Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2013-04-09 21:19:51 UTC
Update Date2023-02-21 17:29:40 UTC
HMDB IDHMDB0060016
Secondary Accession Numbers
  • HMDB60016
Metabolite Identification
Common NamePyrogallol-1-O-sulphate
DescriptionPyrogallol-1-O-sulphate belongs to the class of organic compounds known as phenylsulfates. Phenylsulfates are compounds containing a sulfuric acid group conjugated to a phenyl group. Pyrogallol-1-O-sulphate is an extremely weak basic (essentially neutral) compound (based on its pKa). Pyrogallol-1-O-sulphate is a conjugate of Pyrogallol and sulphate. Pyrogallol sulfate in the urine is a biomarker for the consumption of legumes. Pyrogallol or benzene-1,2,3-triol is a benzenetriol. The aquatic plant Myriophyllum spicatum produces pyrogallic acid.
Structure
Data?1677000580
Synonyms
ValueSource
Pyrogallol-1-O-sulfateGenerator
Pyrogallol-1-O-sulfuric acidGenerator
Pyrogallol-1-O-sulphuric acidGenerator
(2,3-Dihydroxyphenyl)oxidanesulfonateGenerator
(2,3-Dihydroxyphenyl)oxidanesulphonateGenerator
(2,3-Dihydroxyphenyl)oxidanesulphonic acidGenerator
Chemical FormulaC6H6O6S
Average Molecular Weight206.173
Monoisotopic Molecular Weight205.988508614
IUPAC Name(2,3-dihydroxyphenyl)oxidanesulfonic acid
Traditional Name(2,3-dihydroxyphenyl)oxidanesulfonic acid
CAS Registry NumberNot Available
SMILES
OC1=C(O)C(OS(O)(=O)=O)=CC=C1
InChI Identifier
InChI=1S/C6H6O6S/c7-4-2-1-3-5(6(4)8)12-13(9,10)11/h1-3,7-8H,(H,9,10,11)
InChI KeyNGVLEQPKHLWZLN-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylsulfates. Phenylsulfates are compounds containing a sulfuric acid group conjugated to a phenyl group.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassOrganic sulfuric acids and derivatives
Sub ClassArylsulfates
Direct ParentPhenylsulfates
Alternative Parents
Substituents
  • Phenylsulfate
  • Phenoxy compound
  • Catechol
  • 1-hydroxy-4-unsubstituted benzenoid
  • 1-hydroxy-2-unsubstituted benzenoid
  • Phenol
  • Monocyclic benzene moiety
  • Sulfuric acid monoester
  • Sulfate-ester
  • Sulfuric acid ester
  • Benzenoid
  • Hydrocarbon derivative
  • Organic oxygen compound
  • Organooxygen compound
  • Organic oxide
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility9.73 g/LALOGPS
logP-0.69ALOGPS
logP1.24ChemAxon
logS-1.3ALOGPS
pKa (Strongest Acidic)-2.6ChemAxon
pKa (Strongest Basic)-4.7ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count5ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area104.06 ŲChemAxon
Rotatable Bond Count2ChemAxon
Refractivity41.99 m³·mol⁻¹ChemAxon
Polarizability16.86 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+143.70631661259
DarkChem[M-H]-137.84331661259
DeepCCS[M+H]+140.1330932474
DeepCCS[M-H]-137.73430932474
DeepCCS[M-2H]-172.21230932474
DeepCCS[M+Na]+146.430932474
AllCCS[M+H]+143.832859911
AllCCS[M+H-H2O]+139.732859911
AllCCS[M+NH4]+147.632859911
AllCCS[M+Na]+148.732859911
AllCCS[M-H]-133.632859911
AllCCS[M+Na-2H]-134.432859911
AllCCS[M+HCOO]-135.332859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
Pyrogallol-1-O-sulphateOC1=C(O)C(OS(O)(=O)=O)=CC=C13486.5Standard polar33892256
Pyrogallol-1-O-sulphateOC1=C(O)C(OS(O)(=O)=O)=CC=C11625.7Standard non polar33892256
Pyrogallol-1-O-sulphateOC1=C(O)C(OS(O)(=O)=O)=CC=C11740.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
Pyrogallol-1-O-sulphate,1TMS,isomer #1C[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O)=C1O1899.5Semi standard non polar33892256
Pyrogallol-1-O-sulphate,1TMS,isomer #2C[Si](C)(C)OC1=C(O)C=CC=C1OS(=O)(=O)O1883.0Semi standard non polar33892256
Pyrogallol-1-O-sulphate,1TMS,isomer #3C[Si](C)(C)OS(=O)(=O)OC1=CC=CC(O)=C1O1899.1Semi standard non polar33892256
Pyrogallol-1-O-sulphate,2TMS,isomer #1C[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O)=C1O[Si](C)(C)C1939.4Semi standard non polar33892256
Pyrogallol-1-O-sulphate,2TMS,isomer #2C[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C1O1906.9Semi standard non polar33892256
Pyrogallol-1-O-sulphate,2TMS,isomer #3C[Si](C)(C)OC1=C(O)C=CC=C1OS(=O)(=O)O[Si](C)(C)C1863.3Semi standard non polar33892256
Pyrogallol-1-O-sulphate,3TMS,isomer #1C[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C1O[Si](C)(C)C1952.2Semi standard non polar33892256
Pyrogallol-1-O-sulphate,3TMS,isomer #1C[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C1O[Si](C)(C)C2069.5Standard non polar33892256
Pyrogallol-1-O-sulphate,3TMS,isomer #1C[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C)=C1O[Si](C)(C)C2362.0Standard polar33892256
Pyrogallol-1-O-sulphate,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O)=C1O2167.5Semi standard non polar33892256
Pyrogallol-1-O-sulphate,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=C(O)C=CC=C1OS(=O)(=O)O2154.2Semi standard non polar33892256
Pyrogallol-1-O-sulphate,1TBDMS,isomer #3CC(C)(C)[Si](C)(C)OS(=O)(=O)OC1=CC=CC(O)=C1O2161.3Semi standard non polar33892256
Pyrogallol-1-O-sulphate,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O)=C1O[Si](C)(C)C(C)(C)C2434.0Semi standard non polar33892256
Pyrogallol-1-O-sulphate,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1O2397.7Semi standard non polar33892256
Pyrogallol-1-O-sulphate,2TBDMS,isomer #3CC(C)(C)[Si](C)(C)OC1=C(O)C=CC=C1OS(=O)(=O)O[Si](C)(C)C(C)(C)C2384.6Semi standard non polar33892256
Pyrogallol-1-O-sulphate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1O[Si](C)(C)C(C)(C)C2629.5Semi standard non polar33892256
Pyrogallol-1-O-sulphate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1O[Si](C)(C)C(C)(C)C2841.5Standard non polar33892256
Pyrogallol-1-O-sulphate,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC1=CC=CC(OS(=O)(=O)O[Si](C)(C)C(C)(C)C)=C1O[Si](C)(C)C(C)(C)C2633.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - Pyrogallol-1-O-sulphate GC-MS (Non-derivatized) - 70eV, Positivesplash10-0570-7920000000-a7ccc06d113eb4fd33372017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pyrogallol-1-O-sulphate GC-MS (2 TMS) - 70eV, Positivesplash10-00g1-6392000000-d6be44d97643a59189d22017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - Pyrogallol-1-O-sulphate GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 10V, Positive-QTOFsplash10-0a4i-0390000000-af17223abf956fbc03812017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 20V, Positive-QTOFsplash10-0570-1910000000-0c71c445bdda888892f72017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 40V, Positive-QTOFsplash10-0gbj-9100000000-40a7eee22fd280644da12017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 10V, Negative-QTOFsplash10-0udi-0090000000-d046451f755082a020522017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 20V, Negative-QTOFsplash10-004i-2930000000-9e40b0c6715f7610c8312017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 40V, Negative-QTOFsplash10-0059-9700000000-79ddb37c1a0c68d31b342017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 10V, Positive-QTOFsplash10-0a6r-0950000000-f757b8c726cbc827f28a2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 20V, Positive-QTOFsplash10-0a4i-1900000000-acfb7fb0823f45fad68d2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 40V, Positive-QTOFsplash10-0zgi-9200000000-dc8378c33094343714652021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 10V, Negative-QTOFsplash10-0udi-0090000000-b346cb631d4a34e2848b2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 20V, Negative-QTOFsplash10-0f7k-9040000000-b1e3325828761570b2bc2021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - Pyrogallol-1-O-sulphate 40V, Negative-QTOFsplash10-0002-9100000000-89d6b04da68ddd41b8d42021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)MaleNormal details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)Both
Normal
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDFDB093749
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound54110629
PDB IDNot Available
ChEBI ID89613
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. van der Hooft JJ, de Vos RC, Mihaleva V, Bino RJ, Ridder L, de Roo N, Jacobs DM, van Duynhoven JP, Vervoort J: Structural elucidation and quantification of phenolic conjugates present in human urine after tea intake. Anal Chem. 2012 Aug 21;84(16):7263-71. doi: 10.1021/ac3017339. Epub 2012 Aug 2. [PubMed:22827565 ]