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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-05-17 00:56:19 UTC
Update Date2022-03-07 03:17:43 UTC
HMDB IDHMDB0060360
Secondary Accession Numbers
  • HMDB60360
Metabolite Identification
Common Name2,3,5-Trichlorodienelactone
Description2,3,5-Trichlorodienelactone belongs to the class of organic compounds known as halogenated fatty acids. These are fatty acids with a chain that carries a halogen atom (Cl,F,I,Br). 2,3,5-Trichlorodienelactone is an extremely weak basic (essentially neutral) compound (based on its pKa).
Structure
Data?1563866049
SynonymsNot Available
Chemical FormulaC6HCl3O4
Average Molecular Weight243.429
Monoisotopic Molecular Weight241.894041641
IUPAC Name2-chloro-2-[(2E)-3,4-dichloro-5-oxo-2,5-dihydrofuran-2-ylidene]acetic acid
Traditional Namechloro[(2E)-3,4-dichloro-5-oxofuran-2-ylidene]acetic acid
CAS Registry NumberNot Available
SMILES
OC(=O)C(\Cl)=C1/OC(=O)C(Cl)=C1Cl
InChI Identifier
InChI=1S/C6HCl3O4/c7-1-2(8)6(12)13-4(1)3(9)5(10)11/h(H,10,11)/b4-3+
InChI KeyDDHLNXMDAUDTBS-ONEGZZNKSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as halogenated fatty acids. These are fatty acids with a chain that carries a halogen atom (Cl,F,I,Br).
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acids and conjugates
Direct ParentHalogenated fatty acids
Alternative Parents
Substituents
  • Halogenated fatty acid
  • 2-furanone
  • Dicarboxylic acid or derivatives
  • Alpha-halocarboxylic acid
  • Alpha-halocarboxylic acid or derivatives
  • Dihydrofuran
  • Enol ester
  • Vinylogous halide
  • Alpha,beta-unsaturated carboxylic ester
  • Enoate ester
  • Carboxylic acid ester
  • Lactone
  • Carboxylic acid derivative
  • Oxacycle
  • Carboxylic acid
  • Chloroalkene
  • Haloalkene
  • Organoheterocyclic compound
  • Vinyl halide
  • Vinyl chloride
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxygen compound
  • Organic oxide
  • Organohalogen compound
  • Organochloride
  • Organooxygen compound
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.047 g/LALOGPS
logP2.42ALOGPS
logP1.2ChemAxon
logS-3.7ALOGPS
pKa (Strongest Acidic)1.85ChemAxon
pKa (Strongest Basic)-7.4ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area63.6 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity47.62 m³·mol⁻¹ChemAxon
Polarizability18.18 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+145.00830932474
DeepCCS[M-H]-142.6530932474
DeepCCS[M-2H]-176.77430932474
DeepCCS[M+Na]+151.4830932474
AllCCS[M+H]+145.532859911
AllCCS[M+H-H2O]+141.632859911
AllCCS[M+NH4]+149.132859911
AllCCS[M+Na]+150.132859911
AllCCS[M-H]-137.132859911
AllCCS[M+Na-2H]-137.932859911
AllCCS[M+HCOO]-138.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2,3,5-TrichlorodienelactoneOC(=O)C(\Cl)=C1/OC(=O)C(Cl)=C1Cl2770.4Standard polar33892256
2,3,5-TrichlorodienelactoneOC(=O)C(\Cl)=C1/OC(=O)C(Cl)=C1Cl1858.0Standard non polar33892256
2,3,5-TrichlorodienelactoneOC(=O)C(\Cl)=C1/OC(=O)C(Cl)=C1Cl1724.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
2,3,5-Trichlorodienelactone,1TMS,isomer #1C[Si](C)(C)OC(=O)/C(Cl)=C1\OC(=O)C(Cl)=C1Cl1807.9Semi standard non polar33892256
2,3,5-Trichlorodienelactone,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)/C(Cl)=C1\OC(=O)C(Cl)=C1Cl2036.4Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2,3,5-Trichlorodienelactone GC-MS (Non-derivatized) - 70eV, Positivesplash10-0007-9320000000-cfcd31be32d9d97451b62017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2,3,5-Trichlorodienelactone GC-MS (1 TMS) - 70eV, Positivesplash10-00di-9151000000-846a2fd525f500ac31cc2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2,3,5-Trichlorodienelactone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2,3,5-Trichlorodienelactone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3,5-Trichlorodienelactone 10V, Positive-QTOFsplash10-00dm-0490000000-21e8dfb5090125a035252017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3,5-Trichlorodienelactone 20V, Positive-QTOFsplash10-006y-0390000000-2f9a0fb025e254d51f462017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3,5-Trichlorodienelactone 40V, Positive-QTOFsplash10-0udj-0900000000-793250acbc8ca93ff10d2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3,5-Trichlorodienelactone 10V, Negative-QTOFsplash10-0007-0970000000-edaa50bb084749367a192017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3,5-Trichlorodienelactone 20V, Negative-QTOFsplash10-0005-0970000000-a050982fa548974fa73a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2,3,5-Trichlorodienelactone 40V, Negative-QTOFsplash10-0002-0900000000-f6aa28cd40a0d0f114a42017-10-06Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDC18242
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound14951695
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Magrane M: UniProt Knowledgebase: a hub of integrated protein data. Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011. [PubMed:21447597 ]
  2. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  3. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  4. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  5. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  6. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.

Enzymes

General function:
Involved in hydrolase activity
Specific function:
Cysteine hydrolase. Can convert the prodrug olmesartan medoxomil into its pharmacologically active metabolite olmerstatan, an angiotensin receptor blocker, in liver and intestine. May also activate beta-lactam antibiotics faropenem medoxomil and lenampicillin.
Gene Name:
CMBL
Uniprot ID:
Q96DG6
Molecular weight:
Not Available
Reactions
2,3,5-Trichlorodienelactone + Water → 2,3,5-Trichloromaleylacetatedetails