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Record Information

Version

5.0

Status

Expected but not Quantified

Creation Date

2017-09-08 22:19:57 UTC

Update Date

2022-11-30 19:24:56 UTC

HMDB ID

HMDB0113296

Secondary Accession Numbers

None

Metabolite Identification

Common Name

PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))

Description

PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) is a monomethylphosphatidylethanolamine. It is a glycerophospholipid, and it is formed by sequential methylation of phosphatidylethanolamine as part of a mechanism for biosynthesis of phosphatidylcholine. Monomethylphosphatidylethanolamines are usually found at trace levels in animal or plant tissues. They can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)), in particular, consists of one chain of arachidic acid at the C-1 position and one chain of arachidonic acid at the C-2 position. Fatty acids containing 16, 18 and 20 carbons are the most common. Phospholipids are ubiquitous in nature. They are key components of the cell lipid bilayer and are involved in metabolism and signaling.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))
  Mrv1652309151723502D          

 57 56  0  0  1  0            999 V2000
   29.3976   11.9444    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   29.4018   10.9029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.3643   11.3492    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.6161   10.9919    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.1970   11.2601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.0560   10.8436    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.0595   10.8436    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   32.0595   11.6686    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.0893   10.0186    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.8845   10.8138    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   33.6839   11.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.4494   10.8137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.2016   11.3100    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   35.9964   10.7913    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.3976    9.6271    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.9360   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9360   12.2303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.2219   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.5077   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.7936   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.0795   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3654   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.6513   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9372   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2231   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5090   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.7948   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.0807   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.3666   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6525   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9383   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2242   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5101   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7960   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0819   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3678   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.7844    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.7844    8.3036    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.0703    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.3562    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.6421    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.9280    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.1030    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.3889    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.6748    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.8498    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1357    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.4215    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5965    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8824    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1683    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.3434    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6292    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9151    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2010    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4869    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7727    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  2  3  1  0  0  0  0
  2  5  1  0  0  0  0
  2 15  1  0  0  0  0
  3  4  1  0  0  0  0
  4 16  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  7 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 15 37  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 37 38  2  0  0  0  0
 37 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  2  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  2  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  2  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  2  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  END

HMDB0113296
     RDKit          3D
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))
140139  0  0  0  0  0  0  0  0999 V2000
   16.4638   -3.6953   -3.3917 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.8400   -3.0565   -2.0830 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5955   -2.8122   -1.2337 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6982   -1.9129   -2.0010 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3975   -1.6006   -1.2492 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6718   -2.8254   -0.9869 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2887   -3.3655    0.1153 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4741   -2.9024    1.4926 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2401   -1.6998    1.6717 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8194   -0.5928    2.1962 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5650   -0.1928    2.7452 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3913   -1.0185    2.8899 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2586   -0.7496    2.2583 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0939    0.3925    1.3547 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1539    1.4140    1.7818 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1014    1.7956    1.1513 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6201    1.2888   -0.1144 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1797    0.7901   -0.0262 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7106    0.2786   -1.3695 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2567   -0.0974   -1.2738 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6067   -0.6354   -2.1771 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6025    0.1864   -0.0957 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2560   -0.0390    0.2053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0417   -0.8874    1.4543 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3065   -1.0255    1.7738 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2509   -1.5803    0.9525 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9365   -2.0090   -0.1790 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6506   -1.6437    1.4684 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4006   -0.4030    1.0676 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7866   -0.4332    1.5934 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6586   -1.5512    1.1312 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8244   -1.5211   -0.3662 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7214   -2.6316   -0.8233 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0823   -2.5467   -0.2123 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7560   -1.2447   -0.5666 C   0  0  0  0  0  0  0  0  0  0  0  0
  -10.1228   -1.1403    0.0354 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.0771   -2.2045   -0.4023 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.3391   -2.2248   -1.8707 C   0  0  0  0  0  0  0  0  0  0  0  0
  -11.9315   -0.9719   -2.4261 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2932   -0.6252   -1.8104 C   0  0  0  0  0  0  0  0  0  0  0  0
  -13.7328    0.6418   -2.4596 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.0800    1.1546   -1.9968 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1614    1.4358   -0.5338 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.5202    1.9711   -0.1899 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.6378    1.0465   -0.5229 C   0  0  0  0  0  0  0  0  0  0  0  0
  -18.9918    1.6276   -0.1384 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6891    1.3405    0.5650 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8346    2.2020   -0.5154 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.2338    3.7329   -0.0530 P   0  0  0  0  0  5  0  0  0  0  0  0
   -1.0185    3.6071    0.7808 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0391    4.6770   -1.4089 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4465    4.4216    0.9104 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2179    5.3534    0.2383 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2609    5.8883    1.2035 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6704    6.5159    2.3434 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.7082    6.9697    3.2720 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.3929   -4.1042   -3.8502 H   0  0  0  0  0  0  0  0  0  0  0  0
   16.0218   -2.9549   -4.0920 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.7691   -4.5433   -3.2776 H   0  0  0  0  0  0  0  0  0  0  0  0
   17.2910   -2.0721   -2.3087 H   0  0  0  0  0  0  0  0  0  0  0  0
   17.4870   -3.7507   -1.5320 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.8958   -2.2922   -0.2822 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.1416   -3.7679   -0.9550 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.3663   -2.3439   -2.9782 H   0  0  0  0  0  0  0  0  0  0  0  0
   15.1773   -0.9191   -2.1565 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.8172   -0.9939   -2.0723 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.6373   -0.8976   -0.4868 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.3926   -3.4195   -1.9367 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7096   -4.3721    0.0148 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.9894   -3.7813    2.0914 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.4771   -2.9151    2.0106 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.3496   -1.7481    1.3722 H   0  0  0  0  0  0  0  0  0  0  0  0
   13.6284    0.2275    2.2208 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.2909    0.8822    2.4210 H   0  0  0  0  0  0  0  0  0  0  0  0
   11.7883    0.1101    3.8918 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.3582   -1.9059    3.5815 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3949   -1.4242    2.4271 H   0  0  0  0  0  0  0  0  0  0  0  0
   10.0629    0.8590    1.0922 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.7893   -0.0523    0.3407 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.3622    1.9294    2.7666 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4703    2.6169    1.6239 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.1996    0.4349   -0.4708 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.6383    2.0326   -0.9469 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.4911    1.5369    0.4017 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.1130   -0.1046    0.6575 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.3044   -0.6100   -1.6588 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7822    1.0405   -2.1732 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7389   -0.4606   -0.6568 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5280   -0.3838    2.3305 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5491   -1.8882    1.3160 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1419   -2.5231    1.0206 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7096   -1.7237    2.5665 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8940    0.5090    1.4633 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4437   -0.3228   -0.0612 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7343   -0.4316    2.7185 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2769    0.5278    1.2648 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2941   -2.5338    1.4877 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6539   -1.3923    1.6397 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8105   -1.6405   -0.8518 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2360   -0.5583   -0.7258 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2557   -3.6206   -0.5679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8712   -2.5723   -1.9394 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.0323   -2.6457    0.8823 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7085   -3.4067   -0.5642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.7607   -1.1520   -1.6716 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.1475   -0.4154   -0.1749 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.5113   -0.1109   -0.1092 H   0  0  0  0  0  0  0  0  0  0  0  0
   -9.9982   -1.2419    1.1436 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0300   -2.0647    0.1491 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6787   -3.1819   -0.0939 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0832   -3.0558   -2.0442 H   0  0  0  0  0  0  0  0  0  0  0  0
  -10.4510   -2.4825   -2.4682 H   0  0  0  0  0  0  0  0  0  0  0  0
  -11.2461   -0.1117   -2.3415 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.0966   -1.1154   -3.5205 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.2192   -0.5280   -0.7171 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.0033   -1.4523   -2.0249 H   0  0  0  0  0  0  0  0  0  0  0  0
  -13.8732    0.4149   -3.5552 H   0  0  0  0  0  0  0  0  0  0  0  0
  -12.9411    1.4005   -2.3241 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.3150    2.0901   -2.5345 H   0  0  0  0  0  0  0  0  0  0  0  0
  -15.8710    0.4121   -2.2562 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.9786    0.5177    0.0717 H   0  0  0  0  0  0  0  0  0  0  0  0
  -14.3890    2.1787   -0.2108 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.7140    2.9296   -0.7582 H   0  0  0  0  0  0  0  0  0  0  0  0
  -16.5264    2.2361    0.9101 H   0  0  0  0  0  0  0  0  0  0  0  0
  -17.6816    0.9269   -1.6335 H   0  0  0  0  0  0  0  0  0  0  0  0
  -17.5289    0.0797   -0.0383 H   0  0  0  0  0  0  0  0  0  0  0  0
  -19.0887    1.7120    0.9495 H   0  0  0  0  0  0  0  0  0  0  0  0
  -19.7621    0.9615   -0.5179 H   0  0  0  0  0  0  0  0  0  0  0  0
  -19.1201    2.6226   -0.6340 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3396    1.6969    1.4098 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3372    1.2845    0.9656 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6326    4.4380   -2.1062 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5452    6.1656   -0.0999 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7106    4.8812   -0.6504 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8795    6.6399    0.6672 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8879    5.0269    1.5320 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0116    5.9237    2.8832 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3095    6.0476    3.5312 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2769    7.3161    4.2289 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3476    7.7269    2.8105 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  2  0
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  9 10  2  0
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 11 12  1  0
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 25 26  1  0
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 56138  1  0
 56139  1  0
 56140  1  0
M  END

PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))
  Mrv1652309151723502D          

 57 56  0  0  1  0            999 V2000
   29.3976   11.9444    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   29.4018   10.9029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.3643   11.3492    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.6161   10.9919    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   30.1970   11.2601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.0560   10.8436    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.0595   10.8436    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   32.0595   11.6686    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.0893   10.0186    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.8845   10.8138    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   33.6839   11.2006    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.4494   10.8137    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   35.2016   11.3100    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   35.9964   10.7913    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.3976    9.6271    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.9360   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.9360   12.2303    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   26.2219   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.5077   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.7936   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.0795   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.3654   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.6513   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9372   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2231   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5090   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.7948   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.0807   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.3666   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6525   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9383   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2242   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5101   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7960   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0819   11.4588    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3678   11.0457    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.7844    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.7844    8.3036    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   28.0703    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.3562    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.6421    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.9280    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.1030    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.3889    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.6748    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.8498    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1357    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.4215    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5965    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8824    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1683    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.3434    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6292    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9151    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2010    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4869    9.0750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7727    9.4882    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0  0  0  0
  2  3  1  0  0  0  0
  2  5  1  0  0  0  0
  2 15  1  0  0  0  0
  3  4  1  0  0  0  0
  4 16  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  7 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 15 37  1  0  0  0  0
 16 17  2  0  0  0  0
 16 18  1  0  0  0  0
 18 19  1  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 35 36  1  0  0  0  0
 37 38  2  0  0  0  0
 37 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  2  0  0  0  0
 43 44  1  0  0  0  0
 44 45  1  0  0  0  0
 45 46  2  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  2  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  2  0  0  0  0
 52 53  1  0  0  0  0
 53 54  1  0  0  0  0
 54 55  1  0  0  0  0
 55 56  1  0  0  0  0
 56 57  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0113296

> <DATABASE_NAME>
hmdb

> <SMILES>
[H]C(COC(=O)CCCCCCCCCCCCCCCCCCC)(COP(O)(=O)OCCNC)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C46H84NO8P/c1-4-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-38-45(48)52-42-44(43-54-56(50,51)53-41-40-47-3)55-46(49)39-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-5-2/h13,15,19,21,25,27,31,33,44,47H,4-12,14,16-18,20,22-24,26,28-30,32,34-43H2,1-3H3,(H,50,51)/b15-13-,21-19-,27-25-,33-31-

> <INCHI_KEY>
MYAWEMWBXNPVNK-SLLFMANOSA-N

> <FORMULA>
C46H84NO8P

> <MOLECULAR_WEIGHT>
810.151

> <EXACT_MASS>
809.593455667

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
140

> <JCHEM_AVERAGE_POLARIZABILITY>
100.05976603943887

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
{2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-(icosanoyloxy)propoxy}[2-(methylamino)ethoxy]phosphinic acid

> <ALOGPS_LOGP>
9.37

> <JCHEM_LOGP>
12.783460200773895

> <ALOGPS_LOGS>
-7.37

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8561780131737047

> <JCHEM_PKA_STRONGEST_BASIC>
10.045225536699881

> <JCHEM_POLAR_SURFACE_AREA>
120.38999999999999

> <JCHEM_REFRACTIVITY>
237.05290000000005

> <JCHEM_ROTATABLE_BOND_COUNT>
44

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.43e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-(icosanoyloxy)propoxy(2-(methylamino)ethoxy)phosphinic acid

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0113296
     RDKit          3D
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))
140139  0  0  0  0  0  0  0  0999 V2000
   16.4638   -3.6953   -3.3917 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.8400   -3.0565   -2.0830 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5955   -2.8122   -1.2337 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6982   -1.9129   -2.0010 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3975   -1.6006   -1.2492 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6718   -2.8254   -0.9869 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2887   -3.3655    0.1153 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4741   -2.9024    1.4926 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2401   -1.6998    1.6717 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8194   -0.5928    2.1962 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5650   -0.1928    2.7452 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3913   -1.0185    2.8899 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2586   -0.7496    2.2583 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0939    0.3925    1.3547 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1539    1.4140    1.7818 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1014    1.7956    1.1513 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6201    1.2888   -0.1144 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1797    0.7901   -0.0262 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7106    0.2786   -1.3695 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2567   -0.0974   -1.2738 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6067   -0.6354   -2.1771 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6025    0.1864   -0.0957 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.2560   -0.0390    0.2053 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0417   -0.8874    1.4543 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

HEADER    PROTEIN                                 15-SEP-17   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))                  
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   15-SEP-17         0                                  
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HETATM   46  C   UNK     0      42.653  16.940   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      41.320  17.711   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      39.987  16.940   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      38.447  16.940   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      37.114  17.711   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0      35.781  16.940   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0      34.241  16.940   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0      32.908  17.711   0.000  0.00  0.00           C+0
HETATM   54  C   UNK     0      31.575  16.940   0.000  0.00  0.00           C+0
HETATM   55  C   UNK     0      30.242  17.711   0.000  0.00  0.00           C+0
HETATM   56  C   UNK     0      28.909  16.940   0.000  0.00  0.00           C+0
HETATM   57  C   UNK     0      27.576  17.711   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3    5   15                                             
CONECT    3    2    4                                                       
CONECT    4    3   16                                                       
CONECT    5    2    6                                                       
CONECT    6    5    7                                                       
CONECT    7    6    8    9   10                                             
CONECT    8    7                                                            
CONECT    9    7                                                            
CONECT   10    7   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13                                                            
CONECT   15    2   37                                                       
CONECT   16    4   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34   36                                                       
CONECT   36   35                                                            
CONECT   37   15   38   39                                                  
CONECT   38   37                                                            
CONECT   39   37   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52   54                                                       
CONECT   54   53   55                                                       
CONECT   55   54   56                                                       
CONECT   56   55   57                                                       
CONECT   57   56                                                            
MASTER        0    0    0    0    0    0    0    0   57    0  112    0
END

COMPND    HMDB0113296
HETATM    1  C1  UNL     1      16.464  -3.695  -3.392  1.00  0.00           C  
HETATM    2  C2  UNL     1      16.840  -3.057  -2.083  1.00  0.00           C  
HETATM    3  C3  UNL     1      15.596  -2.812  -1.234  1.00  0.00           C  
HETATM    4  C4  UNL     1      14.698  -1.913  -2.001  1.00  0.00           C  
HETATM    5  C5  UNL     1      13.398  -1.601  -1.249  1.00  0.00           C  
HETATM    6  C6  UNL     1      12.672  -2.825  -0.987  1.00  0.00           C  
HETATM    7  C7  UNL     1      12.289  -3.366   0.115  1.00  0.00           C  
HETATM    8  C8  UNL     1      12.474  -2.902   1.493  1.00  0.00           C  
HETATM    9  C9  UNL     1      13.240  -1.700   1.672  1.00  0.00           C  
HETATM   10  C10 UNL     1      12.819  -0.593   2.196  1.00  0.00           C  
HETATM   11  C11 UNL     1      11.565  -0.193   2.745  1.00  0.00           C  
HETATM   12  C12 UNL     1      10.391  -1.018   2.890  1.00  0.00           C  
HETATM   13  C13 UNL     1       9.259  -0.750   2.258  1.00  0.00           C  
HETATM   14  C14 UNL     1       9.094   0.392   1.355  1.00  0.00           C  
HETATM   15  C15 UNL     1       8.154   1.414   1.782  1.00  0.00           C  
HETATM   16  C16 UNL     1       7.101   1.796   1.151  1.00  0.00           C  
HETATM   17  C17 UNL     1       6.620   1.289  -0.114  1.00  0.00           C  
HETATM   18  C18 UNL     1       5.180   0.790  -0.026  1.00  0.00           C  
HETATM   19  C19 UNL     1       4.711   0.279  -1.370  1.00  0.00           C  
HETATM   20  C20 UNL     1       3.257  -0.097  -1.274  1.00  0.00           C  
HETATM   21  O1  UNL     1       2.607  -0.635  -2.177  1.00  0.00           O  
HETATM   22  O2  UNL     1       2.602   0.186  -0.096  1.00  0.00           O  
HETATM   23  C21 UNL     1       1.256  -0.039   0.205  1.00  0.00           C  
HETATM   24  C22 UNL     1       1.042  -0.887   1.454  1.00  0.00           C  
HETATM   25  O3  UNL     1      -0.307  -1.025   1.774  1.00  0.00           O  
HETATM   26  C23 UNL     1      -1.251  -1.580   0.953  1.00  0.00           C  
HETATM   27  O4  UNL     1      -0.937  -2.009  -0.179  1.00  0.00           O  
HETATM   28  C24 UNL     1      -2.651  -1.644   1.468  1.00  0.00           C  
HETATM   29  C25 UNL     1      -3.401  -0.403   1.068  1.00  0.00           C  
HETATM   30  C26 UNL     1      -4.787  -0.433   1.593  1.00  0.00           C  
HETATM   31  C27 UNL     1      -5.659  -1.551   1.131  1.00  0.00           C  
HETATM   32  C28 UNL     1      -5.824  -1.521  -0.366  1.00  0.00           C  
HETATM   33  C29 UNL     1      -6.721  -2.632  -0.823  1.00  0.00           C  
HETATM   34  C30 UNL     1      -8.082  -2.547  -0.212  1.00  0.00           C  
HETATM   35  C31 UNL     1      -8.756  -1.245  -0.567  1.00  0.00           C  
HETATM   36  C32 UNL     1     -10.123  -1.140   0.035  1.00  0.00           C  
HETATM   37  C33 UNL     1     -11.077  -2.204  -0.402  1.00  0.00           C  
HETATM   38  C34 UNL     1     -11.339  -2.225  -1.871  1.00  0.00           C  
HETATM   39  C35 UNL     1     -11.931  -0.972  -2.426  1.00  0.00           C  
HETATM   40  C36 UNL     1     -13.293  -0.625  -1.810  1.00  0.00           C  
HETATM   41  C37 UNL     1     -13.733   0.642  -2.460  1.00  0.00           C  
HETATM   42  C38 UNL     1     -15.080   1.155  -1.997  1.00  0.00           C  
HETATM   43  C39 UNL     1     -15.161   1.436  -0.534  1.00  0.00           C  
HETATM   44  C40 UNL     1     -16.520   1.971  -0.190  1.00  0.00           C  
HETATM   45  C41 UNL     1     -17.638   1.046  -0.523  1.00  0.00           C  
HETATM   46  C42 UNL     1     -18.992   1.628  -0.138  1.00  0.00           C  
HETATM   47  C43 UNL     1       0.689   1.340   0.565  1.00  0.00           C  
HETATM   48  O5  UNL     1       0.835   2.202  -0.515  1.00  0.00           O  
HETATM   49  P1  UNL     1       0.234   3.733  -0.053  1.00  0.00           P  
HETATM   50  O6  UNL     1      -1.019   3.607   0.781  1.00  0.00           O  
HETATM   51  O7  UNL     1      -0.039   4.677  -1.409  1.00  0.00           O  
HETATM   52  O8  UNL     1       1.447   4.422   0.910  1.00  0.00           O  
HETATM   53  C44 UNL     1       2.218   5.353   0.238  1.00  0.00           C  
HETATM   54  C45 UNL     1       3.261   5.888   1.204  1.00  0.00           C  
HETATM   55  N1  UNL     1       2.670   6.516   2.343  1.00  0.00           N  
HETATM   56  C46 UNL     1       3.708   6.970   3.272  1.00  0.00           C  
HETATM   57  H1  UNL     1      17.393  -4.104  -3.850  1.00  0.00           H  
HETATM   58  H2  UNL     1      16.022  -2.955  -4.092  1.00  0.00           H  
HETATM   59  H3  UNL     1      15.769  -4.543  -3.278  1.00  0.00           H  
HETATM   60  H4  UNL     1      17.291  -2.072  -2.309  1.00  0.00           H  
HETATM   61  H5  UNL     1      17.487  -3.751  -1.532  1.00  0.00           H  
HETATM   62  H6  UNL     1      15.896  -2.292  -0.282  1.00  0.00           H  
HETATM   63  H7  UNL     1      15.142  -3.768  -0.955  1.00  0.00           H  
HETATM   64  H8  UNL     1      14.366  -2.344  -2.978  1.00  0.00           H  
HETATM   65  H9  UNL     1      15.177  -0.919  -2.157  1.00  0.00           H  
HETATM   66  H10 UNL     1      12.817  -0.994  -2.072  1.00  0.00           H  
HETATM   67  H11 UNL     1      13.637  -0.898  -0.487  1.00  0.00           H  
HETATM   68  H12 UNL     1      12.393  -3.419  -1.937  1.00  0.00           H  
HETATM   69  H13 UNL     1      11.710  -4.372   0.015  1.00  0.00           H  
HETATM   70  H14 UNL     1      12.989  -3.781   2.091  1.00  0.00           H  
HETATM   71  H15 UNL     1      11.477  -2.915   2.011  1.00  0.00           H  
HETATM   72  H16 UNL     1      14.350  -1.748   1.372  1.00  0.00           H  
HETATM   73  H17 UNL     1      13.628   0.227   2.221  1.00  0.00           H  
HETATM   74  H18 UNL     1      11.291   0.882   2.421  1.00  0.00           H  
HETATM   75  H19 UNL     1      11.788   0.110   3.892  1.00  0.00           H  
HETATM   76  H20 UNL     1      10.358  -1.906   3.582  1.00  0.00           H  
HETATM   77  H21 UNL     1       8.395  -1.424   2.427  1.00  0.00           H  
HETATM   78  H22 UNL     1      10.063   0.859   1.092  1.00  0.00           H  
HETATM   79  H23 UNL     1       8.789  -0.052   0.341  1.00  0.00           H  
HETATM   80  H24 UNL     1       8.362   1.929   2.767  1.00  0.00           H  
HETATM   81  H25 UNL     1       6.470   2.617   1.624  1.00  0.00           H  
HETATM   82  H26 UNL     1       7.200   0.435  -0.471  1.00  0.00           H  
HETATM   83  H27 UNL     1       6.638   2.033  -0.947  1.00  0.00           H  
HETATM   84  H28 UNL     1       4.491   1.537   0.402  1.00  0.00           H  
HETATM   85  H29 UNL     1       5.113  -0.105   0.658  1.00  0.00           H  
HETATM   86  H30 UNL     1       5.304  -0.610  -1.659  1.00  0.00           H  
HETATM   87  H31 UNL     1       4.782   1.040  -2.173  1.00  0.00           H  
HETATM   88  H32 UNL     1       0.739  -0.461  -0.657  1.00  0.00           H  
HETATM   89  H33 UNL     1       1.528  -0.384   2.331  1.00  0.00           H  
HETATM   90  H34 UNL     1       1.549  -1.888   1.316  1.00  0.00           H  
HETATM   91  H35 UNL     1      -3.142  -2.523   1.021  1.00  0.00           H  
HETATM   92  H36 UNL     1      -2.710  -1.724   2.567  1.00  0.00           H  
HETATM   93  H37 UNL     1      -2.894   0.509   1.463  1.00  0.00           H  
HETATM   94  H38 UNL     1      -3.444  -0.323  -0.061  1.00  0.00           H  
HETATM   95  H39 UNL     1      -4.734  -0.432   2.719  1.00  0.00           H  
HETATM   96  H40 UNL     1      -5.277   0.528   1.265  1.00  0.00           H  
HETATM   97  H41 UNL     1      -5.294  -2.534   1.488  1.00  0.00           H  
HETATM   98  H42 UNL     1      -6.654  -1.392   1.640  1.00  0.00           H  
HETATM   99  H43 UNL     1      -4.810  -1.640  -0.852  1.00  0.00           H  
HETATM  100  H44 UNL     1      -6.236  -0.558  -0.726  1.00  0.00           H  
HETATM  101  H45 UNL     1      -6.256  -3.621  -0.568  1.00  0.00           H  
HETATM  102  H46 UNL     1      -6.871  -2.572  -1.939  1.00  0.00           H  
HETATM  103  H47 UNL     1      -8.032  -2.646   0.882  1.00  0.00           H  
HETATM  104  H48 UNL     1      -8.709  -3.407  -0.564  1.00  0.00           H  
HETATM  105  H49 UNL     1      -8.761  -1.152  -1.672  1.00  0.00           H  
HETATM  106  H50 UNL     1      -8.147  -0.415  -0.175  1.00  0.00           H  
HETATM  107  H51 UNL     1     -10.511  -0.111  -0.109  1.00  0.00           H  
HETATM  108  H52 UNL     1      -9.998  -1.242   1.144  1.00  0.00           H  
HETATM  109  H53 UNL     1     -12.030  -2.065   0.149  1.00  0.00           H  
HETATM  110  H54 UNL     1     -10.679  -3.182  -0.094  1.00  0.00           H  
HETATM  111  H55 UNL     1     -12.083  -3.056  -2.044  1.00  0.00           H  
HETATM  112  H56 UNL     1     -10.451  -2.483  -2.468  1.00  0.00           H  
HETATM  113  H57 UNL     1     -11.246  -0.112  -2.341  1.00  0.00           H  
HETATM  114  H58 UNL     1     -12.097  -1.115  -3.520  1.00  0.00           H  
HETATM  115  H59 UNL     1     -13.219  -0.528  -0.717  1.00  0.00           H  
HETATM  116  H60 UNL     1     -14.003  -1.452  -2.025  1.00  0.00           H  
HETATM  117  H61 UNL     1     -13.873   0.415  -3.555  1.00  0.00           H  
HETATM  118  H62 UNL     1     -12.941   1.400  -2.324  1.00  0.00           H  
HETATM  119  H63 UNL     1     -15.315   2.090  -2.535  1.00  0.00           H  
HETATM  120  H64 UNL     1     -15.871   0.412  -2.256  1.00  0.00           H  
HETATM  121  H65 UNL     1     -14.979   0.518   0.072  1.00  0.00           H  
HETATM  122  H66 UNL     1     -14.389   2.179  -0.211  1.00  0.00           H  
HETATM  123  H67 UNL     1     -16.714   2.930  -0.758  1.00  0.00           H  
HETATM  124  H68 UNL     1     -16.526   2.236   0.910  1.00  0.00           H  
HETATM  125  H69 UNL     1     -17.682   0.927  -1.634  1.00  0.00           H  
HETATM  126  H70 UNL     1     -17.529   0.080  -0.038  1.00  0.00           H  
HETATM  127  H71 UNL     1     -19.089   1.712   0.949  1.00  0.00           H  
HETATM  128  H72 UNL     1     -19.762   0.961  -0.518  1.00  0.00           H  
HETATM  129  H73 UNL     1     -19.120   2.623  -0.634  1.00  0.00           H  
HETATM  130  H74 UNL     1       1.340   1.697   1.410  1.00  0.00           H  
HETATM  131  H75 UNL     1      -0.337   1.284   0.966  1.00  0.00           H  
HETATM  132  H76 UNL     1       0.633   4.438  -2.106  1.00  0.00           H  
HETATM  133  H77 UNL     1       1.545   6.166  -0.100  1.00  0.00           H  
HETATM  134  H78 UNL     1       2.711   4.881  -0.650  1.00  0.00           H  
HETATM  135  H79 UNL     1       3.879   6.640   0.667  1.00  0.00           H  
HETATM  136  H80 UNL     1       3.888   5.027   1.532  1.00  0.00           H  
HETATM  137  H81 UNL     1       2.012   5.924   2.883  1.00  0.00           H  
HETATM  138  H82 UNL     1       4.310   6.048   3.531  1.00  0.00           H  
HETATM  139  H83 UNL     1       3.277   7.316   4.229  1.00  0.00           H  
HETATM  140  H84 UNL     1       4.348   7.727   2.811  1.00  0.00           H  
CONECT    1    2   57   58   59
CONECT    2    3   60   61
CONECT    3    4   62   63
CONECT    4    5   64   65
CONECT    5    6   66   67
CONECT    6    7    7   68
CONECT    7    8   69
CONECT    8    9   70   71
CONECT    9   10   10   72
CONECT   10   11   73
CONECT   11   12   74   75
CONECT   12   13   13   76
CONECT   13   14   77
CONECT   14   15   78   79
CONECT   15   16   16   80
CONECT   16   17   81
CONECT   17   18   82   83
CONECT   18   19   84   85
CONECT   19   20   86   87
CONECT   20   21   21   22
CONECT   22   23
CONECT   23   24   47   88
CONECT   24   25   89   90
CONECT   25   26
CONECT   26   27   27   28
CONECT   28   29   91   92
CONECT   29   30   93   94
CONECT   30   31   95   96
CONECT   31   32   97   98
CONECT   32   33   99  100
CONECT   33   34  101  102
CONECT   34   35  103  104
CONECT   35   36  105  106
CONECT   36   37  107  108
CONECT   37   38  109  110
CONECT   38   39  111  112
CONECT   39   40  113  114
CONECT   40   41  115  116
CONECT   41   42  117  118
CONECT   42   43  119  120
CONECT   43   44  121  122
CONECT   44   45  123  124
CONECT   45   46  125  126
CONECT   46  127  128  129
CONECT   47   48  130  131
CONECT   48   49
CONECT   49   50   50   51   52
CONECT   51  132
CONECT   52   53
CONECT   53   54  133  134
CONECT   54   55  135  136
CONECT   55   56  137
CONECT   56  138  139  140
END

HMDB0113296
     RDKit          3D
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))
140139  0  0  0  0  0  0  0  0999 V2000
   16.4638   -3.6953   -3.3917 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.8400   -3.0565   -2.0830 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5955   -2.8122   -1.2337 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6982   -1.9129   -2.0010 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3975   -1.6006   -1.2492 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6718   -2.8254   -0.9869 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2887   -3.3655    0.1153 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4741   -2.9024    1.4926 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2401   -1.6998    1.6717 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8194   -0.5928    2.1962 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5650   -0.1928    2.7452 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3913   -1.0185    2.8899 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2586   -0.7496    2.2583 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0939    0.3925    1.3547 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1539    1.4140    1.7818 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
1-arachidoyl-2-arachidonoyl-sn-glycero-3-phosphoethanolamine-N-monomethyl	SMPDB, HMDB
PE-NMe(20:0/20:4)	SMPDB, HMDB
PE-NMe(20:0/20:4n6)	SMPDB, HMDB
PE-NMe(20:0/20:4w6)	SMPDB, HMDB
PE-NMe(40:4)	SMPDB, HMDB
MMPE(20:0/20:4(5Z,8Z,11Z,14Z))	SMPDB, HMDB
MMPE(20:0/20:4)	SMPDB, HMDB
MMPE(20:0/20:4n6)	SMPDB, HMDB
MMPE(20:0/20:4w6)	SMPDB, HMDB
MMPE(40:4)	SMPDB, HMDB
monomethylphosphatidylethanolamine	SMPDB, HMDB
N-monomethylphosphatidylethanolamine	SMPDB, HMDB
phosphatidyl-N-methylethanolamine	SMPDB, HMDB
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))	SMPDB
{2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-(icosanoyloxy)propoxy}[2-(methylamino)ethoxy]phosphinate	Generator, HMDB

Chemical Formula

C₄₆H₈₄NO₈P

Average Molecular Weight

810.151

Monoisotopic Molecular Weight

809.593455667

IUPAC Name

{2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-(icosanoyloxy)propoxy}[2-(methylamino)ethoxy]phosphinic acid

Traditional Name

2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-(icosanoyloxy)propoxy(2-(methylamino)ethoxy)phosphinic acid

CAS Registry Number

Not Available

SMILES

[H]C(COC(=O)CCCCCCCCCCCCCCCCCCC)(COP(O)(=O)OCCNC)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC

InChI Identifier

InChI=1S/C46H84NO8P/c1-4-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-38-45(48)52-42-44(43-54-56(50,51)53-41-40-47-3)55-46(49)39-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-5-2/h13,15,19,21,25,27,31,33,44,47H,4-12,14,16-18,20,22-24,26,28-30,32,34-43H2,1-3H3,(H,50,51)/b15-13-,21-19-,27-25-,33-31-

InChI Key

MYAWEMWBXNPVNK-SLLFMANOSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as monomethylphosphatidylethanolamines. These are lipids with a structure containing a glycerol moiety linked at its terminal C3 atom to a N-methylphosphoethanolamine group, and at its C1 and C2 terminal atoms by an acyl group.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Glycerophospholipids

Sub Class

Glycerophosphoethanolamines

Direct Parent

Monomethylphosphatidylethanolamines

Alternative Parents

Substituents

Monomethylphosphatidylethanolamine
Phosphoethanolamine
Fatty acid ester
Dialkyl phosphate
Dicarboxylic acid or derivatives
Organic phosphoric acid derivative
Phosphoric acid ester
Alkyl phosphate
Fatty acyl
Amino acid or derivatives
Carboxylic acid ester
Secondary amine
Secondary aliphatic amine
Carboxylic acid derivative
Organic oxygen compound
Organooxygen compound
Organonitrogen compound
Amine
Organic nitrogen compound
Organopnictogen compound
Carbonyl group
Organic oxide
Hydrocarbon derivative
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Not Available

Process

Naturally occurring process

Biological process

Biochemical pathway

Metabolic pathway

Phosphatidylcholine Biosynthesis PC(20:0/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0014580)

Role

Not Available

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	9.37	ALOGPS
logP	12.78	ChemAxon
logS	-7.4	ALOGPS
pKa (Strongest Acidic)	1.86	ChemAxon
pKa (Strongest Basic)	10.05	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	2	ChemAxon
Polar Surface Area	120.39 Å²	ChemAxon
Rotatable Bond Count	44	ChemAxon
Refractivity	237.05 m³·mol⁻¹	ChemAxon
Polarizability	100.06 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DarkChem	[M+H]+	307.541	31661259
DarkChem	[M-H]-	294.068	31661259
DeepCCS	[M+H]+	274.818	30932474
DeepCCS	[M-H]-	271.648	30932474
DeepCCS	[M-2H]-	305.91	30932474
DeepCCS	[M+Na]+	281.962	30932474
AllCCS	[M+H]+	292.2	32859911
AllCCS	[M+H-H2O]+	292.1	32859911
AllCCS	[M+NH4]+	292.1	32859911
AllCCS	[M+Na]+	292.1	32859911
AllCCS	[M-H]-	283.0	32859911
AllCCS	[M+Na-2H]-	290.2	32859911
AllCCS	[M+HCOO]-	298.0	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))	[H]C(COC(=O)CCCCCCCCCCCCCCCCCCC)(COP(O)(=O)OCCNC)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC	5271.9	Standard polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))	[H]C(COC(=O)CCCCCCCCCCCCCCCCCCC)(COP(O)(=O)OCCNC)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC	5176.7	Standard non polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z))	[H]C(COC(=O)CCCCCCCCCCCCCCCCCCC)(COP(O)(=O)OCCNC)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC	5607.5	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #1	CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCCCCCC)COP(=O)(OCCNC)O[Si](C)(C)C	5613.1	Semi standard non polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #1	CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCCCCCC)COP(=O)(OCCNC)O[Si](C)(C)C	5212.3	Standard non polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #1	CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCCCCCC)COP(=O)(OCCNC)O[Si](C)(C)C	5932.6	Standard polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #2	CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCCCCCC)COP(=O)(O)OCCN(C)[Si](C)(C)C	5821.7	Semi standard non polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #2	CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCCCCCC)COP(=O)(O)OCCN(C)[Si](C)(C)C	5040.3	Standard non polar	33892256
PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #2	CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC(COC(=O)CCCCCCCCCCCCCCCCCCC)COP(=O)(O)OCCN(C)[Si](C)(C)C	6601.0	Standard polar	33892256

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) 10V, Negative-QTOF	splash10-0pb9-1400000290-37cc0a78a1c155d358b7	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) 20V, Negative-QTOF	splash10-0w4i-5916150020-4df402b5c04dc54dc21f	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) 40V, Negative-QTOF	splash10-0fb9-9512000000-efce819bc63e7b896c8a	2021-09-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) 10V, Positive-QTOF	splash10-03di-5100004490-760b4946fe5fbf8d4e51	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) 20V, Positive-QTOF	splash10-0a4i-8100009300-6d7685a448004f0fc78b	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) 40V, Positive-QTOF	splash10-0a4i-6921000000-23cb952e632a151cc550	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Pathways

Name	SMPDB/PathBank	KEGG
Phosphatidylcholine Biosynthesis PC(20:0/20:4(5Z,8Z,11Z,14Z))		Not Available

Normal Concentrations

Not Available

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131820408

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Showing metabocard for PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)) (HMDB0113296)

MOL for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

3D MOL for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

3D SDF for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

3D-SDF for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

PDB for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

3D PDB for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

SMILES for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

INCHI for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

Structure for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

3D Structure for HMDB0113296 (PE-NMe(20:0/20:4(5Z,8Z,11Z,14Z)))

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

MS/MS Spectra