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Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References enzymes (3) Show 3 proteins XML

Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2005-11-16 15:48:42 UTC

Update Date

2022-03-07 02:49:08 UTC

HMDB ID

HMDB0001057

Secondary Accession Numbers

HMDB01057

Metabolite Identification

Common Name

3-Methylglutaconyl-CoA

Description

trans-3-methylglutaconyl-CoA belongs to the class of organic compounds known as acyl coas. These are organic compounds containing a coenzyme A substructure linked to an acyl chain. Thus, trans-3-methylglutaconyl-CoA is considered to be a fatty ester lipid molecule. trans-3-methylglutaconyl-CoA is a very hydrophobic molecule, practically insoluble (in water), and relatively neutral.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1652306232019142D          

 57 59  0  0  1  0            999 V2000
   27.9058   -2.4782    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   27.2384   -1.9933    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.6509   -3.2628    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   26.5709   -2.4782    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   26.8259   -3.2628    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   28.1358   -3.9303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.1601   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9029   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4456   -6.9317    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.7312   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.0167   -6.9317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.4740   -5.2817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.7312   -5.6942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4740   -4.4567    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.0451   -4.4567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.7595   -4.0441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.1885   -3.2191    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0615   -2.0922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4740   -2.8066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.8865   -2.0922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.7595   -3.2191    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   19.0450   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.9029   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.5529   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.2029   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7279   -1.9816    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7279   -3.6316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3779   -1.9816    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3779   -3.6316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7279   -2.8066    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   24.3779   -2.8066    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   25.7863   -2.2233    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.3409   -3.9303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.5158   -4.7553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.1659   -4.7553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.3409   -4.7553    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   26.3409   -5.5803    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.6904   -2.2233    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   29.3036   -2.7753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.0260   -1.4696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.0180   -2.3628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.3036   -3.6003    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   29.8465   -1.5558    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   30.7325   -2.7751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.0181   -4.0127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.7325   -3.6002    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   31.4469   -2.3626    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   22.6174   -6.5192    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   25.4752   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.0463   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.1896   -7.7567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.1896   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9042   -6.5192    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.3318   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3318   -7.7567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.7608   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.7608   -7.7567    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1 38  1  1  0  0  0
  2  1  1  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  1  0  0  0  0
  3  6  1  6  0  0  0
  4 32  1  1  0  0  0
  5  4  1  0  0  0  0
  5 33  1  6  0  0  0
  9  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8 48  1  0  0  0  0
 10  9  1  0  0  0  0
 13 10  1  0  0  0  0
 10 11  2  0  0  0  0
 12 14  1  0  0  0  0
 13 12  1  0  0  0  0
 16 14  1  0  0  0  0
 16 15  2  0  0  0  0
 16 21  1  0  0  0  0
 19 17  1  0  0  0  0
 17 23  1  0  0  0  0
 19 18  1  0  0  0  0
 21 19  1  0  0  0  0
 19 20  1  0  0  0  0
 21 22  1  6  0  0  0
 23 30  1  0  0  0  0
 30 24  1  0  0  0  0
 24 31  1  0  0  0  0
 31 25  1  0  0  0  0
 32 25  1  0  0  0  0
 30 26  2  0  0  0  0
 30 27  1  0  0  0  0
 31 28  2  0  0  0  0
 31 29  1  0  0  0  0
 33 36  1  0  0  0  0
 36 34  1  0  0  0  0
 36 35  1  0  0  0  0
 36 37  2  0  0  0  0
 39 38  1  0  0  0  0
 40 38  1  0  0  0  0
 41 39  2  0  0  0  0
 42 39  1  0  0  0  0
 43 40  2  0  0  0  0
 44 41  1  0  0  0  0
 43 41  1  0  0  0  0
 45 42  2  0  0  0  0
 46 44  2  0  0  0  0
 47 44  1  0  0  0  0
 46 45  1  0  0  0  0
 48 54  1  0  0  0  0
 54 50  1  0  0  0  0
 50 56  1  0  0  0  0
 56 49  2  0  0  0  0
 49 52  1  0  0  0  0
 52 51  2  0  0  0  0
 52 53  1  0  0  0  0
 54 55  2  0  0  0  0
 56 57  1  0  0  0  0
M  END

HMDB0001057
     RDKit          3D
3-Methylglutaconyl-CoA
 99101  0  0  0  0  0  0  0  0999 V2000
   12.2002   -1.1711   -1.3246 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8131   -1.6830    0.0018 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5059   -2.6503    0.5659 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6686   -3.2856   -0.0279 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2548   -4.2010    0.5861 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1649   -2.9204   -1.2552 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6259   -1.0552    0.6834 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4043   -1.2434   -0.1212 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4830   -1.9122   -1.1385 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8601   -0.5279    0.3519 S   0  0  0  0  0  0  0  0  0  0  0  0
    8.0543    0.8630    1.5238 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6189    2.0443    0.7452 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6263    2.3490   -0.3012 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.3191    2.7917    0.0485 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0255    2.9361    1.2512 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3060    3.0842   -0.9724 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0760    3.7255   -0.4220 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3626    2.9979    0.5686 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.7740    1.7304    0.4444 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8511    1.0842   -0.6230 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0300    1.0847    1.5695 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7956   -0.2724    1.2731 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6579    1.6988    1.7601 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7161    3.1696    2.0501 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0940    1.0421    3.0482 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3184    1.3288    0.6792 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5145   -0.0658    0.6370 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6387   -0.4442   -0.5665 P   0  0  0  0  0  5  0  0  0  0  0  0
   -2.1255   -1.8645   -0.3709 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8218   -0.4109   -2.0541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8858    0.6774   -0.4914 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1689    0.2032    0.4813 P   0  0  0  0  0  5  0  0  0  0  0  0
   -3.7876   -0.8982    1.4576 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5993    1.5531    1.4469 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5037   -0.3465   -0.3844 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3938    0.0165   -1.7243 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5676   -0.4522   -2.5322 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.7557   -1.8042   -2.5404 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1170   -2.0854   -2.5207 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.4097   -2.8299   -1.3377 N   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5178   -3.6067   -0.6942 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0837   -4.1708    0.3662 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3576   -3.7762    0.4408 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3903   -4.0402    1.3120 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1187   -4.9108    2.3902 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6054   -3.4654    1.1038 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8084   -2.6297    0.0405 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7640   -2.4047   -0.7813 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5494   -2.9363   -0.6334 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8618   -0.7906   -2.6715 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.9612   -0.5408   -4.0605 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8589    0.1948   -2.0988 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.0220    1.4812   -2.6152 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3118    2.5288   -1.2889 P   0  0  0  0  0  5  0  0  0  0  0  0
   -7.6409    3.8593   -1.5249 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9702    2.6720   -1.0814 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6858    1.8008    0.1169 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.2180   -0.7191   -1.2651 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4583   -0.4251   -1.6957 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.2484   -1.9817   -2.0840 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.1869   -3.0040    1.5577 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.0016   -2.3458   -1.3532 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8698   -0.0141    0.8349 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.5230   -1.6083    1.6656 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0739    1.0626    1.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.8034    0.5349    2.2626 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7393    2.8695    1.4436 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5449    1.7188    0.2503 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8992    2.2314   -1.3064 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7213    3.7921   -1.7417 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9949    2.1896   -1.5473 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3711    4.7497   -0.0831 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3952    3.9038   -1.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2829    3.4770    1.5259 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5968    1.1475    2.4989 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1172   -0.8589    1.9893 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3796    3.3527    2.9068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3224    3.4801    2.3970 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9859    3.7771    1.1593 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3973   -0.0386    2.9774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0050    1.0880    2.9709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5131    1.5553    3.9164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1129    1.6807   -0.3025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2891    1.8419    0.7861 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2990   -1.2656   -2.0984 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3591    2.3920    0.9878 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3117    1.1226   -1.8450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4564   -0.4495   -2.1039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3859   -0.1283   -3.5915 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3072   -2.7300   -3.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4704   -3.7747   -0.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3474   -4.6278    3.3466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6874   -5.8325    2.2116 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7835   -2.1821   -0.1091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8289   -0.7332   -2.1832 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2665   -1.0563   -4.5669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9838    0.1804   -0.9955 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3373    1.9394   -0.5233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1663    2.1678    0.8942 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  2  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 23 25  1  0
 23 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  2  0
 28 30  1  0
 28 31  1  0
 31 32  1  0
 32 33  2  0
 32 34  1  0
 32 35  1  0
 35 36  1  0
 36 37  1  0
 37 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  2  0
 42 43  1  0
 43 44  2  0
 44 45  1  0
 44 46  1  0
 46 47  2  0
 47 48  1  0
 48 49  2  0
 39 50  1  0
 50 51  1  0
 50 52  1  0
 52 53  1  0
 53 54  1  0
 54 55  2  0
 54 56  1  0
 54 57  1  0
 52 37  1  0
 49 40  1  0
 49 43  1  0
  1 58  1  0
  1 59  1  0
  1 60  1  0
  3 61  1  0
  6 62  1  0
  7 63  1  0
  7 64  1  0
 11 65  1  0
 11 66  1  0
 12 67  1  0
 12 68  1  0
 13 69  1  0
 16 70  1  0
 16 71  1  0
 17 72  1  0
 17 73  1  0
 18 74  1  0
 21 75  1  1
 22 76  1  0
 24 77  1  0
 24 78  1  0
 24 79  1  0
 25 80  1  0
 25 81  1  0
 25 82  1  0
 26 83  1  0
 26 84  1  0
 30 85  1  0
 34 86  1  0
 36 87  1  0
 36 88  1  0
 37 89  1  6
 39 90  1  6
 41 91  1  0
 45 92  1  0
 45 93  1  0
 47 94  1  0
 50 95  1  1
 51 96  1  0
 52 97  1  1
 56 98  1  0
 57 99  1  0
M  END


  Mrv1652306232019142D          

 57 59  0  0  1  0            999 V2000
   27.9058   -2.4782    0.0000 C   0  0  2  0  0  0  0  0  0  0  0  0
   27.2384   -1.9933    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.6509   -3.2628    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   26.5709   -2.4782    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   26.8259   -3.2628    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   28.1358   -3.9303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.1601   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9029   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4456   -6.9317    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.7312   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.0167   -6.9317    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.4740   -5.2817    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.7312   -5.6942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4740   -4.4567    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.0451   -4.4567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.7595   -4.0441    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.1885   -3.2191    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.0615   -2.0922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.4740   -2.8066    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.8865   -2.0922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.7595   -3.2191    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   19.0450   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.9029   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.5529   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.2029   -2.8066    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7279   -1.9816    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7279   -3.6316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3779   -1.9816    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3779   -3.6316    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.7279   -2.8066    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   24.3779   -2.8066    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   25.7863   -2.2233    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.3409   -3.9303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   25.5158   -4.7553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   27.1659   -4.7553    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.3409   -4.7553    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   26.3409   -5.5803    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.6904   -2.2233    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   29.3036   -2.7753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.0260   -1.4696    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.0180   -2.3628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.3036   -3.6003    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   29.8465   -1.5558    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   30.7325   -2.7751    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.0181   -4.0127    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.7325   -3.6002    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   31.4469   -2.3626    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   22.6174   -6.5192    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   25.4752   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.0463   -6.5192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.1896   -7.7567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.1896   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9042   -6.5192    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   23.3318   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3318   -7.7567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.7608   -6.9317    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.7608   -7.7567    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1 38  1  1  0  0  0
  2  1  1  0  0  0  0
  3  1  1  0  0  0  0
  4  2  1  0  0  0  0
  5  3  1  0  0  0  0
  3  6  1  6  0  0  0
  4 32  1  1  0  0  0
  5  4  1  0  0  0  0
  5 33  1  6  0  0  0
  9  7  1  0  0  0  0
  7  8  1  0  0  0  0
  8 48  1  0  0  0  0
 10  9  1  0  0  0  0
 13 10  1  0  0  0  0
 10 11  2  0  0  0  0
 12 14  1  0  0  0  0
 13 12  1  0  0  0  0
 16 14  1  0  0  0  0
 16 15  2  0  0  0  0
 16 21  1  0  0  0  0
 19 17  1  0  0  0  0
 17 23  1  0  0  0  0
 19 18  1  0  0  0  0
 21 19  1  0  0  0  0
 19 20  1  0  0  0  0
 21 22  1  6  0  0  0
 23 30  1  0  0  0  0
 30 24  1  0  0  0  0
 24 31  1  0  0  0  0
 31 25  1  0  0  0  0
 32 25  1  0  0  0  0
 30 26  2  0  0  0  0
 30 27  1  0  0  0  0
 31 28  2  0  0  0  0
 31 29  1  0  0  0  0
 33 36  1  0  0  0  0
 36 34  1  0  0  0  0
 36 35  1  0  0  0  0
 36 37  2  0  0  0  0
 39 38  1  0  0  0  0
 40 38  1  0  0  0  0
 41 39  2  0  0  0  0
 42 39  1  0  0  0  0
 43 40  2  0  0  0  0
 44 41  1  0  0  0  0
 43 41  1  0  0  0  0
 45 42  2  0  0  0  0
 46 44  2  0  0  0  0
 47 44  1  0  0  0  0
 46 45  1  0  0  0  0
 48 54  1  0  0  0  0
 54 50  1  0  0  0  0
 50 56  1  0  0  0  0
 56 49  2  0  0  0  0
 49 52  1  0  0  0  0
 52 51  2  0  0  0  0
 52 53  1  0  0  0  0
 54 55  2  0  0  0  0
 56 57  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0001057

> <DATABASE_NAME>
hmdb

> <SMILES>
C\C(CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N)=C/C(O)=O

> <INCHI_IDENTIFIER>
InChI=1S/C27H42N7O19P3S/c1-14(8-17(36)37)9-18(38)57-7-6-29-16(35)4-5-30-25(41)22(40)27(2,3)11-50-56(47,48)53-55(45,46)49-10-15-21(52-54(42,43)44)20(39)26(51-15)34-13-33-19-23(28)31-12-32-24(19)34/h8,12-13,15,20-22,26,39-40H,4-7,9-11H2,1-3H3,(H,29,35)(H,30,41)(H,36,37)(H,45,46)(H,47,48)(H2,28,31,32)(H2,42,43,44)/b14-8+/t15-,20-,21-,22+,26-/m1/s1

> <INCHI_KEY>
ZMMFWDHIXCPOHZ-XRYKKJIBSA-N

> <FORMULA>
C27H42N7O19P3S

> <MOLECULAR_WEIGHT>
893.64

> <EXACT_MASS>
893.146904328

> <JCHEM_ACCEPTOR_COUNT>
19

> <JCHEM_ATOM_COUNT>
99

> <JCHEM_AVERAGE_POLARIZABILITY>
80.15672108827368

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
10

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2E)-5-[(2-{3-[(2R)-3-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-2-hydroxy-3-methylbutanamido]propanamido}ethyl)sulfanyl]-3-methyl-5-oxopent-2-enoic acid

> <ALOGPS_LOGP>
-0.45

> <JCHEM_LOGP>
-5.371094233420126

> <ALOGPS_LOGS>
-2.44

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
-5

> <JCHEM_PKA>
1.8988234498600307

> <JCHEM_PKA_STRONGEST_ACIDIC>
0.820860806439863

> <JCHEM_PKA_STRONGEST_BASIC>
3.8818875323259987

> <JCHEM_POLAR_SURFACE_AREA>
400.9299999999999

> <JCHEM_REFRACTIVITY>
193.07760000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
23

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.23e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
trans-3-methylglutaconyl-coa

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0001057
     RDKit          3D
3-Methylglutaconyl-CoA
 99101  0  0  0  0  0  0  0  0999 V2000
   12.2002   -1.1711   -1.3246 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8131   -1.6830    0.0018 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5059   -2.6503    0.5659 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6686   -3.2856   -0.0279 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2548   -4.2010    0.5861 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1649   -2.9204   -1.2552 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6259   -1.0552    0.6834 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4043   -1.2434   -0.1212 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4830   -1.9122   -1.1385 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8601   -0.5279    0.3519 S   0  0  0  0  0  0  0  0  0  0  0  0
    8.0543    0.8630    1.5238 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6189    2.0443    0.7452 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6263    2.3490   -0.3012 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.3191    2.7917    0.0485 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0255    2.9361    1.2512 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3060    3.0842   -0.9724 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0760    3.7255   -0.4220 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3626    2.9979    0.5686 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.7740    1.7304    0.4444 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8511    1.0842   -0.6230 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0300    1.0847    1.5695 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7956   -0.2724    1.2731 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6579    1.6988    1.7601 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7161    3.1696    2.0501 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0940    1.0421    3.0482 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3184    1.3288    0.6792 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5145   -0.0658    0.6370 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6387   -0.4442   -0.5665 P   0  0  0  0  0  5  0  0  0  0  0  0
   -2.1255   -1.8645   -0.3709 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8218   -0.4109   -2.0541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8858    0.6774   -0.4914 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1689    0.2032    0.4813 P   0  0  0  0  0  5  0  0  0  0  0  0
   -3.7876   -0.8982    1.4576 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5993    1.5531    1.4469 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5037   -0.3465   -0.3844 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3938    0.0165   -1.7243 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5676   -0.4522   -2.5322 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.7557   -1.8042   -2.5404 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1170   -2.0854   -2.5207 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.4097   -2.8299   -1.3377 N   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5178   -3.6067   -0.6942 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0837   -4.1708    0.3662 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3576   -3.7762    0.4408 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3903   -4.0402    1.3120 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1187   -4.9108    2.3902 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6054   -3.4654    1.1038 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8084   -2.6297    0.0405 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7640   -2.4047   -0.7813 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5494   -2.9363   -0.6334 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8618   -0.7906   -2.6715 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.9612   -0.5408   -4.0605 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8589    0.1948   -2.0988 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.0220    1.4812   -2.6152 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3118    2.5288   -1.2889 P   0  0  0  0  0  5  0  0  0  0  0  0
   -7.6409    3.8593   -1.5249 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9702    2.6720   -1.0814 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6858    1.8008    0.1169 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.2180   -0.7191   -1.2651 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4583   -0.4251   -1.6957 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.2484   -1.9817   -2.0840 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.1869   -3.0040    1.5577 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.0016   -2.3458   -1.3532 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8698   -0.0141    0.8349 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.5230   -1.6083    1.6656 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0739    1.0626    1.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.8034    0.5349    2.2626 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7393    2.8695    1.4436 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5449    1.7188    0.2503 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8992    2.2314   -1.3064 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7213    3.7921   -1.7417 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9949    2.1896   -1.5473 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3711    4.7497   -0.0831 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3952    3.9038   -1.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2829    3.4770    1.5259 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5968    1.1475    2.4989 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1172   -0.8589    1.9893 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3796    3.3527    2.9068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3224    3.4801    2.3970 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9859    3.7771    1.1593 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3973   -0.0386    2.9774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0050    1.0880    2.9709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5131    1.5553    3.9164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1129    1.6807   -0.3025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2891    1.8419    0.7861 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2990   -1.2656   -2.0984 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3591    2.3920    0.9878 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3117    1.1226   -1.8450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4564   -0.4495   -2.1039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3859   -0.1283   -3.5915 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3072   -2.7300   -3.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4704   -3.7747   -0.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3474   -4.6278    3.3466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6874   -5.8325    2.2116 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7835   -2.1821   -0.1091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8289   -0.7332   -2.1832 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2665   -1.0563   -4.5669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9838    0.1804   -0.9955 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3373    1.9394   -0.5233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1663    2.1678    0.8942 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  2  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
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 39 40  1  0
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 46 47  2  0
 47 48  1  0
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 39 50  1  0
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 37 89  1  6
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 52 97  1  1
 56 98  1  0
 57 99  1  0
M  END

HEADER    PROTEIN                                 23-JUN-20   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   23-JUN-20         0                                  
HETATM    1  C   UNK     0      52.091  -4.626   0.000  0.00  0.00           C+0
HETATM    2  O   UNK     0      50.845  -3.721   0.000  0.00  0.00           O+0
HETATM    3  C   UNK     0      51.615  -6.091   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      49.599  -4.626   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      50.075  -6.091   0.000  0.00  0.00           C+0
HETATM    6  O   UNK     0      52.520  -7.337   0.000  0.00  0.00           O+0
HETATM    7  C   UNK     0      39.499 -12.169   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      40.885 -12.939   0.000  0.00  0.00           C+0
HETATM    9  N   UNK     0      38.165 -12.939   0.000  0.00  0.00           N+0
HETATM   10  C   UNK     0      36.832 -12.169   0.000  0.00  0.00           C+0
HETATM   11  O   UNK     0      35.498 -12.939   0.000  0.00  0.00           O+0
HETATM   12  C   UNK     0      38.218  -9.859   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0      36.832 -10.629   0.000  0.00  0.00           C+0
HETATM   14  N   UNK     0      38.218  -8.319   0.000  0.00  0.00           N+0
HETATM   15  O   UNK     0      35.551  -8.319   0.000  0.00  0.00           O+0
HETATM   16  C   UNK     0      36.884  -7.549   0.000  0.00  0.00           C+0
HETATM   17  C   UNK     0      39.552  -6.009   0.000  0.00  0.00           C+0
HETATM   18  C   UNK     0      37.448  -3.905   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      38.218  -5.239   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      38.988  -3.905   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      36.884  -6.009   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0      35.551  -5.239   0.000  0.00  0.00           O+0
HETATM   23  O   UNK     0      40.885  -5.239   0.000  0.00  0.00           O+0
HETATM   24  O   UNK     0      43.965  -5.239   0.000  0.00  0.00           O+0
HETATM   25  O   UNK     0      47.045  -5.239   0.000  0.00  0.00           O+0
HETATM   26  O   UNK     0      42.425  -3.699   0.000  0.00  0.00           O+0
HETATM   27  O   UNK     0      42.425  -6.779   0.000  0.00  0.00           O+0
HETATM   28  O   UNK     0      45.505  -3.699   0.000  0.00  0.00           O+0
HETATM   29  O   UNK     0      45.505  -6.779   0.000  0.00  0.00           O+0
HETATM   30  P   UNK     0      42.425  -5.239   0.000  0.00  0.00           P+0
HETATM   31  P   UNK     0      45.505  -5.239   0.000  0.00  0.00           P+0
HETATM   32  C   UNK     0      48.134  -4.150   0.000  0.00  0.00           C+0
HETATM   33  O   UNK     0      49.170  -7.337   0.000  0.00  0.00           O+0
HETATM   34  O   UNK     0      47.629  -8.877   0.000  0.00  0.00           O+0
HETATM   35  O   UNK     0      50.710  -8.877   0.000  0.00  0.00           O+0
HETATM   36  P   UNK     0      49.170  -8.877   0.000  0.00  0.00           P+0
HETATM   37  O   UNK     0      49.170 -10.417   0.000  0.00  0.00           O+0
HETATM   38  N   UNK     0      53.555  -4.150   0.000  0.00  0.00           N+0
HETATM   39  C   UNK     0      54.700  -5.181   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      54.182  -2.743   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      56.034  -4.411   0.000  0.00  0.00           C+0
HETATM   42  N   UNK     0      54.700  -6.721   0.000  0.00  0.00           N+0
HETATM   43  N   UNK     0      55.713  -2.904   0.000  0.00  0.00           N+0
HETATM   44  C   UNK     0      57.367  -5.180   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      56.034  -7.490   0.000  0.00  0.00           C+0
HETATM   46  N   UNK     0      57.367  -6.720   0.000  0.00  0.00           N+0
HETATM   47  N   UNK     0      58.701  -4.410   0.000  0.00  0.00           N+0
HETATM   48  S   UNK     0      42.219 -12.169   0.000  0.00  0.00           S+0
HETATM   49  C   UNK     0      47.554 -12.169   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      44.886 -12.169   0.000  0.00  0.00           C+0
HETATM   51  O   UNK     0      48.887 -14.479   0.000  0.00  0.00           O+0
HETATM   52  C   UNK     0      48.887 -12.939   0.000  0.00  0.00           C+0
HETATM   53  O   UNK     0      50.221 -12.169   0.000  0.00  0.00           O+0
HETATM   54  C   UNK     0      43.553 -12.939   0.000  0.00  0.00           C+0
HETATM   55  O   UNK     0      43.553 -14.479   0.000  0.00  0.00           O+0
HETATM   56  C   UNK     0      46.220 -12.939   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      46.220 -14.479   0.000  0.00  0.00           C+0
CONECT    1   38    2    3                                                  
CONECT    2    1    4                                                       
CONECT    3    1    5    6                                                  
CONECT    4    2   32    5                                                  
CONECT    5    3    4   33                                                  
CONECT    6    3                                                            
CONECT    7    9    8                                                       
CONECT    8    7   48                                                       
CONECT    9    7   10                                                       
CONECT   10    9   13   11                                                  
CONECT   11   10                                                            
CONECT   12   14   13                                                       
CONECT   13   10   12                                                       
CONECT   14   12   16                                                       
CONECT   15   16                                                            
CONECT   16   14   15   21                                                  
CONECT   17   19   23                                                       
CONECT   18   19                                                            
CONECT   19   17   18   21   20                                             
CONECT   20   19                                                            
CONECT   21   16   19   22                                                  
CONECT   22   21                                                            
CONECT   23   17   30                                                       
CONECT   24   30   31                                                       
CONECT   25   31   32                                                       
CONECT   26   30                                                            
CONECT   27   30                                                            
CONECT   28   31                                                            
CONECT   29   31                                                            
CONECT   30   23   24   26   27                                             
CONECT   31   24   25   28   29                                             
CONECT   32    4   25                                                       
CONECT   33    5   36                                                       
CONECT   34   36                                                            
CONECT   35   36                                                            
CONECT   36   33   34   35   37                                             
CONECT   37   36                                                            
CONECT   38    1   39   40                                                  
CONECT   39   38   41   42                                                  
CONECT   40   38   43                                                       
CONECT   41   39   44   43                                                  
CONECT   42   39   45                                                       
CONECT   43   40   41                                                       
CONECT   44   41   46   47                                                  
CONECT   45   42   46                                                       
CONECT   46   44   45                                                       
CONECT   47   44                                                            
CONECT   48    8   54                                                       
CONECT   49   56   52                                                       
CONECT   50   54   56                                                       
CONECT   51   52                                                            
CONECT   52   49   51   53                                                  
CONECT   53   52                                                            
CONECT   54   48   50   55                                                  
CONECT   55   54                                                            
CONECT   56   50   49   57                                                  
CONECT   57   56                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  118    0
END

COMPND    HMDB0001057
HETATM    1  C1  UNL     1      12.200  -1.171  -1.325  1.00  0.00           C  
HETATM    2  C2  UNL     1      11.813  -1.683   0.002  1.00  0.00           C  
HETATM    3  C3  UNL     1      12.506  -2.650   0.566  1.00  0.00           C  
HETATM    4  C4  UNL     1      13.669  -3.286  -0.028  1.00  0.00           C  
HETATM    5  O1  UNL     1      14.255  -4.201   0.586  1.00  0.00           O  
HETATM    6  O2  UNL     1      14.165  -2.920  -1.255  1.00  0.00           O  
HETATM    7  C5  UNL     1      10.626  -1.055   0.683  1.00  0.00           C  
HETATM    8  C6  UNL     1       9.404  -1.243  -0.121  1.00  0.00           C  
HETATM    9  O3  UNL     1       9.483  -1.912  -1.139  1.00  0.00           O  
HETATM   10  S1  UNL     1       7.860  -0.528   0.352  1.00  0.00           S  
HETATM   11  C7  UNL     1       8.054   0.863   1.524  1.00  0.00           C  
HETATM   12  C8  UNL     1       8.619   2.044   0.745  1.00  0.00           C  
HETATM   13  N1  UNL     1       7.626   2.349  -0.301  1.00  0.00           N  
HETATM   14  C9  UNL     1       6.319   2.792   0.049  1.00  0.00           C  
HETATM   15  O4  UNL     1       6.025   2.936   1.251  1.00  0.00           O  
HETATM   16  C10 UNL     1       5.306   3.084  -0.972  1.00  0.00           C  
HETATM   17  C11 UNL     1       4.076   3.726  -0.422  1.00  0.00           C  
HETATM   18  N2  UNL     1       3.363   2.998   0.569  1.00  0.00           N  
HETATM   19  C12 UNL     1       2.774   1.730   0.444  1.00  0.00           C  
HETATM   20  O5  UNL     1       2.851   1.084  -0.623  1.00  0.00           O  
HETATM   21  C13 UNL     1       2.030   1.085   1.570  1.00  0.00           C  
HETATM   22  O6  UNL     1       1.796  -0.272   1.273  1.00  0.00           O  
HETATM   23  C14 UNL     1       0.658   1.699   1.760  1.00  0.00           C  
HETATM   24  C15 UNL     1       0.716   3.170   2.050  1.00  0.00           C  
HETATM   25  C16 UNL     1       0.094   1.042   3.048  1.00  0.00           C  
HETATM   26  C17 UNL     1      -0.318   1.329   0.679  1.00  0.00           C  
HETATM   27  O7  UNL     1      -0.514  -0.066   0.637  1.00  0.00           O  
HETATM   28  P1  UNL     1      -1.639  -0.444  -0.567  1.00  0.00           P  
HETATM   29  O8  UNL     1      -2.125  -1.864  -0.371  1.00  0.00           O  
HETATM   30  O9  UNL     1      -0.822  -0.411  -2.054  1.00  0.00           O  
HETATM   31  O10 UNL     1      -2.886   0.677  -0.491  1.00  0.00           O  
HETATM   32  P2  UNL     1      -4.169   0.203   0.481  1.00  0.00           P  
HETATM   33  O11 UNL     1      -3.788  -0.898   1.458  1.00  0.00           O  
HETATM   34  O12 UNL     1      -4.599   1.553   1.447  1.00  0.00           O  
HETATM   35  O13 UNL     1      -5.504  -0.347  -0.384  1.00  0.00           O  
HETATM   36  C18 UNL     1      -5.394   0.017  -1.724  1.00  0.00           C  
HETATM   37  C19 UNL     1      -6.568  -0.452  -2.532  1.00  0.00           C  
HETATM   38  O14 UNL     1      -6.756  -1.804  -2.540  1.00  0.00           O  
HETATM   39  C20 UNL     1      -8.117  -2.085  -2.521  1.00  0.00           C  
HETATM   40  N3  UNL     1      -8.410  -2.830  -1.338  1.00  0.00           N  
HETATM   41  C21 UNL     1      -7.518  -3.607  -0.694  1.00  0.00           C  
HETATM   42  N4  UNL     1      -8.084  -4.171   0.366  1.00  0.00           N  
HETATM   43  C22 UNL     1      -9.358  -3.776   0.441  1.00  0.00           C  
HETATM   44  C23 UNL     1     -10.390  -4.040   1.312  1.00  0.00           C  
HETATM   45  N5  UNL     1     -10.119  -4.911   2.390  1.00  0.00           N  
HETATM   46  N6  UNL     1     -11.605  -3.465   1.104  1.00  0.00           N  
HETATM   47  C24 UNL     1     -11.808  -2.630   0.040  1.00  0.00           C  
HETATM   48  N7  UNL     1     -10.764  -2.405  -0.781  1.00  0.00           N  
HETATM   49  C25 UNL     1      -9.549  -2.936  -0.633  1.00  0.00           C  
HETATM   50  C26 UNL     1      -8.862  -0.791  -2.671  1.00  0.00           C  
HETATM   51  O15 UNL     1      -8.961  -0.541  -4.061  1.00  0.00           O  
HETATM   52  C27 UNL     1      -7.859   0.195  -2.099  1.00  0.00           C  
HETATM   53  O16 UNL     1      -8.022   1.481  -2.615  1.00  0.00           O  
HETATM   54  P3  UNL     1      -8.312   2.529  -1.289  1.00  0.00           P  
HETATM   55  O17 UNL     1      -7.641   3.859  -1.525  1.00  0.00           O  
HETATM   56  O18 UNL     1      -9.970   2.672  -1.081  1.00  0.00           O  
HETATM   57  O19 UNL     1      -7.686   1.801   0.117  1.00  0.00           O  
HETATM   58  H1  UNL     1      13.218  -0.719  -1.265  1.00  0.00           H  
HETATM   59  H2  UNL     1      11.458  -0.425  -1.696  1.00  0.00           H  
HETATM   60  H3  UNL     1      12.248  -1.982  -2.084  1.00  0.00           H  
HETATM   61  H4  UNL     1      12.187  -3.004   1.558  1.00  0.00           H  
HETATM   62  H5  UNL     1      15.002  -2.346  -1.353  1.00  0.00           H  
HETATM   63  H6  UNL     1      10.870  -0.014   0.835  1.00  0.00           H  
HETATM   64  H7  UNL     1      10.523  -1.608   1.666  1.00  0.00           H  
HETATM   65  H8  UNL     1       7.074   1.063   1.964  1.00  0.00           H  
HETATM   66  H9  UNL     1       8.803   0.535   2.263  1.00  0.00           H  
HETATM   67  H10 UNL     1       8.739   2.870   1.444  1.00  0.00           H  
HETATM   68  H11 UNL     1       9.545   1.719   0.250  1.00  0.00           H  
HETATM   69  H12 UNL     1       7.899   2.231  -1.306  1.00  0.00           H  
HETATM   70  H13 UNL     1       5.721   3.792  -1.742  1.00  0.00           H  
HETATM   71  H14 UNL     1       4.995   2.190  -1.547  1.00  0.00           H  
HETATM   72  H15 UNL     1       4.371   4.750  -0.083  1.00  0.00           H  
HETATM   73  H16 UNL     1       3.395   3.904  -1.293  1.00  0.00           H  
HETATM   74  H17 UNL     1       3.283   3.477   1.526  1.00  0.00           H  
HETATM   75  H18 UNL     1       2.597   1.147   2.499  1.00  0.00           H  
HETATM   76  H19 UNL     1       2.117  -0.859   1.989  1.00  0.00           H  
HETATM   77  H20 UNL     1       1.380   3.353   2.907  1.00  0.00           H  
HETATM   78  H21 UNL     1      -0.322   3.480   2.397  1.00  0.00           H  
HETATM   79  H22 UNL     1       0.986   3.777   1.159  1.00  0.00           H  
HETATM   80  H23 UNL     1       0.397  -0.039   2.977  1.00  0.00           H  
HETATM   81  H24 UNL     1      -1.005   1.088   2.971  1.00  0.00           H  
HETATM   82  H25 UNL     1       0.513   1.555   3.916  1.00  0.00           H  
HETATM   83  H26 UNL     1       0.113   1.681  -0.302  1.00  0.00           H  
HETATM   84  H27 UNL     1      -1.289   1.842   0.786  1.00  0.00           H  
HETATM   85  H28 UNL     1      -0.299  -1.266  -2.098  1.00  0.00           H  
HETATM   86  H29 UNL     1      -4.359   2.392   0.988  1.00  0.00           H  
HETATM   87  H30 UNL     1      -5.312   1.123  -1.845  1.00  0.00           H  
HETATM   88  H31 UNL     1      -4.456  -0.450  -2.104  1.00  0.00           H  
HETATM   89  H32 UNL     1      -6.386  -0.128  -3.591  1.00  0.00           H  
HETATM   90  H33 UNL     1      -8.307  -2.730  -3.420  1.00  0.00           H  
HETATM   91  H34 UNL     1      -6.470  -3.775  -0.974  1.00  0.00           H  
HETATM   92  H35 UNL     1     -10.347  -4.628   3.347  1.00  0.00           H  
HETATM   93  H36 UNL     1      -9.687  -5.832   2.212  1.00  0.00           H  
HETATM   94  H37 UNL     1     -12.784  -2.182  -0.109  1.00  0.00           H  
HETATM   95  H38 UNL     1      -9.829  -0.733  -2.183  1.00  0.00           H  
HETATM   96  H39 UNL     1      -8.266  -1.056  -4.567  1.00  0.00           H  
HETATM   97  H40 UNL     1      -7.984   0.180  -0.996  1.00  0.00           H  
HETATM   98  H41 UNL     1     -10.337   1.939  -0.523  1.00  0.00           H  
HETATM   99  H42 UNL     1      -8.166   2.168   0.894  1.00  0.00           H  
CONECT    1    2   58   59   60
CONECT    2    3    3    7
CONECT    3    4   61
CONECT    4    5    5    6
CONECT    6   62
CONECT    7    8   63   64
CONECT    8    9    9   10
CONECT   10   11
CONECT   11   12   65   66
CONECT   12   13   67   68
CONECT   13   14   69
CONECT   14   15   15   16
CONECT   16   17   70   71
CONECT   17   18   72   73
CONECT   18   19   74
CONECT   19   20   20   21
CONECT   21   22   23   75
CONECT   22   76
CONECT   23   24   25   26
CONECT   24   77   78   79
CONECT   25   80   81   82
CONECT   26   27   83   84
CONECT   27   28
CONECT   28   29   29   30   31
CONECT   30   85
CONECT   31   32
CONECT   32   33   33   34   35
CONECT   34   86
CONECT   35   36
CONECT   36   37   87   88
CONECT   37   38   52   89
CONECT   38   39
CONECT   39   40   50   90
CONECT   40   41   49
CONECT   41   42   42   91
CONECT   42   43
CONECT   43   44   44   49
CONECT   44   45   46
CONECT   45   92   93
CONECT   46   47   47
CONECT   47   48   94
CONECT   48   49   49
CONECT   50   51   52   95
CONECT   51   96
CONECT   52   53   97
CONECT   53   54
CONECT   54   55   55   56   57
CONECT   56   98
CONECT   57   99
END

HMDB0001057
     RDKit          3D
3-Methylglutaconyl-CoA
 99101  0  0  0  0  0  0  0  0999 V2000
   12.2002   -1.1711   -1.3246 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8131   -1.6830    0.0018 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5059   -2.6503    0.5659 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6686   -3.2856   -0.0279 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2548   -4.2010    0.5861 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1649   -2.9204   -1.2552 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6259   -1.0552    0.6834 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4043   -1.2434   -0.1212 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4830   -1.9122   -1.1385 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8601   -0.5279    0.3519 S   0  0  0  0  0  0  0  0  0  0  0  0
    8.0543    0.8630    1.5238 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6189    2.0443    0.7452 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6263    2.3490   -0.3012 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.3191    2.7917    0.0485 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0255    2.9361    1.2512 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.3060    3.0842   -0.9724 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0760    3.7255   -0.4220 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3626    2.9979    0.5686 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.7740    1.7304    0.4444 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8511    1.0842   -0.6230 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0300    1.0847    1.5695 C   0  0  2  0  0  0  0  0  0  0  0  0
    1.7956   -0.2724    1.2731 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6579    1.6988    1.7601 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7161    3.1696    2.0501 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0940    1.0421    3.0482 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3184    1.3288    0.6792 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5145   -0.0658    0.6370 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6387   -0.4442   -0.5665 P   0  0  0  0  0  5  0  0  0  0  0  0
   -2.1255   -1.8645   -0.3709 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8218   -0.4109   -2.0541 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8858    0.6774   -0.4914 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1689    0.2032    0.4813 P   0  0  0  0  0  5  0  0  0  0  0  0
   -3.7876   -0.8982    1.4576 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5993    1.5531    1.4469 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.5037   -0.3465   -0.3844 O   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3938    0.0165   -1.7243 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5676   -0.4522   -2.5322 C   0  0  1  0  0  0  0  0  0  0  0  0
   -6.7557   -1.8042   -2.5404 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1170   -2.0854   -2.5207 C   0  0  1  0  0  0  0  0  0  0  0  0
   -8.4097   -2.8299   -1.3377 N   0  0  0  0  0  0  0  0  0  0  0  0
   -7.5178   -3.6067   -0.6942 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0837   -4.1708    0.3662 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.3576   -3.7762    0.4408 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3903   -4.0402    1.3120 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1187   -4.9108    2.3902 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.6054   -3.4654    1.1038 N   0  0  0  0  0  0  0  0  0  0  0  0
  -11.8084   -2.6297    0.0405 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.7640   -2.4047   -0.7813 N   0  0  0  0  0  0  0  0  0  0  0  0
   -9.5494   -2.9363   -0.6334 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.8618   -0.7906   -2.6715 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.9612   -0.5408   -4.0605 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.8589    0.1948   -2.0988 C   0  0  2  0  0  0  0  0  0  0  0  0
   -8.0220    1.4812   -2.6152 O   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3118    2.5288   -1.2889 P   0  0  0  0  0  5  0  0  0  0  0  0
   -7.6409    3.8593   -1.5249 O   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9702    2.6720   -1.0814 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6858    1.8008    0.1169 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.2180   -0.7191   -1.2651 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4583   -0.4251   -1.6957 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.2484   -1.9817   -2.0840 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.1869   -3.0040    1.5577 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.0016   -2.3458   -1.3532 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.8698   -0.0141    0.8349 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.5230   -1.6083    1.6656 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.0739    1.0626    1.9644 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.8034    0.5349    2.2626 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7393    2.8695    1.4436 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5449    1.7188    0.2503 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8992    2.2314   -1.3064 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7213    3.7921   -1.7417 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9949    2.1896   -1.5473 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3711    4.7497   -0.0831 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3952    3.9038   -1.2925 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2829    3.4770    1.5259 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5968    1.1475    2.4989 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1172   -0.8589    1.9893 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3796    3.3527    2.9068 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3224    3.4801    2.3970 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9859    3.7771    1.1593 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3973   -0.0386    2.9774 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0050    1.0880    2.9709 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.5131    1.5553    3.9164 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1129    1.6807   -0.3025 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2891    1.8419    0.7861 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2990   -1.2656   -2.0984 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3591    2.3920    0.9878 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3117    1.1226   -1.8450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4564   -0.4495   -2.1039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3859   -0.1283   -3.5915 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3072   -2.7300   -3.4202 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4704   -3.7747   -0.9742 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3474   -4.6278    3.3466 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.6874   -5.8325    2.2116 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.7835   -2.1821   -0.1091 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8289   -0.7332   -2.1832 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2665   -1.0563   -4.5669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9838    0.1804   -0.9955 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.3373    1.9394   -0.5233 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1663    2.1678    0.8942 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  4  6  1  0
  2  7  1  0
  7  8  1  0
  8  9  2  0
  8 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  2  0
 19 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 23 25  1  0
 23 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  2  0
 28 30  1  0
 28 31  1  0
 31 32  1  0
 32 33  2  0
 32 34  1  0
 32 35  1  0
 35 36  1  0
 36 37  1  0
 37 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  2  0
 42 43  1  0
 43 44  2  0
 44 45  1  0
 44 46  1  0
 46 47  2  0
 47 48  1  0
 48 49  2  0
 39 50  1  0
 50 51  1  0
 50 52  1  0
 52 53  1  0
 53 54  1  0
 54 55  2  0
 54 56  1  0
 54 57  1  0
 52 37  1  0
 49 40  1  0
 49 43  1  0
  1 58  1  0
  1 59  1  0
  1 60  1  0
  3 61  1  0
  6 62  1  0
  7 63  1  0
  7 64  1  0
 11 65  1  0
 11 66  1  0
 12 67  1  0
 12 68  1  0
 13 69  1  0
 16 70  1  0
 16 71  1  0
 17 72  1  0
 17 73  1  0
 18 74  1  0
 21 75  1  1
 22 76  1  0
 24 77  1  0
 24 78  1  0
 24 79  1  0
 25 80  1  0
 25 81  1  0
 25 82  1  0
 26 83  1  0
 26 84  1  0
 30 85  1  0
 34 86  1  0
 36 87  1  0
 36 88  1  0
 37 89  1  6
 39 90  1  6
 41 91  1  0
 45 92  1  0
 45 93  1  0
 47 94  1  0
 50 95  1  1
 51 96  1  0
 52 97  1  1
 56 98  1  0
 57 99  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Value	Source
(e)-3-Methylglutaconyl-1-CoA	ChEBI
3-Methylglutaconyl-CoA	ChEBI
(E)-3-Methylglutaconyl-1-coenzyme A	HMDB
3-Methylglutaconyl CoA	HMDB
3-Methylglutaconyl-coenzyme A	HMDB
beta-Methylglutaconyl-CoA	HMDB
beta-Methylglutaconyl-coenzyme A	HMDB
trans-3-Methylglutaconyl-CoA	HMDB
trans-3-Methylglutaconyl-coenzyme A	HMDB
β-Methylglutaconyl-CoA	HMDB
β-Methylglutaconyl-coenzyme A	HMDB

Chemical Formula

C₂₇H₄₂N₇O₁₉P₃S

Average Molecular Weight

893.64

Monoisotopic Molecular Weight

893.146904328

IUPAC Name

(2E)-5-[(2-{3-[(2R)-3-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-2-hydroxy-3-methylbutanamido]propanamido}ethyl)sulfanyl]-3-methyl-5-oxopent-2-enoic acid

Traditional Name

trans-3-methylglutaconyl-coa

CAS Registry Number

6247-73-0

SMILES

C\C(CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N)=C/C(O)=O

InChI Identifier

InChI=1S/C27H42N7O19P3S/c1-14(8-17(36)37)9-18(38)57-7-6-29-16(35)4-5-30-25(41)22(40)27(2,3)11-50-56(47,48)53-55(45,46)49-10-15-21(52-54(42,43)44)20(39)26(51-15)34-13-33-19-23(28)31-12-32-24(19)34/h8,12-13,15,20-22,26,39-40H,4-7,9-11H2,1-3H3,(H,29,35)(H,30,41)(H,36,37)(H,45,46)(H,47,48)(H2,28,31,32)(H2,42,43,44)/b14-8+/t15-,20-,21-,22+,26-/m1/s1

InChI Key

ZMMFWDHIXCPOHZ-XRYKKJIBSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as acyl coas. These are organic compounds containing a coenzyme A substructure linked to an acyl chain.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Fatty Acyls

Sub Class

Fatty acyl thioesters

Direct Parent

Acyl CoAs

Alternative Parents

Substituents

Coenzyme a or derivatives
Purine ribonucleoside 3',5'-bisphosphate
Purine ribonucleoside bisphosphate
Purine ribonucleoside diphosphate
Pentose phosphate
Pentose-5-phosphate
Ribonucleoside 3'-phosphate
Beta amino acid or derivatives
Glycosyl compound
N-glycosyl compound
6-aminopurine
Monosaccharide phosphate
Organic pyrophosphate
Pentose monosaccharide
Imidazopyrimidine
Purine
Aminopyrimidine
Monoalkyl phosphate
Alkyl phosphate
Fatty amide
Imidolactam
Monosaccharide
N-acyl-amine
N-substituted imidazole
Organic phosphoric acid derivative
Phosphoric acid ester
Pyrimidine
Tetrahydrofuran
Imidazole
Heteroaromatic compound
Azole
Secondary carboxylic acid amide
Secondary alcohol
Amino acid
Carboxamide group
Amino acid or derivatives
Thiocarboxylic acid ester
Carbothioic s-ester
Oxacycle
Azacycle
Monocarboxylic acid or derivatives
Organoheterocyclic compound
Thiocarboxylic acid or derivatives
Carboxylic acid derivative
Carboxylic acid
Sulfenyl compound
Organosulfur compound
Organic nitrogen compound
Alcohol
Amine
Carbonyl group
Primary amine
Organic oxide
Hydrocarbon derivative
Organic oxygen compound
Organopnictogen compound
Organonitrogen compound
Organooxygen compound
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

glutaconyl-CoA (CHEBI:15488 )

Ontology

Physiological effect

Not Available

Disposition

Biological location

Cytoplasm (HMDB: HMDB0001057)
Cell membrane (HMDB: HMDB0001057)

Cellular substructure

Organelle

Mitochondria

Mitochondria (HMDB: HMDB0001057)

Biofluid or Excreta

Urine (HMDB: HMDB0001057)

Route of exposure

Enteral

Ingestion (HMDB: HMDB0001057)

Source

Endogenous

Endogenous (HMDB: HMDB0001057)

Plant

Animal

Animal (HMDB: HMDB0001057)

Exogenous

Food

Food (HMDB: HMDB0001057)

Animal origin

Poultry

Greylag goose (FooDB: FOOD00368)
Guinea hen (FooDB: FOOD00373)
Ostrich (FooDB: FOOD00422)
Velvet duck (FooDB: FOOD00427)
Pheasant (FooDB: FOOD00430)
Squab (FooDB: FOOD00481)
Turkey (FooDB: FOOD00494)
Quail (FooDB: FOOD00541)
Anatidae (FooDB: FOOD00576)
Rock ptarmigan (FooDB: FOOD00597)
Columbidae (Dove, Pigeon) (FooDB: FOOD00610)
Chicken (FooDB: FOOD00329)
Mallard duck (FooDB: FOOD00353)
Emu (FooDB: FOOD00360)

Equine

Horse (FooDB: FOOD00378)

Lagomorph

Ovis

Sheep (Mutton, Lamb) (FooDB: FOOD00473)

Bovine

Venison

Deer (FooDB: FOOD00524)
Mule deer (FooDB: FOOD00348)
Elk (FooDB: FOOD00359)

Caprae

Domestic goat (FooDB: FOOD00529)

Swine

Domestic pig (FooDB: FOOD00536)
Wild boar (FooDB: FOOD00307)

Herb and spice mixture

Curry powder (FooDB: FOOD00678)

Herbs and Spices (FooDB: FOOD00866)

Vegetable

Cabbage

Onion-family vegetable

Allium (FooDB: FOOD00005)
Garden onion (FooDB: FOOD00006)
Leek (FooDB: FOOD00007)
Garden onion (var.) (FooDB: FOOD00226)
Shallot (FooDB: FOOD00243)
Wild leek (FooDB: FOOD00396)
Red onion (FooDB: FOOD00962)
Green onion (FooDB: FOOD00963)
Onion-family vegetables (FooDB: FOOD00855)

Root vegetable

Shoot vegetable

Leaf vegetable

Common beet (FooDB: FOOD00025)
Endive (FooDB: FOOD00048)
Rocket salad (ssp.) (FooDB: FOOD00077)
Swamp cabbage (FooDB: FOOD00091)
Lettuce (FooDB: FOOD00095)
Garden cress (FooDB: FOOD00099)
Spinach (FooDB: FOOD00178)
Swiss chard (FooDB: FOOD00237)
Chicory leaves (FooDB: FOOD00250)
Garland chrysanthemum (FooDB: FOOD00333)
Corn salad (FooDB: FOOD00340)
Jute (FooDB: FOOD00389)
Lambsquarters (FooDB: FOOD00394)
Malabar spinach (FooDB: FOOD00404)
New Zealand spinach (FooDB: FOOD00415)
Yautia (FooDB: FOOD00510)
Ostrich fern (FooDB: FOOD00556)
Romaine lettuce (FooDB: FOOD00888)
Iceberg lettuce (FooDB: FOOD00973)
Pea shoots (FooDB: FOOD00975)
Yau choy (FooDB: FOOD00976)
Water spinach (FooDB: FOOD00977)
Rocket salad (FooDB: FOOD00244)
Green vegetables (FooDB: FOOD00872)

Fruit vegetable

Pepper (FooDB: FOOD00040)
Olive (FooDB: FOOD00121)
Avocado (FooDB: FOOD00130)
Garden tomato (FooDB: FOOD00171)
Cherry tomato (FooDB: FOOD00172)
Garden tomato (var.) (FooDB: FOOD00173)
Eggplant (FooDB: FOOD00174)
Pepper (C. baccatum) (FooDB: FOOD00231)
Pepper (C. chinense) (FooDB: FOOD00232)
Pepper (Capsicum) (FooDB: FOOD00233)
Groundcherry (FooDB: FOOD00371)
Pepper (C. frutescens) (FooDB: FOOD00428)
Mexican groundcherry (FooDB: FOOD00491)
Pepper (C. pubescens) (FooDB: FOOD00849)
Green bell pepper (FooDB: FOOD00877)
Yellow bell pepper (FooDB: FOOD00878)
Orange bell pepper (FooDB: FOOD00879)
Red bell pepper (FooDB: FOOD00880)
Italian sweet red pepper (FooDB: FOOD00881)
Jalapeno pepper (FooDB: FOOD00955)
Cubanelle pepper (FooDB: FOOD00971)

Tuber

Stalk vegetable

Other vegetable

Giant butterbur (FooDB: FOOD00314)
Carob (FooDB: FOOD00321)
Chinese water chestnut (FooDB: FOOD00332)
Horseradish tree (FooDB: FOOD00379)
Sacred lotus (FooDB: FOOD00402)
Nopal (FooDB: FOOD00416)
Okra (FooDB: FOOD00420)
Sesbania flower (FooDB: FOOD00469)
Agave (FooDB: FOOD00563)
Narrowleaf cattail (FooDB: FOOD00564)
Heart of palm (FooDB: FOOD00718)
Tree fern (FooDB: FOOD00797)

Mushroom

Castanospermum australe (FooDB: FOOD00893)
Gentiana lutea (FooDB: FOOD00894)
Juniperus communis (FooDB: FOOD00895)
Albizia gummifera (FooDB: FOOD00896)

Brassica

Brassicas (FooDB: FOOD00857)

Fruit

Tropical fruit

Citrus

Lime (FooDB: FOOD00053)
Lemon (FooDB: FOOD00054)
Pummelo (FooDB: FOOD00055)
Mandarin orange (Clementine, Tangerine) (FooDB: FOOD00056)
Sweet orange (FooDB: FOOD00057)
Grapefruit/Pummelo hybrid (FooDB: FOOD00255)
Grapefruit (FooDB: FOOD00256)
Persian lime (FooDB: FOOD00543)
Sour orange (FooDB: FOOD00918)
Mikan (FooDB: FOOD00932)
Clementine (FooDB: FOOD00959)
Citrus (FooDB: FOOD00859)

Pome

Berry

Black crowberry (FooDB: FOOD00075)
Strawberry (FooDB: FOOD00083)
Black huckleberry (FooDB: FOOD00084)
Sea-buckthornberry (FooDB: FOOD00087)
Mulberry (FooDB: FOOD00116)
Black mulberry (FooDB: FOOD00117)
Black chokeberry (FooDB: FOOD00136)
Blackcurrant (FooDB: FOOD00155)
Redcurrant (FooDB: FOOD00156)
Gooseberry (FooDB: FOOD00157)
Cloudberry (FooDB: FOOD00161)
Red raspberry (FooDB: FOOD00162)
Black raspberry (FooDB: FOOD00163)
Black elderberry (FooDB: FOOD00166)
Rowanberry (FooDB: FOOD00176)
Vaccinium (Blueberry, Cranberry, Huckleberry) (FooDB: FOOD00188)
Lowbush blueberry (FooDB: FOOD00189)
Sparkleberry (FooDB: FOOD00190)
Highbush blueberry (FooDB: FOOD00191)
American cranberry (FooDB: FOOD00192)
Bilberry (FooDB: FOOD00193)
Lingonberry (FooDB: FOOD00194)
Muscadine grape (FooDB: FOOD00203)
Common grape (FooDB: FOOD00204)
Arctic blackberry (FooDB: FOOD00207)
Bayberry (FooDB: FOOD00209)
Elliott's blueberry (FooDB: FOOD00210)
Canada blueberry (FooDB: FOOD00211)
Bog bilberry (FooDB: FOOD00212)
Buffalo currant (FooDB: FOOD00213)
European cranberry (FooDB: FOOD00217)
Deerberry (FooDB: FOOD00218)
Cascade huckleberry (FooDB: FOOD00220)
Oval-leaf huckleberry (FooDB: FOOD00221)
Evergreen huckleberry (FooDB: FOOD00222)
Red huckleberry (FooDB: FOOD00223)
Summer grape (FooDB: FOOD00227)
Fox grape (FooDB: FOOD00228)
Half-highbush blueberry (FooDB: FOOD00248)
Jostaberry (FooDB: FOOD00257)
Sweet rowanberry (FooDB: FOOD00265)
Skunk currant (FooDB: FOOD00267)
Squashberry (FooDB: FOOD00344)
Elderberry (FooDB: FOOD00358)
Grape (FooDB: FOOD00369)
Alaska blueberry (FooDB: FOOD00380)
Loganberry (FooDB: FOOD00400)
Ohelo berry (FooDB: FOOD00419)
Salmonberry (FooDB: FOOD00456)
Strawberry guava (FooDB: FOOD00482)
Boysenberry (FooDB: FOOD00542)
Chinese bayberry (FooDB: FOOD00852)
Saskatoon berry (FooDB: FOOD00884)
Nanking cherry (FooDB: FOOD00885)
Rabbiteye blueberry (FooDB: FOOD00898)
Blackberry (FooDB: FOOD00906)
Partridge berry (FooDB: FOOD00931)
Green grape (FooDB: FOOD00964)
Red grape (FooDB: FOOD00965)
Black plum (FooDB: FOOD00966)
Black raisin (FooDB: FOOD00968)
Chinese plum (FooDB: FOOD00978)
Green plum (FooDB: FOOD00979)
Wampee (FooDB: FOOD00980)
Goji (FooDB: FOOD00982)
Monk fruit (FooDB: FOOD00983)
Hawthorn (FooDB: FOOD00985)
Lantern fruit (FooDB: FOOD00986)
Cape gooseberry (FooDB: FOOD00988)
Rubus (Blackberry, Raspberry) (FooDB: FOOD00160)

Other fruit

Fig (FooDB: FOOD00081)
Date (FooDB: FOOD00135)
Jujube (FooDB: FOOD00388)

Drupe

Prunus (Cherry, Plum) (FooDB: FOOD00143)
Apricot (FooDB: FOOD00144)
Sweet cherry (FooDB: FOOD00145)
Sour cherry (FooDB: FOOD00146)
European plum (FooDB: FOOD00147)
Peach (FooDB: FOOD00149)
Nectarine (FooDB: FOOD00229)
Peach (var.) (FooDB: FOOD00230)
Common chokecherry (FooDB: FOOD00562)

Fruits (FooDB: FOOD00871)

Nut

Cashew nut (FooDB: FOOD00011)
Peanut (FooDB: FOOD00016)
Brazil nut (FooDB: FOOD00024)
Pecan nut (FooDB: FOOD00044)
Chestnut (FooDB: FOOD00045)
Common hazelnut (FooDB: FOOD00062)
Black walnut (FooDB: FOOD00093)
Common walnut (FooDB: FOOD00094)
Pine nut (FooDB: FOOD00138)
Pistachio (FooDB: FOOD00140)
Almond (FooDB: FOOD00148)
Macadamia nut (M. tetraphylla) (FooDB: FOOD00225)
Japanese walnut (FooDB: FOOD00240)
Acorn (FooDB: FOOD00282)
Beech nut (FooDB: FOOD00299)
Butternut (FooDB: FOOD00316)
Chinese chestnut (FooDB: FOOD00331)
European chestnut (FooDB: FOOD00363)
Hazelnut (FooDB: FOOD00376)
Hickory nut (FooDB: FOOD00377)
Japanese chestnut (FooDB: FOOD00385)
Pili nut (FooDB: FOOD00432)
Colorado pinyon (FooDB: FOOD00433)
Macadamia nut (FooDB: FOOD00525)
Walnut (FooDB: FOOD00608)
Mixed nuts (FooDB: FOOD00771)
Nuts (FooDB: FOOD00869)

Cereal and cereal product

Cereal

Cereal product

Dough

Sourdough (FooDB: FOOD00275)

Leavened bread

Flat bread

Other bread

Potato bread (FooDB: FOOD00811)
Other bread (FooDB: FOOD00269)

Sweet bread

Raisin bread (FooDB: FOOD00817)

Cereals and cereal products (FooDB: FOOD00858)

Pulse

Pea

Lentil

Lentils (FooDB: FOOD00098)

Other pulse

Lupine (FooDB: FOOD00104)
White lupine (FooDB: FOOD00403)

Bean

Green lentil (FooDB: FOOD00970)
Pulses (FooDB: FOOD00867)

Gourd

Watermelon (FooDB: FOOD00052)
Muskmelon (FooDB: FOOD00064)
Cucumber (FooDB: FOOD00065)
Cucurbita (FooDB: FOOD00066)
Bitter gourd (FooDB: FOOD00115)
Winter squash (FooDB: FOOD00283)
Butternut squash (FooDB: FOOD00317)
Calabash (FooDB: FOOD00318)
Chayote (FooDB: FOOD00325)
Towel gourd (FooDB: FOOD00492)
Wax gourd (FooDB: FOOD00499)
Tinda (FooDB: FOOD00559)
Horned melon (FooDB: FOOD00761)
Sunburst squash (pattypan squash) (FooDB: FOOD00874)
Green zucchini (FooDB: FOOD00875)
Yellow zucchini (FooDB: FOOD00876)
Japanese pumpkin (FooDB: FOOD00886)
Acorn squash (FooDB: FOOD00972)
Cantaloupe melon (FooDB: FOOD00984)

Coffee and coffee product

Coffee

Arabica coffee (FooDB: FOOD00059)
Robusta coffee (FooDB: FOOD00060)

Soy

Soy bean (FooDB: FOOD00085)

Soy product

Tea

Herbal tea

Hibiscus tea (FooDB: FOOD00723)
Greenthread tea (FooDB: FOOD00820)

Baking good

Wrapper

Wonton wrapper (FooDB: FOOD00818)

Dish

Other dish

Tostada shell (FooDB: FOOD00992)
Taco shell (FooDB: FOOD00991)

Abalone (FooDB: FOOD00279)
Conch (FooDB: FOOD00611)

Cocoa and cocoa product

Cocoa

Cocoa bean (FooDB: FOOD00182)

Process

Naturally occurring process

Biological process

Biochemical pathway

Metabolic pathway

Valine, Leucine, and Isoleucine Degradation (HMDB: HMDB0001057)
Leucine Degradation (PathBank: SMP0002433)

Valine, Leucine and Isoleucine Degradation (HMDB: HMDB0001057)

Disease pathway

beta-Ketothiolase Deficiency (PathBank: SMP0000173)
2-Methyl-3-hydroxybutryl-CoA Dehydrogenase Deficiency (PathBank: SMP0000137)
Propionic Acidemia (PathBank: SMP0000236)
3-Hydroxy-3-methylglutaryl-CoA Lyase Deficiency (PathBank: SMP0000138)
Maple Syrup Urine Disease (PathBank: SMP0000199)
3-Methylcrotonyl-CoA Carboxylase Deficiency Type I (PathBank: SMP0000237)
3-Methylglutaconic Aciduria Type I (PathBank: SMP0000139)
3-Methylglutaconic Aciduria Type III (PathBank: SMP0000140)
Methylmalonate Semialdehyde Dehydrogenase Deficiency (PathBank: SMP0000384)
Methylmalonic Aciduria (PathBank: SMP0000200)
Isovaleric Aciduria (PathBank: SMP0000238)
3-Methylglutaconic Aciduria Type IV (PathBank: SMP0000141)
3-Hydroxyisobutyric Acid Dehydrogenase Deficiency (PathBank: SMP0000521)
3-Hydroxyisobutyric Aciduria (PathBank: SMP0000522)
Isobutyryl-CoA Dehydrogenase Deficiency (PathBank: SMP0000523)
Isovaleric Acidemia (PathBank: SMP0000524)
2-Methyl-3-hydroxybutryl-CoA Dehydrogenase Deficiency (PathBank: SMP0120439)

Chemical reaction

Lipid peroxidation (HMDB: HMDB0001057)

Biochemical process

Fatty acid metabolism (HMDB: HMDB0001057)

Cellular process

Cell signaling (HMDB: HMDB0001057)

Role

Biological role

Membrane stabilizer (HMDB: HMDB0001057)

Nutrient

Nutrient (HMDB: HMDB0001057)

Industrial application

Manufacturing industry

Material processing agent

Fluid processing agent

Surfactant

Surfactant (HMDB: HMDB0001057)

Emulsifier (HMDB: HMDB0001057)

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
Water Solubility	3.24 g/L	ALOGPS
logP	-0.45	ALOGPS
logP	-5.4	ChemAxon
logS	-2.4	ALOGPS
pKa (Strongest Acidic)	0.82	ChemAxon
pKa (Strongest Basic)	3.88	ChemAxon
Physiological Charge	-5	ChemAxon
Hydrogen Acceptor Count	19	ChemAxon
Hydrogen Donor Count	10	ChemAxon
Polar Surface Area	400.93 Å²	ChemAxon
Rotatable Bond Count	23	ChemAxon
Refractivity	193.08 m³·mol⁻¹	ChemAxon
Polarizability	80.16 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	221.162	30932474
DeepCCS	[M-H]-	219.338	30932474
DeepCCS	[M-2H]-	253.294	30932474
DeepCCS	[M+Na]+	227.068	30932474
AllCCS	[M+H]+	262.5	32859911
AllCCS	[M+H-H2O]+	263.0	32859911
AllCCS	[M+NH4]+	261.9	32859911
AllCCS	[M+Na]+	261.7	32859911
AllCCS	[M-H]-	261.1	32859911
AllCCS	[M+Na-2H]-	265.5	32859911
AllCCS	[M+HCOO]-	270.3	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
3-Methylglutaconyl-CoA	C\C(CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N)=C/C(O)=O	6320.4	Standard polar	33892256
3-Methylglutaconyl-CoA	C\C(CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N)=C/C(O)=O	4533.2	Standard non polar	33892256
3-Methylglutaconyl-CoA	C\C(CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)N1C=NC2=C1N=CN=C2N)=C/C(O)=O	6867.9	Semi standard non polar	33892256

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-Methylglutaconyl-CoA 10V, Positive-QTOF	splash10-05po-0000000490-cbc9a61bb844c103b165	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-Methylglutaconyl-CoA 20V, Positive-QTOF	splash10-0a4r-0500000290-c038c5d0f184f7392dda	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-Methylglutaconyl-CoA 40V, Positive-QTOF	splash10-000i-1029000000-92441da9568ff9cb8322	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-Methylglutaconyl-CoA 10V, Negative-QTOF	splash10-0006-0000000090-7573bd59b264f1bcb00d	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-Methylglutaconyl-CoA 20V, Negative-QTOF	splash10-0103-6600101490-16597c66f6c0d3e33dc7	2021-09-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 3-Methylglutaconyl-CoA 40V, Negative-QTOF	splash10-0059-7602501690-2bab8341968bb9154e73	2021-09-22	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-09-16	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane
Mitochondria

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Name	SMPDB/PathBank	KEGG
Valine, leucine and isoleucine degradation	Not Available
Beta-Ketothiolase Deficiency		Not Available
2-Methyl-3-Hydroxybutryl CoA Dehydrogenase Deficiency		Not Available
Propionic Acidemia		Not Available
3-Hydroxy-3-Methylglutaryl-CoA Lyase Deficiency		Not Available

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

FDB022396

KNApSAcK ID

Not Available

Chemspider ID

10140111

KEGG Compound ID

C03231

BioCyc ID

TRANS-3-METHYL-GLUTACONYL-COA

BiGG ID

Not Available

Wikipedia Link

3-Methylglutaconyl-CoA

METLIN ID

Not Available

PubChem Compound

11966117

PDB ID

Not Available

ChEBI ID

15488

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Hermans-Lokkerbol, Ank; van der Heijden, Robert; Verpoorte, Robert. Isocratic high-performance liquid chromatography of coenzyme A esters involved in the metabolism of 3S-hydroxy-3-methylglutaryl-coenzyme A. Detection of related enzyme activities in Catharanthus roseus plant cell cultures. Journal of Chromatography, A (1996), 752(1+2), 123-130.

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Enzymes

Enzyme Details

1. Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial

General function:: Involved in ligase activity
Specific function:: Not Available
Gene Name:: MCCC2
Uniprot ID:: Q9HCC0
Molecular weight:: 61332.65

Reactions

Adenosine triphosphate + 3-Methylcrotonyl-CoA + Hydrogen carbonate → ADP + Phosphate + 3-Methylglutaconyl-CoA	details

Enzyme Details

2. Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial

General function:: Involved in catalytic activity
Specific function:: Not Available
Gene Name:: MCCC1
Uniprot ID:: Q96RQ3
Molecular weight:: 80472.45

Reactions

Adenosine triphosphate + 3-Methylcrotonyl-CoA + Hydrogen carbonate → ADP + Phosphate + 3-Methylglutaconyl-CoA	details

Enzyme Details

3. Methylglutaconyl-CoA hydratase, mitochondrial

General function:: Involved in catalytic activity
Specific function:: Catalyzes the conversion of 3-methylglutaconyl-CoA to 3-hydroxy-3-methylglutaryl-CoA. Has very low enoyl-CoA hydratase activity. Was originally identified as RNA-binding protein that binds in vitro to clustered 5'-AUUUA-3' motifs.
Gene Name:: AUH
Uniprot ID:: Q13825
Molecular weight:: 35608.18

Reactions

3-Hydroxy-3-methylglutaryl-CoA → 3-Methylglutaconyl-CoA + Water	details
3-Hydroxy-3-methylglutaryl-CoA → 3-Methylglutaconyl-CoA + Water	details

Showing metabocard for 3-Methylglutaconyl-CoA (HMDB0001057)

MOL for HMDB0001057 (3-Methylglutaconyl-CoA)

3D MOL for HMDB0001057 (3-Methylglutaconyl-CoA)

3D SDF for HMDB0001057 (3-Methylglutaconyl-CoA)

3D-SDF for HMDB0001057 (3-Methylglutaconyl-CoA)

PDB for HMDB0001057 (3-Methylglutaconyl-CoA)

3D PDB for HMDB0001057 (3-Methylglutaconyl-CoA)

SMILES for HMDB0001057 (3-Methylglutaconyl-CoA)

INCHI for HMDB0001057 (3-Methylglutaconyl-CoA)

Structure for HMDB0001057 (3-Methylglutaconyl-CoA)

3D Structure for HMDB0001057 (3-Methylglutaconyl-CoA)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

MS/MS Spectra

NMR Spectra

Enzymes

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