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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-03-16 03:34:00 UTC
Update Date2022-03-07 03:17:50 UTC
HMDB IDHMDB0062220
Secondary Accession Numbers
  • HMDB62220
Metabolite Identification
Common Name13Z,16Z-docosadienoyl-CoA
DescriptionDocosadienoyl-CoA belongs to the class of organic compounds known as dialkylamines. These are organic compounds containing a dialkylamine group, characterized by two alkyl groups bonded to the amino nitrogen. Docosadienoyl-CoA is a strong basic compound (based on its pKa). Within humans, docosadienoyl-CoA participates in a number of enzymatic reactions. In particular, docosadienoyl-CoA and glycerol 3-phosphate can be converted into lpa(22:2(13Z,16Z)/0:0) through its interaction with the enzyme glycerol-3-phosphate acyltransferase. In addition, lpa(22:2(13Z,16Z)/0:0) and docosadienoyl-CoA can be converted into PA(22:2(13Z,16Z)/22:2(13Z,16Z)); which is catalyzed by the enzyme 1-acyl-sn-glycerol-3-phosphate acyltransferase. In humans, docosadienoyl-CoA is involved in the metabolic disorder called de novo triacylglycerol biosynthesis pathway.
Structure
Data?1563866281
Synonyms
ValueSource
(13Z,16Z)-Docosadi-13,16-enoyl-CoAKegg
13Z,16Z-Docosadienoyl-CoAKegg
(13Z,16Z)-docosadienoyl-CoASMPDB, HMDB
(13Z,16Z)-docosadienoyl-coenzyme ASMPDB, HMDB
docosadienoyl-coenzyme ASMPDB, HMDB
CoA(22:2(13Z,16Z))SMPDB, HMDB
Docosadienoyl-CoASMPDB, HMDB
Chemical FormulaC43H74N7O17P3S
Average Molecular Weight1086.08
Monoisotopic Molecular Weight1085.407476119
IUPAC Name{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-2-({[({[(3R)-3-{[2-({2-[(13Z,16Z)-docosa-13,16-dienoylsulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}-3-hydroxy-2,2-dimethylpropoxy](hydroxy)phosphoryl}oxy)(hydroxy)phosphoryl]oxy}methyl)-4-hydroxyoxolan-3-yl]oxy}phosphonic acid
Traditional Name[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-2-[({[(3R)-3-{[2-({2-[(13Z,16Z)-docosa-13,16-dienoylsulfanyl]ethyl}carbamoyl)ethyl]carbamoyl}-3-hydroxy-2,2-dimethylpropoxy(hydroxy)phosphoryl]oxy(hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxyphosphonic acid
CAS Registry NumberNot Available
SMILES
CCCCC\C=C/C\C=C/CCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N
InChI Identifier
InChI=1S/C43H74N7O17P3S/c1-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-22-23-34(52)71-27-26-45-33(51)24-25-46-41(55)38(54)43(2,3)29-64-70(61,62)67-69(59,60)63-28-32-37(66-68(56,57)58)36(53)42(65-32)50-31-49-35-39(44)47-30-48-40(35)50/h8-9,11-12,30-32,36-38,42,53-54H,4-7,10,13-29H2,1-3H3,(H,45,51)(H,46,55)(H,59,60)(H,61,62)(H2,44,47,48)(H2,56,57,58)/b9-8-,12-11-/t32-,36-,37-,38+,42-/m1/s1
InChI KeyZLXWEKYVHIYDIY-HCUKIJCOSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dialkylamines. These are organic compounds containing a dialkylamine group, characterized by two alkyl groups bonded to the amino nitrogen.
KingdomOrganic compounds
Super ClassOrganic nitrogen compounds
ClassOrganonitrogen compounds
Sub ClassAmines
Direct ParentDialkylamines
Alternative Parents
Substituents
  • Secondary aliphatic amine
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Hydrochloride
  • Aliphatic homomonocyclic compound
Molecular FrameworkAliphatic homomonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
DispositionNot Available
Process
Naturally occurring process
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.26 g/lALOGPS
LogP3.85ALOGPS
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP3.85ALOGPS
logP2.54ChemAxon
logS-3.6ALOGPS
pKa (Strongest Acidic)0.82ChemAxon
pKa (Strongest Basic)4.01ChemAxon
Physiological Charge-4ChemAxon
Hydrogen Acceptor Count17ChemAxon
Hydrogen Donor Count9ChemAxon
Polar Surface Area363.63 ŲChemAxon
Rotatable Bond Count38ChemAxon
Refractivity266.49 m³·mol⁻¹ChemAxon
Polarizability111.75 ųChemAxon
Number of Rings3ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+285.31430932474
DeepCCS[M-H]-283.5930932474
DeepCCS[M-2H]-317.77130932474
DeepCCS[M+Na]+291.74930932474
AllCCS[M+H]+308.932859911
AllCCS[M+H-H2O]+309.432859911
AllCCS[M+NH4]+308.432859911
AllCCS[M+Na]+308.232859911
AllCCS[M-H]-314.632859911
AllCCS[M+Na-2H]-320.732859911
AllCCS[M+HCOO]-327.232859911

Predicted Kovats Retention Indices

Not Available
Spectra

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 10V, Negative-QTOFsplash10-00lr-9614241500-f0a273e2627591c7d4352017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 20V, Negative-QTOFsplash10-001i-4901120100-2676ae738fac876fd5c72017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 40V, Negative-QTOFsplash10-057i-5900000000-3179a2ac6cbb3a0034112017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 10V, Negative-QTOFsplash10-001i-9000000000-a98f24d670cce76f7c002021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 20V, Negative-QTOFsplash10-001i-9001201300-9bc76b6aa40e4901d0202021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 40V, Negative-QTOFsplash10-004i-9001200200-b6d55b6802f764e985712021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 10V, Positive-QTOFsplash10-00kr-4905410200-6bfcb54b1faf97efc39f2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 20V, Positive-QTOFsplash10-000l-1907320000-5fc731fcb636938f13212017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 40V, Positive-QTOFsplash10-000i-1902200000-ca42a1484720c5b210312017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 10V, Positive-QTOFsplash10-000i-9000000000-ca4a59a5587770efae422021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 20V, Positive-QTOFsplash10-000i-8900100308-eb9902f81c65372277b62021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 13Z,16Z-docosadienoyl-CoA 40V, Positive-QTOFsplash10-004i-0000390000-2ab0810adcb908e6acdf2021-09-23Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDC16645
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound71448927
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.