Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2014-04-16 17:49:30 UTC
Update Date2023-02-21 17:30:24 UTC
HMDB IDHMDB0061679
Secondary Accession Numbers
  • HMDB61679
Metabolite Identification
Common Name3,4,5,6-Tetrahydrohippuric acid
Description3,4,5,6-Tetrahydrohippuric acid belongs to the class of organic compounds known as n-acyl-alpha amino acids. N-acyl-alpha amino acids are compounds containing an alpha amino acid which bears an acyl group at its terminal nitrogen atom. 3,4,5,6-Tetrahydrohippuric acid is a moderately basic compound (based on its pKa). An N-acylglycine in which the acyl group is specifed as cyclohex-1-en-1-ylcarbonyl.
Structure
Data?1677000624
Synonyms
ValueSource
3,4,5,6-TetrahydrohippateGenerator
3,4,5,6-Tetrahydrohippic acidGenerator
Chemical FormulaC9H13NO3
Average Molecular Weight183.2044
Monoisotopic Molecular Weight183.089543287
IUPAC Name2-[(cyclohex-1-en-1-yl)formamido]acetic acid
Traditional Name(cyclohex-1-en-1-ylformamido)acetic acid
CAS Registry NumberNot Available
SMILES
OC(=O)CNC(=O)C1=CCCCC1
InChI Identifier
InChI=1S/C9H13NO3/c11-8(12)6-10-9(13)7-4-2-1-3-5-7/h4H,1-3,5-6H2,(H,10,13)(H,11,12)
InChI KeyOSUSJBWSQBKORT-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as n-acyl-alpha amino acids. N-acyl-alpha amino acids are compounds containing an alpha amino acid which bears an acyl group at its terminal nitrogen atom.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassAmino acids, peptides, and analogues
Direct ParentN-acyl-alpha amino acids
Alternative Parents
Substituents
  • N-acyl-alpha-amino acid
  • Secondary carboxylic acid amide
  • Carboxamide group
  • Monocarboxylic acid or derivatives
  • Carboxylic acid
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
Water Solubility3.86 g/LALOGPS
logP0.5ALOGPS
logP0.64ChemAxon
logS-1.7ALOGPS
pKa (Strongest Acidic)4.08ChemAxon
pKa (Strongest Basic)-0.32ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area66.4 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity47.53 m³·mol⁻¹ChemAxon
Polarizability18.97 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+141.09631661259
DarkChem[M-H]-136.18431661259
DeepCCS[M+H]+143.22530932474
DeepCCS[M-H]-140.8330932474
DeepCCS[M-2H]-176.12130932474
DeepCCS[M+Na]+150.55630932474
AllCCS[M+H]+140.332859911
AllCCS[M+H-H2O]+136.332859911
AllCCS[M+NH4]+144.132859911
AllCCS[M+Na]+145.132859911
AllCCS[M-H]-141.032859911
AllCCS[M+Na-2H]-141.932859911
AllCCS[M+HCOO]-143.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
3,4,5,6-Tetrahydrohippuric acidOC(=O)CNC(=O)C1=CCCCC12809.1Standard polar33892256
3,4,5,6-Tetrahydrohippuric acidOC(=O)CNC(=O)C1=CCCCC11602.4Standard non polar33892256
3,4,5,6-Tetrahydrohippuric acidOC(=O)CNC(=O)C1=CCCCC11776.8Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
3,4,5,6-Tetrahydrohippuric acid,1TMS,isomer #1C[Si](C)(C)OC(=O)CNC(=O)C1=CCCCC11846.4Semi standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,1TMS,isomer #2C[Si](C)(C)N(CC(=O)O)C(=O)C1=CCCCC11879.1Semi standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CN(C(=O)C1=CCCCC1)[Si](C)(C)C1881.1Semi standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CN(C(=O)C1=CCCCC1)[Si](C)(C)C1791.9Standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,2TMS,isomer #1C[Si](C)(C)OC(=O)CN(C(=O)C1=CCCCC1)[Si](C)(C)C2197.6Standard polar33892256
3,4,5,6-Tetrahydrohippuric acid,1TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CNC(=O)C1=CCCCC12108.6Semi standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,1TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(CC(=O)O)C(=O)C1=CCCCC12118.1Semi standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CN(C(=O)C1=CCCCC1)[Si](C)(C)C(C)(C)C2358.3Semi standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CN(C(=O)C1=CCCCC1)[Si](C)(C)C(C)(C)C2184.3Standard non polar33892256
3,4,5,6-Tetrahydrohippuric acid,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)OC(=O)CN(C(=O)C1=CCCCC1)[Si](C)(C)C(C)(C)C2408.9Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a4i-3900000000-2de02ed84bfe459775db2017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid GC-MS (1 TMS) - 70eV, Positivesplash10-052r-6910000000-57b42f5565dbe18851762017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 10V, Positive-QTOFsplash10-053r-1900000000-3ee9151a9f87a9caa0f32015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 20V, Positive-QTOFsplash10-0a4i-3900000000-90730ec6a78cbb29b2ce2015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 40V, Positive-QTOFsplash10-0pc3-9100000000-95bf41f14593c446c2c82015-04-24Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 10V, Negative-QTOFsplash10-001i-0900000000-70bf6e5ee9f7a02932df2015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 20V, Negative-QTOFsplash10-001i-3900000000-c64bb2447e32117b8cf02015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 40V, Negative-QTOFsplash10-0ac3-9100000000-9223d767a1e61d5b44942015-04-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 10V, Positive-QTOFsplash10-0a4i-0900000000-0b6aeca1b166929aaf0f2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 20V, Positive-QTOFsplash10-0540-6900000000-30200394f4e90b142edb2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 40V, Positive-QTOFsplash10-003r-9000000000-0318b150a67f48986eac2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 10V, Negative-QTOFsplash10-001i-0900000000-8b1dda633123efae2d1c2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 20V, Negative-QTOFsplash10-001l-9100000000-72d0da1d2ed019b5b4402021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 3,4,5,6-Tetrahydrohippuric acid 40V, Negative-QTOFsplash10-001i-9000000000-d389b844d859dc8356692021-09-22Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-09-24Wishart LabView Spectrum

IR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M-H]-)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+H]+)2023-02-04FELIX labView Spectrum
Predicted IR SpectrumIR Ion Spectrum (Predicted IRIS Spectrum, Adduct: [M+Na]+)2023-02-04FELIX labView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
  • Urine
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodExpected but not QuantifiedNot QuantifiedAdult (>18 years old)BothAsthma details
UrineDetected but not QuantifiedNot QuantifiedAdult (>18 years old)BothAsthma details
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound149048
PDB IDNot Available
ChEBI ID71172
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Roux A, Xu Y, Heilier JF, Olivier MF, Ezan E, Tabet JC, Junot C: Annotation of the human adult urinary metabolome and metabolite identification using ultra high performance liquid chromatography coupled to a linear quadrupole ion trap-Orbitrap mass spectrometer. Anal Chem. 2012 Aug 7;84(15):6429-37. doi: 10.1021/ac300829f. Epub 2012 Jul 17. [PubMed:22770225 ]