Record Information |
---|
Version | 5.0 |
---|
Status | Expected but not Quantified |
---|
Creation Date | 2017-09-09 08:32:55 UTC |
---|
Update Date | 2022-11-30 19:26:40 UTC |
---|
HMDB ID | HMDB0116575 |
---|
Secondary Accession Numbers | None |
---|
Metabolite Identification |
---|
Common Name | PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) |
---|
Description | PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) is a phosphatidylglycerol - a glycerophospholipid in which a phosphoglycerol moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidylglycerols can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)), in particular, consists of one chain of linoleic acid at the C-1 position and one chain of eicosatetraenoic acid at the C-2 position. Phosphatidylglycerol is present at a level of 1-2% in most animal tissues, but it can be the second most abundant phospholipid in lung surfactant (up to 11% of the total). It is well established that the concentration of phosphatidylglycerol increases during fetal development. Phosphatidylglycerol may be present in animal tissues merely as a precursor for cardiolipin synthesis. |
---|
Structure | [H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/C\C=C/CC InChI=1S/C44H75O10P/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-44(48)54-42(40-53-55(49,50)52-38-41(46)37-45)39-51-43(47)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h5,7,11-14,17-19,21-22,24,41-42,45-46H,3-4,6,8-10,15-16,20,23,25-40H2,1-2H3,(H,49,50)/b7-5-,13-11-,14-12-,19-17-,21-18-,24-22-/t41-,42+/m0/s1 |
---|
Synonyms | Value | Source |
---|
1-linoleoyl-2-eicosatetraenoyl-sn-glycero-3-phospho-(1'-glycerol) | SMPDB, HMDB | 1-linoleoyl-2-eicosatetraenoyl-sn-glycero-3-phosphoglycerol | SMPDB, HMDB | PG(18:2/20:4) | SMPDB, HMDB | PG(18:2n6/20:4n3) | SMPDB, HMDB | PG(18:2w6/20:4w3) | SMPDB, HMDB | PG(38:6) | SMPDB, HMDB | Phosphatidylglycerol(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) | SMPDB, HMDB | Phosphatidylglycerol(18:2/20:4) | SMPDB, HMDB | Phosphatidylglycerol(18:2n6/20:4n3) | SMPDB, HMDB | Phosphatidylglycerol(18:2w6/20:4w3) | SMPDB, HMDB | Phosphatidylglycerol(38:6) | SMPDB, HMDB | PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) | SMPDB | 1-linoleoyl-2-eicsoatetraenoyl-sn-glycero-3-phosphoglycerol | Lipid Annotator, HMDB | GPG(18:2/20:4) | Lipid Annotator, HMDB | PG(18:2/20:4) | Lipid Annotator | Phosphatidylglycerol(18:2/20:4) | Lipid Annotator | 1-(9Z,12Z-octadecadienoyl)-2-(8Z,11Z,14Z,17Z-eicosapentaenoyl)-sn-glycero-3-phospho-(1'-glycerol) | Lipid Annotator, HMDB | PG(38:6) | Lipid Annotator | 1-(9Z,12Z-octadecadienoyl)-2-(8Z,11Z,14Z,17Z-eicosapentaenoyl)-sn-glycero-3-phosphoglycerol | Lipid Annotator, HMDB | GPG(38:6) | Lipid Annotator, HMDB | [(2S)-2,3-Dihydroxypropoxy][(2R)-2-[(8Z,11Z)-icosa-8,11,14,17-tetraenoyloxy]-3-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propoxy]phosphinate | Generator, HMDB |
|
---|
Chemical Formula | C44H75O10P |
---|
Average Molecular Weight | 795.048 |
---|
Monoisotopic Molecular Weight | 794.509785613 |
---|
IUPAC Name | [(2S)-2,3-dihydroxypropoxy][(2R)-2-[(8Z,11Z,14Z,17Z)-icosa-8,11,14,17-tetraenoyloxy]-3-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propoxy]phosphinic acid |
---|
Traditional Name | (2S)-2,3-dihydroxypropoxy((2R)-2-[(8Z,11Z,14Z,17Z)-icosa-8,11,14,17-tetraenoyloxy]-3-[(9Z,12Z)-octadeca-9,12-dienoyloxy]propoxy)phosphinic acid |
---|
CAS Registry Number | Not Available |
---|
SMILES | [H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/C\C=C/CC |
---|
InChI Identifier | InChI=1S/C44H75O10P/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-44(48)54-42(40-53-55(49,50)52-38-41(46)37-45)39-51-43(47)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h5,7,11-14,17-19,21-22,24,41-42,45-46H,3-4,6,8-10,15-16,20,23,25-40H2,1-2H3,(H,49,50)/b7-5-,13-11-,14-12-,19-17-,21-18-,24-22-/t41-,42+/m0/s1 |
---|
InChI Key | IOSMTWQOMVSNAG-MBPIGMARSA-N |
---|
Chemical Taxonomy |
---|
Description | Belongs to the class of organic compounds known as phosphatidylglycerols. These are glycerophosphoglycerols in which two fatty acids are bonded to the 1-glycerol moiety through ester linkages. As is the case with diacylglycerols, phosphatidylglycerols can have many different combinations of fatty acids of varying lengths and saturation attached to the C-1 and C-2 positions. |
---|
Kingdom | Organic compounds |
---|
Super Class | Lipids and lipid-like molecules |
---|
Class | Glycerophospholipids |
---|
Sub Class | Glycerophosphoglycerols |
---|
Direct Parent | Phosphatidylglycerols |
---|
Alternative Parents | |
---|
Substituents | - 1,2-diacylglycerophosphoglycerol
- Fatty acid ester
- Dialkyl phosphate
- Dicarboxylic acid or derivatives
- Organic phosphoric acid derivative
- Phosphoric acid ester
- Alkyl phosphate
- Fatty acyl
- 1,2-diol
- Carboxylic acid ester
- Secondary alcohol
- Carboxylic acid derivative
- Organic oxide
- Organooxygen compound
- Alcohol
- Organic oxygen compound
- Primary alcohol
- Carbonyl group
- Hydrocarbon derivative
- Aliphatic acyclic compound
|
---|
Molecular Framework | Aliphatic acyclic compounds |
---|
External Descriptors | Not Available |
---|
Ontology |
---|
Physiological effect | Not Available |
---|
Disposition | Not Available |
---|
Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0029477)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0085414)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0085415)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/22:0) (PathBank: SMP0099826)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)/22:1(13Z)) (PathBank: SMP0099827)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/22:0/22:0) (PathBank: SMP0099828)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/22:0/22:1(13Z)) (PathBank: SMP0099829)
- Cardiolipin Biosynthesis CL(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)/22:1(13Z)/22:1(13Z)) (PathBank: SMP0099830)
|
---|
Role | Not Available |
---|
Physical Properties |
---|
State | Solid |
---|
Experimental Molecular Properties | Property | Value | Reference |
---|
Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
|
---|
Experimental Chromatographic Properties | Not Available |
---|
Predicted Molecular Properties | |
---|
Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
---|
PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) | [H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/C\C=C/CC | 5476.9 | Standard polar | 33892256 | PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) | [H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/C\C=C/CC | 4733.1 | Standard non polar | 33892256 | PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) | [H][C@](O)(CO)COP(O)(=O)OC[C@@]([H])(COC(=O)CCCCCCC\C=C/C\C=C/CCCCC)OC(=O)CCCCCC\C=C/C\C=C/C\C=C/C\C=C/CC | 5601.6 | Semi standard non polar | 33892256 |
|
---|
| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
---|
Predicted GC-MS | Predicted GC-MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-10-19 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-10-19 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) GC-MS (TMS_1_3) - 70eV, Positive | Not Available | 2021-10-19 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
---|
Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 10V, Positive-QTOF | splash10-004s-3091322700-177955ee6c9df51f6def | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 20V, Positive-QTOF | splash10-004r-4191211300-af58fdb336a90db4ff3c | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 40V, Positive-QTOF | splash10-0a4r-8094202100-4b0d04c1dedf1676a5f9 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 10V, Negative-QTOF | splash10-0h00-0192110400-7bec53fa9a068c90f51a | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 20V, Negative-QTOF | splash10-004i-5290100100-9647545363c8d56eefb3 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 40V, Negative-QTOF | splash10-004i-9020000000-9787334db4a33c8e44f3 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 10V, Negative-QTOF | splash10-0006-0000000900-56aeff663cc038761162 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 20V, Negative-QTOF | splash10-0ufu-0199440900-07440b470b43a225468e | 2021-09-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PG(18:2(9Z,12Z)/20:4(8Z,11Z,14Z,17Z)) 40V, Negative-QTOF | splash10-0ufu-0399440900-8033371ef91b72fbde3a | 2021-09-23 | Wishart Lab | View Spectrum |
|
---|