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Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-03-21 06:14:10 UTC
Update Date2022-03-07 03:17:54 UTC
HMDB IDHMDB0062401
Secondary Accession Numbers
  • HMDB62401
Metabolite Identification
Common Name7alpha,24-dihydroxycholest-4-en-3-one
Description7alpha,24-dihydroxycholest-4-en-3-one, also known as 4-cholesten-7alpha,24-diol-3-one, belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups. Thus, 7alpha,24-dihydroxycholest-4-en-3-one is considered to be a bile acid lipid molecule. 7alpha,24-dihydroxycholest-4-en-3-one is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.
Structure
Data?1563866307
Synonyms
ValueSource
4-Cholesten-7alpha,24-diol-3-oneChEBI
4-Cholesten-7a,24-diol-3-oneGenerator
4-Cholesten-7α,24-diol-3-oneGenerator
7a,24-Dihydroxycholest-4-en-3-oneGenerator
7Α,24-dihydroxycholest-4-en-3-oneGenerator
Chemical FormulaC27H44O3
Average Molecular Weight416.646
Monoisotopic Molecular Weight416.329045277
IUPAC Name(1S,2R,9R,10S,11S,14R,15R)-9-hydroxy-14-[(2R)-5-hydroxy-6-methylheptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one
Traditional Name(1S,2R,9R,10S,11S,14R,15R)-9-hydroxy-14-[(2R)-5-hydroxy-6-methylheptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0^{2,7}.0^{11,15}]heptadec-6-en-5-one
CAS Registry NumberNot Available
SMILES
[H]C(O)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@]([H])(O)CC4=CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C
InChI Identifier
InChI=1S/C27H44O3/c1-16(2)23(29)9-6-17(3)20-7-8-21-25-22(11-13-27(20,21)5)26(4)12-10-19(28)14-18(26)15-24(25)30/h14,16-17,20-25,29-30H,6-13,15H2,1-5H3/t17-,20-,21+,22+,23?,24-,25+,26+,27-/m1/s1
InChI KeyLFFHZNXDGBQZCO-XGEBBOSUSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. Dihydroxy bile acids, alcohols and derivatives are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassSteroids and steroid derivatives
Sub ClassBile acids, alcohols and derivatives
Direct ParentDihydroxy bile acids, alcohols and derivatives
Alternative Parents
Substituents
  • Dihydroxy bile acid, alcohol, or derivatives
  • 24-hydroxysteroid
  • 3-oxo-delta-4-steroid
  • 3-oxosteroid
  • 7-hydroxysteroid
  • Oxosteroid
  • Hydroxysteroid
  • Delta-4-steroid
  • Cyclohexenone
  • Cyclic alcohol
  • Cyclic ketone
  • Secondary alcohol
  • Ketone
  • Organic oxygen compound
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Organooxygen compound
  • Alcohol
  • Aliphatic homopolycyclic compound
Molecular FrameworkAliphatic homopolycyclic compounds
External Descriptors
Ontology
Physiological effect
Disposition
ProcessNot Available
Role
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water Solubility0.0044 g/lALOGPS
LogP4.25ALOGPS
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP4.25ALOGPS
logP5.06ChemAxon
logS-5ALOGPS
pKa (Strongest Acidic)17.14ChemAxon
pKa (Strongest Basic)-0.52ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count3ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area57.53 ŲChemAxon
Rotatable Bond Count5ChemAxon
Refractivity122.75 m³·mol⁻¹ChemAxon
Polarizability50.96 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+201.31431661259
DarkChem[M-H]-194.17231661259
DeepCCS[M-2H]-223.0330932474
DeepCCS[M+Na]+196.80430932474
AllCCS[M+H]+207.632859911
AllCCS[M+H-H2O]+205.632859911
AllCCS[M+NH4]+209.532859911
AllCCS[M+Na]+210.032859911
AllCCS[M-H]-205.932859911
AllCCS[M+Na-2H]-207.832859911
AllCCS[M+HCOO]-210.132859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
7alpha,24-dihydroxycholest-4-en-3-one[H]C(O)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@]([H])(O)CC4=CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C3785.8Standard polar33892256
7alpha,24-dihydroxycholest-4-en-3-one[H]C(O)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@]([H])(O)CC4=CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C3477.6Standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one[H]C(O)(CC[C@@]([H])(C)[C@@]1([H])CC[C@@]2([H])[C@]3([H])[C@]([H])(O)CC4=CC(=O)CC[C@]4(C)[C@@]3([H])CC[C@]12C)C(C)C3740.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
7alpha,24-dihydroxycholest-4-en-3-one,1TMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CCC(=O)C=C1C[C@H]3O)O[Si](C)(C)C3626.1Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,1TMS,isomer #2CC(C)C(O)CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CCC(=O)C=C1C[C@H]3O[Si](C)(C)C3562.1Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,1TMS,isomer #3CC(C)C(O)CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C)C=C1C[C@H]3O3496.4Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,2TMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CCC(=O)C=C1C[C@H]3O[Si](C)(C)C)O[Si](C)(C)C3551.8Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,2TMS,isomer #2CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C)C=C1C[C@H]3O)O[Si](C)(C)C3462.7Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,2TMS,isomer #3CC(C)C(O)CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C)C=C1C[C@H]3O[Si](C)(C)C3396.7Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,3TMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C)C=C1C[C@H]3O[Si](C)(C)C)O[Si](C)(C)C3381.8Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,3TMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C)C=C1C[C@H]3O[Si](C)(C)C)O[Si](C)(C)C3518.6Standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,3TMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C)C=C1C[C@H]3O[Si](C)(C)C)O[Si](C)(C)C3597.8Standard polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,1TBDMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CCC(=O)C=C1C[C@H]3O)O[Si](C)(C)C(C)(C)C3847.2Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,1TBDMS,isomer #2CC(C)C(O)CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CCC(=O)C=C1C[C@H]3O[Si](C)(C)C(C)(C)C3783.4Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,1TBDMS,isomer #3CC(C)C(O)CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C(C)(C)C)C=C1C[C@H]3O3730.1Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,2TBDMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CCC(=O)C=C1C[C@H]3O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3993.7Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,2TBDMS,isomer #2CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C(C)(C)C)C=C1C[C@H]3O)O[Si](C)(C)C(C)(C)C3933.5Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,2TBDMS,isomer #3CC(C)C(O)CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C(C)(C)C)C=C1C[C@H]3O[Si](C)(C)C(C)(C)C3825.7Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,3TBDMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C(C)(C)C)C=C1C[C@H]3O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C4033.2Semi standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,3TBDMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C(C)(C)C)C=C1C[C@H]3O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C4134.6Standard non polar33892256
7alpha,24-dihydroxycholest-4-en-3-one,3TBDMS,isomer #1CC(C)C(CC[C@@H](C)[C@H]1CC[C@H]2[C@H]3[C@H](CC[C@@]21C)[C@@]1(C)CC=C(O[Si](C)(C)C(C)(C)C)C=C1C[C@H]3O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C3806.5Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one GC-MS (Non-derivatized) - 70eV, Positivesplash10-0udv-2349200000-b3b01587fe1af9b630b92017-09-20Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one GC-MS (2 TMS) - 70eV, Positivesplash10-0002-3212090000-c1d0d34e656d7da400cb2017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 10V, Positive-QTOFsplash10-00kb-0009200000-4cf75e191b124774d2ad2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 20V, Positive-QTOFsplash10-007k-3109100000-c6286fa0dc6f3f0ea5bf2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 40V, Positive-QTOFsplash10-076r-4129000000-9bec2ca68ef0c19288df2017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 10V, Negative-QTOFsplash10-014i-0004900000-1b4a764d3fd2c8b8c7542017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 20V, Negative-QTOFsplash10-014j-0009600000-a0c11967d82e82fe79582017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 40V, Negative-QTOFsplash10-0072-6009000000-4634671937f1356686f72017-10-06Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 10V, Positive-QTOFsplash10-0002-0009100000-6458acf0a4c3b215ac4e2021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 20V, Positive-QTOFsplash10-06si-5539000000-9b2d7554d9a953a5ab202021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 40V, Positive-QTOFsplash10-0041-9782000000-be7620b91ae22f9079032021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 10V, Negative-QTOFsplash10-014i-0001900000-9ab766038edb4362fba92021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 20V, Negative-QTOFsplash10-014j-1005900000-c1103d7035c5349e17542021-09-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 7alpha,24-dihydroxycholest-4-en-3-one 40V, Negative-QTOFsplash10-03di-0003900000-73b052937bf5a16c3edb2021-09-22Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDC17331
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound24755589
PDB IDNot Available
ChEBI ID48701
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Simons K, Toomre D: Lipid rafts and signal transduction. Nat Rev Mol Cell Biol. 2000 Oct;1(1):31-9. [PubMed:11413487 ]
  2. Watson AD: Thematic review series: systems biology approaches to metabolic and cardiovascular disorders. Lipidomics: a global approach to lipid analysis in biological systems. J Lipid Res. 2006 Oct;47(10):2101-11. Epub 2006 Aug 10. [PubMed:16902246 ]
  3. Sethi JK, Vidal-Puig AJ: Thematic review series: adipocyte biology. Adipose tissue function and plasticity orchestrate nutritional adaptation. J Lipid Res. 2007 Jun;48(6):1253-62. Epub 2007 Mar 20. [PubMed:17374880 ]
  4. Lingwood D, Simons K: Lipid rafts as a membrane-organizing principle. Science. 2010 Jan 1;327(5961):46-50. doi: 10.1126/science.1174621. [PubMed:20044567 ]
  5. Gunstone, Frank D., John L. Harwood, and Albert J. Dijkstra (2007). The lipid handbook with CD-ROM. CRC Press.