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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-06-15 18:25:17 UTC
Update Date2021-09-14 15:43:40 UTC
HMDB IDHMDB0060642
Secondary Accession Numbers
  • HMDB60642
Metabolite Identification
Common NameN-depropylpropafenone
DescriptionN-depropylpropafenone, also known as N-desmethylpropafenone, belongs to the class of organic compounds known as linear 1,3-diarylpropanoids. These are organic compounds with a structure based on a C6-C3-C6 skeleton, where the two benzene rings are not linked together. N-depropylpropafenone is a very strong basic compound (based on its pKa).
Structure
Data?1563866086
Synonyms
ValueSource
N-DesmethylpropafenoneHMDB
1-(2-(3-Amino-2-hydroxypropoxy)phenyl)-3-phenyl-1-propanoneHMDB
N-DespropylpropafenoneMeSH
N-DepropylpropafenoneMeSH
Chemical FormulaC18H21NO3
Average Molecular Weight299.3642
Monoisotopic Molecular Weight299.152143543
IUPAC Name1-[2-(3-amino-2-hydroxypropoxy)phenyl]-3-phenylpropan-1-one
Traditional Name1-[2-(3-amino-2-hydroxypropoxy)phenyl]-3-phenylpropan-1-one
CAS Registry NumberNot Available
SMILES
NCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1
InChI Identifier
InChI=1S/C18H21NO3/c19-12-15(20)13-22-18-9-5-4-8-16(18)17(21)11-10-14-6-2-1-3-7-14/h1-9,15,20H,10-13,19H2
InChI KeyHIGKMVIPYOFHBP-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as linear 1,3-diarylpropanoids. These are organic compounds with a structure based on a C6-C3-C6 skeleton, where the two benzene rings are not linked together.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassLinear 1,3-diarylpropanoids
Sub ClassNot Available
Direct ParentLinear 1,3-diarylpropanoids
Alternative Parents
Substituents
  • Linear 1,3-diarylpropanoid
  • Alkyl-phenylketone
  • Butyrophenone
  • Phenylketone
  • Benzoyl
  • Phenol ether
  • Phenoxy compound
  • Aryl ketone
  • Aryl alkyl ketone
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • 1,2-aminoalcohol
  • Secondary alcohol
  • Ketone
  • Ether
  • Organic oxide
  • Organonitrogen compound
  • Primary aliphatic amine
  • Organooxygen compound
  • Alcohol
  • Organic nitrogen compound
  • Organopnictogen compound
  • Primary amine
  • Hydrocarbon derivative
  • Amine
  • Organic oxygen compound
  • Aromatic homomonocyclic compound
Molecular FrameworkAromatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.076 g/LALOGPS
logP1.81ALOGPS
logP2.22ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)14.09ChemAxon
pKa (Strongest Basic)9.12ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area72.55 ŲChemAxon
Rotatable Bond Count8ChemAxon
Refractivity86.16 m³·mol⁻¹ChemAxon
Polarizability33.4 ųChemAxon
Number of Rings2ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+170.29631661259
DarkChem[M-H]-168.28531661259
DeepCCS[M+H]+171.02730932474
DeepCCS[M-H]-168.66930932474
DeepCCS[M-2H]-201.55530932474
DeepCCS[M+Na]+177.1230932474
AllCCS[M+H]+173.032859911
AllCCS[M+H-H2O]+169.632859911
AllCCS[M+NH4]+176.232859911
AllCCS[M+Na]+177.132859911
AllCCS[M-H]-175.632859911
AllCCS[M+Na-2H]-175.732859911
AllCCS[M+HCOO]-175.932859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
N-depropylpropafenoneNCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C13382.8Standard polar33892256
N-depropylpropafenoneNCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12554.3Standard non polar33892256
N-depropylpropafenoneNCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12664.6Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
N-depropylpropafenone,1TMS,isomer #1C[Si](C)(C)OC(CN)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12603.5Semi standard non polar33892256
N-depropylpropafenone,1TMS,isomer #1C[Si](C)(C)OC(CN)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12603.5Semi standard non polar33892256
N-depropylpropafenone,1TMS,isomer #2C[Si](C)(C)NCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12698.5Semi standard non polar33892256
N-depropylpropafenone,1TMS,isomer #2C[Si](C)(C)NCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12698.5Semi standard non polar33892256
N-depropylpropafenone,2TMS,isomer #1C[Si](C)(C)NCC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C2628.7Semi standard non polar33892256
N-depropylpropafenone,2TMS,isomer #1C[Si](C)(C)NCC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C2674.9Standard non polar33892256
N-depropylpropafenone,2TMS,isomer #1C[Si](C)(C)NCC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C3233.0Standard polar33892256
N-depropylpropafenone,2TMS,isomer #2C[Si](C)(C)N(CC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C2796.3Semi standard non polar33892256
N-depropylpropafenone,2TMS,isomer #2C[Si](C)(C)N(CC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C2841.4Standard non polar33892256
N-depropylpropafenone,2TMS,isomer #2C[Si](C)(C)N(CC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C3342.1Standard polar33892256
N-depropylpropafenone,3TMS,isomer #1C[Si](C)(C)OC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)CN([Si](C)(C)C)[Si](C)(C)C2831.7Semi standard non polar33892256
N-depropylpropafenone,3TMS,isomer #1C[Si](C)(C)OC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)CN([Si](C)(C)C)[Si](C)(C)C2795.6Standard non polar33892256
N-depropylpropafenone,3TMS,isomer #1C[Si](C)(C)OC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)CN([Si](C)(C)C)[Si](C)(C)C3119.8Standard polar33892256
N-depropylpropafenone,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CN)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12830.0Semi standard non polar33892256
N-depropylpropafenone,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(CN)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12830.0Semi standard non polar33892256
N-depropylpropafenone,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)NCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12924.0Semi standard non polar33892256
N-depropylpropafenone,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)NCC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C12924.0Semi standard non polar33892256
N-depropylpropafenone,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NCC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C3055.2Semi standard non polar33892256
N-depropylpropafenone,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NCC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C3077.3Standard non polar33892256
N-depropylpropafenone,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NCC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)O[Si](C)(C)C(C)(C)C3389.4Standard polar33892256
N-depropylpropafenone,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C(C)(C)C3266.5Semi standard non polar33892256
N-depropylpropafenone,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C(C)(C)C3156.6Standard non polar33892256
N-depropylpropafenone,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(O)COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)[Si](C)(C)C(C)(C)C3435.0Standard polar33892256
N-depropylpropafenone,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3487.0Semi standard non polar33892256
N-depropylpropafenone,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3309.4Standard non polar33892256
N-depropylpropafenone,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(COC1=CC=CC=C1C(=O)CCC1=CC=CC=C1)CN([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C3298.5Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - N-depropylpropafenone GC-MS (Non-derivatized) - 70eV, Positivesplash10-001i-9430000000-b062d5e3fb7efd9406092017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-depropylpropafenone GC-MS (1 TMS) - 70eV, Positivesplash10-0089-9320000000-b9ca5fe662f49a9ed4072017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-depropylpropafenone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-depropylpropafenone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-depropylpropafenone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - N-depropylpropafenone GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 10V, Positive-QTOFsplash10-0ue9-2479000000-18bfe8d0e73aff3ceb1a2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 20V, Positive-QTOFsplash10-059x-5940000000-0a43531887117cebb7cd2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 40V, Positive-QTOFsplash10-05fr-5900000000-26355ccc550eacd75a622017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 10V, Negative-QTOFsplash10-002b-0090000000-ccac25621585d9528a332017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 20V, Negative-QTOFsplash10-004i-0190000000-b6348c39b803e5649c592017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 40V, Negative-QTOFsplash10-0006-6930000000-408c76ae29c09fffd1c22017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 10V, Negative-QTOFsplash10-004j-0090000000-d283e1b169d1ae9466ac2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 20V, Negative-QTOFsplash10-05dl-3590000000-f3b58a485bee29be27012021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 40V, Negative-QTOFsplash10-05ot-2920000000-46531ffcfdb2312a2fb12021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 10V, Positive-QTOFsplash10-0ufr-0369000000-8cbf218dc5094c6362402021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 20V, Positive-QTOFsplash10-0a4i-9621000000-ab79b0945a240d9b94642021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - N-depropylpropafenone 40V, Positive-QTOFsplash10-0a4i-9800000000-7e5af127b7dc18287bfa2021-09-23Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Membrane (predicted from logP)
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound128820
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available