Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2013-07-09 16:10:40 UTC
Update Date2021-09-14 14:58:51 UTC
HMDB IDHMDB0060979
Secondary Accession Numbers
  • HMDB60979
Metabolite Identification
Common Namehydroxyrepaglinide
Descriptionhydroxyrepaglinide belongs to the class of organic compounds known as phenylpiperidines. Phenylpiperidines are compounds containing a phenylpiperidine skeleton, which consists of a piperidine bound to a phenyl group. hydroxyrepaglinide is a strong basic compound (based on its pKa). hydroxyrepaglinide is a metabolite of repaglinide. Repaglinide is for the treatment of type II diabetes. Repaglinide belongs to the meglitinide class of blood glucose-lowering drugs. It is supplied by Novo Nordisk. It is sold in Japan by Dainippon Sumitomo Pharma.
Structure
Data?1563866130
SynonymsNot Available
Chemical FormulaC27H36N2O5
Average Molecular Weight468.5851
Monoisotopic Molecular Weight468.262422272
IUPAC Name2-ethoxy-4-[({1-[2-(3-hydroxypiperidin-1-yl)phenyl]-3-methylbutyl}-C-hydroxycarbonimidoyl)methyl]benzoic acid
Traditional Name2-ethoxy-4-[({1-[2-(3-hydroxypiperidin-1-yl)phenyl]-3-methylbutyl}-C-hydroxycarbonimidoyl)methyl]benzoic acid
CAS Registry NumberNot Available
SMILES
CCOC1=C(C=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)=C1)C(O)=O
InChI Identifier
InChI=1S/C27H36N2O5/c1-4-34-25-15-19(11-12-22(25)27(32)33)16-26(31)28-23(14-18(2)3)21-9-5-6-10-24(21)29-13-7-8-20(30)17-29/h5-6,9-12,15,18,20,23,30H,4,7-8,13-14,16-17H2,1-3H3,(H,28,31)(H,32,33)
InChI KeyOBMAZJVHPAVADF-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as phenylpiperidines. Phenylpiperidines are compounds containing a phenylpiperidine skeleton, which consists of a piperidine bound to a phenyl group.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPiperidines
Sub ClassPhenylpiperidines
Direct ParentPhenylpiperidines
Alternative Parents
Substituents
  • Phenylpiperidine
  • Phenylacetamide
  • Benzoic acid or derivatives
  • Benzoic acid
  • Phenoxy compound
  • Benzoyl
  • Phenol ether
  • Tertiary aliphatic/aromatic amine
  • Dialkylarylamine
  • Aniline or substituted anilines
  • Alkyl aryl ether
  • Benzenoid
  • Monocyclic benzene moiety
  • Amino acid
  • Tertiary amine
  • Amino acid or derivatives
  • Secondary carboxylic acid amide
  • Secondary alcohol
  • 1,2-aminoalcohol
  • Carboxamide group
  • Azacycle
  • Carboxylic acid derivative
  • Carboxylic acid
  • Ether
  • Monocarboxylic acid or derivatives
  • Carbonyl group
  • Alcohol
  • Organooxygen compound
  • Organic nitrogen compound
  • Organic oxygen compound
  • Amine
  • Organonitrogen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility0.0085 g/LALOGPS
logP4.02ALOGPS
logP4.41ChemAxon
logS-4.7ALOGPS
pKa (Strongest Acidic)3.91ChemAxon
pKa (Strongest Basic)3.1ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count7ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area102.59 ŲChemAxon
Rotatable Bond Count10ChemAxon
Refractivity133.71 m³·mol⁻¹ChemAxon
Polarizability52.1 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+207.57231661259
DarkChem[M-H]-204.91831661259
DeepCCS[M+H]+210.55830932474
DeepCCS[M-H]-208.230932474
DeepCCS[M-2H]-241.08430932474
DeepCCS[M+Na]+216.65130932474
AllCCS[M+H]+215.932859911
AllCCS[M+H-H2O]+214.032859911
AllCCS[M+NH4]+217.732859911
AllCCS[M+Na]+218.232859911
AllCCS[M-H]-209.732859911
AllCCS[M+Na-2H]-211.032859911
AllCCS[M+HCOO]-212.632859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
hydroxyrepaglinideCCOC1=C(C=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)=C1)C(O)=O4239.6Standard polar33892256
hydroxyrepaglinideCCOC1=C(C=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)=C1)C(O)=O3422.5Standard non polar33892256
hydroxyrepaglinideCCOC1=C(C=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)=C1)C(O)=O3673.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
hydroxyrepaglinide,1TMS,isomer #1CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)O[Si](C)(C)C)=CC=C1C(=O)O3689.0Semi standard non polar33892256
hydroxyrepaglinide,1TMS,isomer #2CCOC1=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C)C2)=CC=C1C(=O)O3754.0Semi standard non polar33892256
hydroxyrepaglinide,1TMS,isomer #3CCOC1=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)=CC=C1C(=O)O[Si](C)(C)C3703.1Semi standard non polar33892256
hydroxyrepaglinide,2TMS,isomer #1CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C)C2)O[Si](C)(C)C)=CC=C1C(=O)O3632.8Semi standard non polar33892256
hydroxyrepaglinide,2TMS,isomer #2CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)O[Si](C)(C)C)=CC=C1C(=O)O[Si](C)(C)C3590.6Semi standard non polar33892256
hydroxyrepaglinide,2TMS,isomer #3CCOC1=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C)C2)=CC=C1C(=O)O[Si](C)(C)C3603.9Semi standard non polar33892256
hydroxyrepaglinide,3TMS,isomer #1CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C)C2)O[Si](C)(C)C)=CC=C1C(=O)O[Si](C)(C)C3552.9Semi standard non polar33892256
hydroxyrepaglinide,1TBDMS,isomer #1CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)O[Si](C)(C)C(C)(C)C)=CC=C1C(=O)O3899.8Semi standard non polar33892256
hydroxyrepaglinide,1TBDMS,isomer #2CCOC1=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C(C)(C)C)C2)=CC=C1C(=O)O3964.6Semi standard non polar33892256
hydroxyrepaglinide,1TBDMS,isomer #3CCOC1=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)=CC=C1C(=O)O[Si](C)(C)C(C)(C)C3928.9Semi standard non polar33892256
hydroxyrepaglinide,2TBDMS,isomer #1CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C(C)(C)C)C2)O[Si](C)(C)C(C)(C)C)=CC=C1C(=O)O3985.0Semi standard non polar33892256
hydroxyrepaglinide,2TBDMS,isomer #2CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O)C2)O[Si](C)(C)C(C)(C)C)=CC=C1C(=O)O[Si](C)(C)C(C)(C)C3946.0Semi standard non polar33892256
hydroxyrepaglinide,2TBDMS,isomer #3CCOC1=CC(CC(O)=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C(C)(C)C)C2)=CC=C1C(=O)O[Si](C)(C)C(C)(C)C3967.2Semi standard non polar33892256
hydroxyrepaglinide,3TBDMS,isomer #1CCOC1=CC(CC(=NC(CC(C)C)C2=CC=CC=C2N2CCCC(O[Si](C)(C)C(C)(C)C)C2)O[Si](C)(C)C(C)(C)C)=CC=C1C(=O)O[Si](C)(C)C(C)(C)C4023.2Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - hydroxyrepaglinide GC-MS (Non-derivatized) - 70eV, Positivesplash10-0f89-1525900000-1959b7f9262511e8be3a2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - hydroxyrepaglinide GC-MS (3 TMS) - 70eV, Positivesplash10-01ba-3013049000-b5200b7086d1fc31a7552017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - hydroxyrepaglinide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 10V, Positive-QTOFsplash10-0udi-0030900000-fe2a7576ecaa84ae291b2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 20V, Positive-QTOFsplash10-0nou-1290600000-eb578b1b9e8884297ce02017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 40V, Positive-QTOFsplash10-0cgl-4981200000-e78cbfb5dbcba53c745e2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 10V, Negative-QTOFsplash10-01b9-0000900000-24c355e900f6b491ceb62017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 20V, Negative-QTOFsplash10-0ab9-0221900000-0fdb801af62fcc8ddb6c2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 40V, Negative-QTOFsplash10-0006-9757200000-91e7395dc03c6ce9feab2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 10V, Negative-QTOFsplash10-01b9-0321900000-49491f35a3279e76ffa32021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 20V, Negative-QTOFsplash10-0006-0429600000-ee2efac7b75996887bdf2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 40V, Negative-QTOFsplash10-004j-1963100000-5143703a60c7a96e3f242021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 10V, Positive-QTOFsplash10-00xr-0100900000-c1e9c84bd276f348e0e52021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 20V, Positive-QTOFsplash10-00dj-0270900000-06daa69e0687163420d12021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - hydroxyrepaglinide 40V, Positive-QTOFsplash10-01q9-2910100000-d3c133d353771a722c742021-09-22Wishart LabView Spectrum
Biological Properties
Cellular Locations
  • Cytoplasm
  • Membrane (predicted from logP)
Biospecimen Locations
  • Blood
  • Urine
Tissue Locations
  • Kidney
  • Liver
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
UrineExpected but not QuantifiedNot QuantifiedNot AvailableNot AvailableNormal
      Not Available
details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound46781896
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General ReferencesNot Available