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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2013-02-26 19:02:56 UTC
Update Date2023-02-21 17:29:22 UTC
HMDB IDHMDB0059765
Secondary Accession Numbers
  • HMDB59765
Metabolite Identification
Common Name3-Indolehydracrylic acid
Description3-Indolehydracrylic acid belongs to the class of organic compounds known as indolyl carboxylic acids and derivatives. Indolyl carboxylic acids and derivatives are compounds containing a carboxylic acid chain (of at least 2 carbon atoms) linked to an indole ring. 3-Indolehydracrylic acid is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1677000562
Synonyms
ValueSource
3-IndolehydracrylateGenerator
3-Hydroxy-3-(1H-indol-3-yl)propanoateGenerator
Chemical FormulaC11H11NO3
Average Molecular Weight205.2099
Monoisotopic Molecular Weight205.073893223
IUPAC Name3-hydroxy-3-(1H-indol-3-yl)propanoic acid
Traditional Name3-hydroxy-3-(1H-indol-3-yl)propanoic acid
CAS Registry NumberNot Available
SMILES
OC(CC(O)=O)C1=CNC2=C1C=CC=C2
InChI Identifier
InChI=1S/C11H11NO3/c13-10(5-11(14)15)8-6-12-9-4-2-1-3-7(8)9/h1-4,6,10,12-13H,5H2,(H,14,15)
InChI KeyHWRVAGPWLQXABS-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as indolyl carboxylic acids and derivatives. Indolyl carboxylic acids and derivatives are compounds containing a carboxylic acid chain (of at least 2 carbon atoms) linked to an indole ring.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassIndoles and derivatives
Sub ClassIndolyl carboxylic acids and derivatives
Direct ParentIndolyl carboxylic acids and derivatives
Alternative Parents
Substituents
  • Indolyl carboxylic acid derivative
  • 3-alkylindole
  • Indole
  • Beta-hydroxy acid
  • Hydroxy acid
  • Substituted pyrrole
  • Benzenoid
  • Pyrrole
  • Heteroaromatic compound
  • Secondary alcohol
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Carboxylic acid derivative
  • Azacycle
  • Aromatic alcohol
  • Hydrocarbon derivative
  • Alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Organic oxide
  • Organopnictogen compound
  • Organic oxygen compound
  • Carbonyl group
  • Organic nitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility2.5 g/LALOGPS
logP1.43ALOGPS
logP1.08ChemAxon
logS-1.9ALOGPS
pKa (Strongest Acidic)4.52ChemAxon
pKa (Strongest Basic)-3.1ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area73.32 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity54.41 m³·mol⁻¹ChemAxon
Polarizability20.83 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+146.44231661259
DarkChem[M-H]-144.08931661259
DeepCCS[M+H]+139.24430932474
DeepCCS[M-H]-136.84830932474
DeepCCS[M-2H]-171.57230932474
DeepCCS[M+Na]+146.25930932474
AllCCS[M+H]+145.932859911
AllCCS[M+H-H2O]+141.832859911
AllCCS[M+NH4]+149.832859911
AllCCS[M+Na]+150.932859911
AllCCS[M-H]-145.632859911
AllCCS[M+Na-2H]-145.732859911
AllCCS[M+HCOO]-145.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3-Indolehydracrylic acidOC(CC(O)=O)C1=CNC2=C1C=CC=C23733.1Standard polar33892256
3-Indolehydracrylic acidOC(CC(O)=O)C1=CNC2=C1C=CC=C21660.3Standard non polar33892256
3-Indolehydracrylic acidOC(CC(O)=O)C1=CNC2=C1C=CC=C22191.9Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3-Indolehydracrylic acid,1TMS,isomer #1C[Si](C)(C)OC(CC(=O)O)C1=C[NH]C2=CC=CC=C122158.6Semi standard non polar33892256
3-Indolehydracrylic acid,1TMS,isomer #2C[Si](C)(C)OC(=O)CC(O)C1=C[NH]C2=CC=CC=C122188.1Semi standard non polar33892256
3-Indolehydracrylic acid,1TMS,isomer #3C[Si](C)(C)N1C=C(C(O)CC(=O)O)C2=CC=CC=C212264.1Semi standard non polar33892256
3-Indolehydracrylic acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CC(O[Si](C)(C)C)C1=C[NH]C2=CC=CC=C122149.7Semi standard non polar33892256
3-Indolehydracrylic acid,2TMS,isomer #2C[Si](C)(C)OC(CC(=O)O)C1=CN([Si](C)(C)C)C2=CC=CC=C122203.3Semi standard non polar33892256
3-Indolehydracrylic acid,2TMS,isomer #3C[Si](C)(C)OC(=O)CC(O)C1=CN([Si](C)(C)C)C2=CC=CC=C122216.5Semi standard non polar33892256
3-Indolehydracrylic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CC(O[Si](C)(C)C)C1=CN([Si](C)(C)C)C2=CC=CC=C122192.1Semi standard non polar33892256
3-Indolehydracrylic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CC(O[Si](C)(C)C)C1=CN([Si](C)(C)C)C2=CC=CC=C122169.9Standard non polar33892256
3-Indolehydracrylic acid,3TMS,isomer #1C[Si](C)(C)OC(=O)CC(O[Si](C)(C)C)C1=CN([Si](C)(C)C)C2=CC=CC=C122332.8Standard polar33892256
3-Indolehydracrylic acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CC(=O)O)C1=C[NH]C2=CC=CC=C122452.9Semi standard non polar33892256
3-Indolehydracrylic acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(=O)CC(O)C1=C[NH]C2=CC=CC=C122449.2Semi standard non polar33892256
3-Indolehydracrylic acid,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)N1C=C(C(O)CC(=O)O)C2=CC=CC=C212524.0Semi standard non polar33892256
3-Indolehydracrylic acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(O[Si](C)(C)C(C)(C)C)C1=C[NH]C2=CC=CC=C122661.2Semi standard non polar33892256
3-Indolehydracrylic acid,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC(CC(=O)O)C1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC=C122676.1Semi standard non polar33892256
3-Indolehydracrylic acid,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC(=O)CC(O)C1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC=C122688.3Semi standard non polar33892256
3-Indolehydracrylic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(O[Si](C)(C)C(C)(C)C)C1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC=C122838.4Semi standard non polar33892256
3-Indolehydracrylic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(O[Si](C)(C)C(C)(C)C)C1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC=C122782.3Standard non polar33892256
3-Indolehydracrylic acid,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CC(O[Si](C)(C)C(C)(C)C)C1=CN([Si](C)(C)C(C)(C)C)C2=CC=CC=C122650.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3-Indolehydracrylic acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-014v-3900000000-efe0e8bbc3ede7e9651c2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Indolehydracrylic acid GC-MS (2 TMS) - 70eV, Positivesplash10-014i-4091000000-81aa312da86ef18e70f42017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Indolehydracrylic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3-Indolehydracrylic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 10V, Positive-QTOFsplash10-000i-0910000000-08f68fece44199b18f452017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 20V, Positive-QTOFsplash10-0079-0900000000-fece40ce37114642f69a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 40V, Positive-QTOFsplash10-002f-2900000000-433964bb3ce56395d1b22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 10V, Negative-QTOFsplash10-0udi-1980000000-9953224a479ed97389572017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 20V, Negative-QTOFsplash10-014i-1910000000-9a920ecf6e57cd0a12a22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 40V, Negative-QTOFsplash10-014i-3900000000-a6aac30e0ef8115537422017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 10V, Negative-QTOFsplash10-02tc-0910000000-b750016d2704835910002021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 20V, Negative-QTOFsplash10-014i-1900000000-c47437c0332ee628df032021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 40V, Negative-QTOFsplash10-014i-0900000000-89c3f30c8225ba6d5d622021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 10V, Positive-QTOFsplash10-0ap0-0940000000-b7c0574b4e36035a85622021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 20V, Positive-QTOFsplash10-014i-0900000000-5ea100ed9d98e8ec43672021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3-Indolehydracrylic acid 40V, Positive-QTOFsplash10-014l-2900000000-c3d39b4e38c90494cda82021-09-25Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
UrineDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound69733299
PDB IDNot Available
ChEBI ID89877
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available