeSH | Digoxin-immunoreactive factors | MeSH | Digoxin-like immunoreactive factor | MeSH | Endogenous digoxin-like factor | MeSH | Digoxin-like factors | MeSH | Endogenous digitalis-like factor | MeSH | Endoxin | MeSH | Ouabain-like natriuretic factor | MeSH | Endalin | MeSH |
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Chemical Formula | C9H12FN3O3 |
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Average Molecular Weight | 229.2083 |
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Monoisotopic Molecular Weight | 229.08626947 |
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IUPAC Name | 5-fluoro-1-[5-(hydroxymethyl)oxolan-2-yl]-4-imino-1,4-dihydropyrimidin-2-ol |
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Traditional Name | 5-fluoro-1-[5-(hydroxymethyl)oxolan-2-yl]-4-iminopyrimidin-2-ol |
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CAS Registry Number | 106908-12-7 |
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SMILES | OCC1CCC(O1)N1C=C(F)C(=N)N=C1O |
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InChI Identifier | InChI=1S/C9H12FN3O3/c10-6-3-13(9(15)12-8(6)11)7-2-1-5(4-14)16-7/h3,5,7,14H,1-2,4H2,(H2,11,12,15) |
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InChI Key | QBEIABZPRBJOFU-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as pyrimidine 2',3'-dideoxyribonucleosides. Pyrimidine 2',3'-dideoxyribonucleosides are compounds consisting of a pyrimidine linked to a ribose which lacks a hydroxyl group at positions 2 and 3. |
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Kingdom | Organic compounds |
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Super Class | Nucleosides, nucleotides, and analogues |
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Class | Pyrimidine nucleosides |
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Sub Class | Pyrimidine 2',3'-dideoxyribonucleosides |
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Direct Parent | Pyrimidine 2',3'-dideoxyribonucleosides |
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Alternative Parents | |
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Substituents | - Pyrimidine 2',3'-dideoxyribonucleoside
- Aminopyrimidine
- Halopyrimidine
- Pyrimidone
- Aryl fluoride
- Aryl halide
- Hydropyrimidine
- Pyrimidine
- Imidolactam
- Heteroaromatic compound
- Tetrahydrofuran
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Hydrocarbon derivative
- Primary amine
- Primary alcohol
- Organooxygen compound
- Organonitrogen compound
- Organofluoride
- Organohalogen compound
- Organic nitrogen compound
- Organic oxygen compound
- Amine
- Organopnictogen compound
- Organic oxide
- Alcohol
- Aromatic heteromonocyclic compound
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Molecular Framework | Aromatic heteromonocyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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Endalin,1TMS,isomer #1 | C[Si](C)(C)OCC1CCC(N2C=C(F)C(=N)N=C2O)O1 | 2154.1 | Semi standard non polar | 33892256 | Endalin,1TMS,isomer #2 | C[Si](C)(C)OC1=NC(=N)C(F)=CN1C1CCC(CO)O1 | 2092.3 | Semi standard non polar | 33892256 | Endalin,1TMS,isomer #3 | C[Si](C)(C)N=C1N=C(O)N(C2CCC(CO)O2)C=C1F | 2093.6 | Semi standard non polar | 33892256 | Endalin,2TMS,isomer #1 | C[Si](C)(C)OCC1CCC(N2C=C(F)C(=N)N=C2O[Si](C)(C)C)O1 | 2129.0 | Semi standard non polar | 33892256 | Endalin,2TMS,isomer #2 | C[Si](C)(C)N=C1N=C(O)N(C2CCC(CO[Si](C)(C)C)O2)C=C1F | 2096.8 | Semi standard non polar | 33892256 | Endalin,2TMS,isomer #3 | C[Si](C)(C)N=C1N=C(O[Si](C)(C)C)N(C2CCC(CO)O2)C=C1F | 2074.5 | Semi standard non polar | 33892256 | Endalin,3TMS,isomer #1 | C[Si](C)(C)N=C1N=C(O[Si](C)(C)C)N(C2CCC(CO[Si](C)(C)C)O2)C=C1F | 2104.9 | Semi standard non polar | 33892256 | Endalin,3TMS,isomer #1 | C[Si](C)(C)N=C1N=C(O[Si](C)(C)C)N(C2CCC(CO[Si](C)(C)C)O2)C=C1F | 2027.8 | Standard non polar | 33892256 | Endalin,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1CCC(N2C=C(F)C(=N)N=C2O)O1 | 2395.5 | Semi standard non polar | 33892256 | Endalin,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)OC1=NC(=N)C(F)=CN1C1CCC(CO)O1 | 2329.4 | Semi standard non polar | 33892256 | Endalin,1TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)N=C1N=C(O)N(C2CCC(CO)O2)C=C1F | 2368.4 | Semi standard non polar | 33892256 | Endalin,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1CCC(N2C=C(F)C(=N)N=C2O[Si](C)(C)C(C)(C)C)O1 | 2591.0 | Semi standard non polar | 33892256 | Endalin,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)N=C1N=C(O)N(C2CCC(CO[Si](C)(C)C(C)(C)C)O2)C=C1F | 2600.5 | Semi standard non polar | 33892256 | Endalin,2TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)N=C1N=C(O[Si](C)(C)C(C)(C)C)N(C2CCC(CO)O2)C=C1F | 2529.8 | Semi standard non polar | 33892256 | Endalin,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N=C1N=C(O[Si](C)(C)C(C)(C)C)N(C2CCC(CO[Si](C)(C)C(C)(C)C)O2)C=C1F | 2741.6 | Semi standard non polar | 33892256 | Endalin,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)N=C1N=C(O[Si](C)(C)C(C)(C)C)N(C2CCC(CO[Si](C)(C)C(C)(C)C)O2)C=C1F | 2715.4 | Standard non polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (Non-derivatized) - 70eV, Positive | splash10-004i-9410000000-cfa0332d389cc64b82be | 2017-09-01 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (2 TMS) - 70eV, Positive | splash10-0fbi-9623000000-453fbe04ccaa1e01e071 | 2017-10-06 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TMS_1_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TMS_2_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TMS_2_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TBDMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TBDMS_1_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - Endalin GC-MS (TBDMS_2_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 10V, Positive-QTOF | splash10-001i-0900000000-9b5eefb8dfe9f68006d0 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 20V, Positive-QTOF | splash10-001i-0900000000-aa5c890f72ac4ab4c488 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 40V, Positive-QTOF | splash10-0gxc-6900000000-bdc4d26410087d75b600 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 10V, Negative-QTOF | splash10-004i-0590000000-b07bddb859caa8c303f0 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 20V, Negative-QTOF | splash10-01ri-3930000000-8dad25ac1591bf33a0c2 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 40V, Negative-QTOF | splash10-0006-9500000000-d58e9da864cd76b80855 | 2017-09-01 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 10V, Negative-QTOF | splash10-004i-0090000000-08dd19e0b1e7698891db | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 20V, Negative-QTOF | splash10-0fbc-4920000000-e113213a923464a39e24 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 40V, Negative-QTOF | splash10-0006-9600000000-62c50d6416f63cf49692 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 10V, Positive-QTOF | splash10-001i-0590000000-7eb34ce77edafa4d8e76 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 20V, Positive-QTOF | splash10-001r-6910000000-1756effe4e3c03750dca | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - Endalin 40V, Positive-QTOF | splash10-03l0-9700000000-477dd097456a0b3cd699 | 2021-09-22 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-24 | Wishart Lab | View Spectrum |
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