Record Information |
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Version | 5.0 |
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Status | Detected but not Quantified |
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Creation Date | 2021-09-01 15:59:06 UTC |
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Update Date | 2021-09-26 22:48:59 UTC |
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HMDB ID | HMDB0242548 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal |
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Description | 2-fluoro-3,4,5,6-tetrahydroxyhexanal belongs to the class of organic compounds known as beta-hydroxy aldehydes. These are organic compounds containing an aldehyde substituted with a hydroxy group on the second carbon atom. Based on a literature review very few articles have been published on 2-fluoro-3,4,5,6-tetrahydroxyhexanal. This compound has been identified in human blood as reported by (PMID: 31557052 ). (2r,3s,4r,5r)-2-fluoro-3,4,5,6-tetrahydroxyhexanal is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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Structure | InChI=1S/C6H11FO5/c7-3(1-8)5(11)6(12)4(10)2-9/h1,3-6,9-12H,2H2 |
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Synonyms | Value | Source |
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2-Fluoro-2-deoxy-D-mannose | MeSH |
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Chemical Formula | C6H11FO5 |
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Average Molecular Weight | 182.147 |
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Monoisotopic Molecular Weight | 182.059051617 |
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IUPAC Name | 2-fluoro-3,4,5,6-tetrahydroxyhexanal |
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Traditional Name | 2-fluoro-3,4,5,6-tetrahydroxyhexanal |
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CAS Registry Number | Not Available |
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SMILES | OCC(O)C(O)C(O)C(F)C=O |
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InChI Identifier | InChI=1S/C6H11FO5/c7-3(1-8)5(11)6(12)4(10)2-9/h1,3-6,9-12H,2H2 |
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InChI Key | AOYNUTHNTBLRMT-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as beta-hydroxy aldehydes. These are organic compounds containing an aldehyde substituted with a hydroxy group on the second carbon atom. |
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Kingdom | Organic compounds |
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Super Class | Organic oxygen compounds |
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Class | Organooxygen compounds |
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Sub Class | Carbonyl compounds |
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Direct Parent | Beta-hydroxy aldehydes |
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Alternative Parents | |
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Substituents | - Beta-hydroxy aldehyde
- Secondary alcohol
- Halohydrin
- Fluorohydrin
- 1,2-diol
- Polyol
- Organic oxide
- Hydrocarbon derivative
- Primary alcohol
- Organofluoride
- Organohalogen compound
- Alkyl halide
- Alkyl fluoride
- Alcohol
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
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(2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal | OCC(O)C(O)C(O)C(F)C=O | 3055.5 | Standard polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal | OCC(O)C(O)C(O)C(F)C=O | 1386.1 | Standard non polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal | OCC(O)C(O)C(O)C(F)C=O | 1569.2 | Semi standard non polar | 33892256 |
DerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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(2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal,5TMS,isomer #1 | C[Si](C)(C)OC=C(F)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)O[Si](C)(C)C | 1766.1 | Semi standard non polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal,5TMS,isomer #1 | C[Si](C)(C)OC=C(F)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)O[Si](C)(C)C | 1826.0 | Standard non polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal,5TMS,isomer #1 | C[Si](C)(C)OC=C(F)C(O[Si](C)(C)C)C(O[Si](C)(C)C)C(CO[Si](C)(C)C)O[Si](C)(C)C | 1752.4 | Standard polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal,5TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC=C(F)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 2763.7 | Semi standard non polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal,5TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC=C(F)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 2722.4 | Standard non polar | 33892256 | (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal,5TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC=C(F)C(O[Si](C)(C)C(C)(C)C)C(O[Si](C)(C)C(C)(C)C)C(CO[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C | 2307.9 | Standard polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (Non-derivatized) - 70eV, Positive | splash10-08ml-9300000000-94f9f3474aed2bf041ce | 2021-09-24 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_1_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_1_4) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_1_5) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_4) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_5) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_6) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_7) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_8) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_9) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_2_10) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_3) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_4) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_5) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_6) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_7) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal GC-MS (TMS_3_8) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal 10V, Positive-QTOF | splash10-0gir-3900000000-6f4583621cbe75af5493 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal 20V, Positive-QTOF | splash10-022d-9100000000-277276d77eaa36f93cc7 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal 40V, Positive-QTOF | splash10-01ow-9000000000-b29b5321beed566abb55 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal 10V, Negative-QTOF | splash10-0006-9100000000-6b18f499f946cf174ad6 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal 20V, Negative-QTOF | splash10-066r-9000000000-aefcb088028cbcf583d5 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - (2R,3S,4R,5R)-2-Fluoro-3,4,5,6-tetrahydroxyhexanal 40V, Negative-QTOF | splash10-05mo-9000000000-51376ae60c72c89f9228 | 2021-10-12 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum |
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