Hmdb loader
Record Information
Version5.0
StatusExpected but not Quantified
Creation Date2017-09-07 19:57:45 UTC
Update Date2022-03-07 03:18:04 UTC
HMDB IDHMDB0112069
Secondary Accession NumbersNone
Metabolite Identification
Common Name12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid
Description12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid is an unsaturated furan fatty acid (F-acid). F-acids are heterocyclic fatty acids containing a central furan moiety with a carboxylalkyl chain (mostly 7, 9, 11, or 13 carbons) in the 2-position and an alkyl chain (mostly 3 or 5 carbons) in the 5-position. Despite being found in low concentrations in food lipids, they are excellent antixoxidants and radical scavengers. This allows them to play an important role in preventing lipid peroxidation and protecting polyunsaturated fatty acids. They are often incorporated into phospholipids and cholesterol esters of fish and other marine organisms. 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid, in particular, can be described by the shorthand notation 11D5:1. This refers to its 11-carbon carboxyalkenyl moiety, the dimethyl substitutions in the 3- and 4-positions of its furan moiety, and its 5-carbon alkyl moiety. It has been identified in the fish liver.
Structure
Data?1563873214
Synonyms
ValueSource
(10E)-11-(3,4-Dimethyl-5-pentylfuran-2-yl)undec-10-enoateGenerator
11:1D5SMPDB, HMDB
DiMe(11:1,5)SMPDB, HMDB
12,15-epoxy-13,14-dimethyl-10,12,14-eicosatrienoic acidSMPDB, HMDB
12,15-epoxy-13,14-dimethyleicosa-10,12,14-trienoic acidSMPDB
12,15-Epoxy-13,14-dimethylicosa-10,12,14-trienoateGenerator, HMDB
12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoateGenerator
Chemical FormulaC22H36O3
Average Molecular Weight348.527
Monoisotopic Molecular Weight348.266445019
IUPAC Name(10E)-11-(3,4-dimethyl-5-pentylfuran-2-yl)undec-10-enoic acid
Traditional Name(10E)-11-(3,4-dimethyl-5-pentylfuran-2-yl)undec-10-enoic acid
CAS Registry NumberNot Available
SMILES
[H]\C(CCCCCCCCC(O)=O)=C(\[H])C1=C(C)C(C)=C(CCCCC)O1
InChI Identifier
InChI=1S/C22H36O3/c1-4-5-12-15-20-18(2)19(3)21(25-20)16-13-10-8-6-7-9-11-14-17-22(23)24/h13,16H,4-12,14-15,17H2,1-3H3,(H,23,24)/b16-13+
InChI KeyXCBKJOCQMTZFQG-DTQAZKPQSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as long-chain fatty acids. These are fatty acids with an aliphatic tail that contains between 13 and 21 carbon atoms.
KingdomOrganic compounds
Super ClassLipids and lipid-like molecules
ClassFatty Acyls
Sub ClassFatty acids and conjugates
Direct ParentLong-chain fatty acids
Alternative Parents
Substituents
  • Long-chain fatty acid
  • Furanoid fatty acid
  • Heterocyclic fatty acid
  • Unsaturated fatty acid
  • Furan
  • Heteroaromatic compound
  • Carboxylic acid derivative
  • Carboxylic acid
  • Oxacycle
  • Monocarboxylic acid or derivatives
  • Organoheterocyclic compound
  • Organic oxide
  • Hydrocarbon derivative
  • Carbonyl group
  • Organooxygen compound
  • Organic oxygen compound
  • Aromatic heteromonocyclic compound
Molecular FrameworkAromatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
DispositionNot Available
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP6.89ALOGPS
logP7.48ChemAxon
logS-5.3ALOGPS
pKa (Strongest Acidic)5.02ChemAxon
pKa (Strongest Basic)-2.6ChemAxon
Physiological Charge-1ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count1ChemAxon
Polar Surface Area50.44 ŲChemAxon
Rotatable Bond Count14ChemAxon
Refractivity105.84 m³·mol⁻¹ChemAxon
Polarizability44.89 ųChemAxon
Number of Rings1ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DarkChem[M+H]+191.48131661259
DarkChem[M-H]-190.1631661259
DeepCCS[M+H]+197.48930932474
DeepCCS[M-H]-195.13130932474
DeepCCS[M-2H]-229.06830932474
DeepCCS[M+Na]+204.38230932474
AllCCS[M+H]+196.132859911
AllCCS[M+H-H2O]+193.432859911
AllCCS[M+NH4]+198.632859911
AllCCS[M+Na]+199.332859911
AllCCS[M-H]-195.632859911
AllCCS[M+Na-2H]-197.632859911
AllCCS[M+HCOO]-200.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid[H]\C(CCCCCCCCC(O)=O)=C(\[H])C1=C(C)C(C)=C(CCCCC)O13715.2Standard polar33892256
12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid[H]\C(CCCCCCCCC(O)=O)=C(\[H])C1=C(C)C(C)=C(CCCCC)O12570.1Standard non polar33892256
12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid[H]\C(CCCCCCCCC(O)=O)=C(\[H])C1=C(C)C(C)=C(CCCCC)O12659.0Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid,1TMS,isomer #1CCCCCC1=C(C)C(C)=C(/C=C/CCCCCCCCC(=O)O[Si](C)(C)C)O12786.8Semi standard non polar33892256
12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid,1TBDMS,isomer #1CCCCCC1=C(C)C(C)=C(/C=C/CCCCCCCCC(=O)O[Si](C)(C)C(C)(C)C)O13031.0Semi standard non polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid GC-MS (1 TMS) - 70eV, Positivesplash10-0r99-7193100000-f57a74732c1ec0afa6192017-10-06Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 10V, Positive-QTOFsplash10-001i-0109000000-c2005476401f0980db2b2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 20V, Positive-QTOFsplash10-0kur-5697000000-53f81fd73c3d81bb7d0d2019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 40V, Positive-QTOFsplash10-05o0-9670000000-89cb7b67947a38c351e72019-02-22Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 10V, Negative-QTOFsplash10-0002-0009000000-ff5df9acbd89b228bbca2019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 20V, Negative-QTOFsplash10-0f92-1129000000-466a271005e3bfdb7db62019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 40V, Negative-QTOFsplash10-0a4u-9481000000-f0de451be01bdea9be712019-02-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 10V, Negative-QTOFsplash10-0002-0009000000-6e94ad9842b724e0ab852021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 20V, Negative-QTOFsplash10-054k-2009000000-d2fffe0e085684246dba2021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 40V, Negative-QTOFsplash10-01r7-6978000000-554e5a3da42a23b28a312021-09-23Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 10V, Positive-QTOFsplash10-000t-0049000000-702dc235d38f3ffe832f2021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 20V, Positive-QTOFsplash10-03di-0789000000-d8a6531acda91dc1b9f22021-09-25Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 12,15-Epoxy-13,14-dimethyleicosa-10,12,14-trienoic acid 40V, Positive-QTOFsplash10-00dl-6920000000-8d0ed84cf014b976d6d82021-09-25Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen LocationsNot Available
Tissue LocationsNot Available
Pathways
Normal Concentrations
Not Available
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider IDNot Available
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound13965209
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Vetter W, Wendlinger C (2013). Furan fatty acids – valuable minor fatty acids in food. Lipid Technology.
  2. Vetter W, Ulms K, Wendlinger C, van Rijn J (2016). Novel non-methylated furan fatty acids in fish from a zero discharge aquaculture system. NFS Journal.