Record Information |
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Version | 5.0 |
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Status | Detected but not Quantified |
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Creation Date | 2021-09-10 22:04:29 UTC |
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Update Date | 2021-09-26 22:53:05 UTC |
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HMDB ID | HMDB0244956 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | 2-(Pyridin-2-ylamino)acetic acid |
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Description | 2-(Pyridin-2-ylamino)acetic acid, also known as N-(2-pyridyl)glycine or NPD-glycine, belongs to the class of organic compounds known as alpha amino acids and derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon), or a derivative thereof. Based on a literature review very few articles have been published on 2-(Pyridin-2-ylamino)acetic acid. This compound has been identified in human blood as reported by (PMID: 31557052 ). 2-(pyridin-2-ylamino)acetic acid is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 2-(Pyridin-2-ylamino)acetic acid is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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Structure | InChI=1S/C7H8N2O2/c10-7(11)5-9-6-3-1-2-4-8-6/h1-4H,5H2,(H,8,9)(H,10,11) |
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Synonyms | Value | Source |
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2-(Pyridin-2-ylamino)acetate | Generator | N-(2-Pyridyl)glycine | HMDB | NPD-Glycine | HMDB |
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Chemical Formula | C7H8N2O2 |
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Average Molecular Weight | 152.153 |
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Monoisotopic Molecular Weight | 152.058577506 |
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IUPAC Name | 2-[(pyridin-2-yl)amino]acetic acid |
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Traditional Name | (pyridin-2-ylamino)acetic acid |
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CAS Registry Number | Not Available |
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SMILES | OC(=O)CNC1=CC=CC=N1 |
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InChI Identifier | InChI=1S/C7H8N2O2/c10-7(11)5-9-6-3-1-2-4-8-6/h1-4H,5H2,(H,8,9)(H,10,11) |
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InChI Key | VWSWWWOLLQGVGN-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as alpha amino acids and derivatives. These are amino acids in which the amino group is attached to the carbon atom immediately adjacent to the carboxylate group (alpha carbon), or a derivative thereof. |
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Kingdom | Organic compounds |
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Super Class | Organic acids and derivatives |
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Class | Carboxylic acids and derivatives |
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Sub Class | Amino acids, peptides, and analogues |
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Direct Parent | Alpha amino acids and derivatives |
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Alternative Parents | |
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Substituents | - Alpha-amino acid or derivatives
- Aminopyridine
- Secondary aliphatic/aromatic amine
- Pyridine
- Imidolactam
- Heteroaromatic compound
- Amino acid
- Carboxylic acid
- Monocarboxylic acid or derivatives
- Secondary amine
- Organoheterocyclic compound
- Azacycle
- Organopnictogen compound
- Organooxygen compound
- Organonitrogen compound
- Amine
- Organic nitrogen compound
- Organic oxide
- Organic oxygen compound
- Hydrocarbon derivative
- Carbonyl group
- Aromatic heteromonocyclic compound
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Molecular Framework | Aromatic heteromonocyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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2-(Pyridin-2-ylamino)acetic acid,2TMS,isomer #1 | C[Si](C)(C)OC(=O)CN(C1=CC=CC=N1)[Si](C)(C)C | 1543.1 | Semi standard non polar | 33892256 | 2-(Pyridin-2-ylamino)acetic acid,2TMS,isomer #1 | C[Si](C)(C)OC(=O)CN(C1=CC=CC=N1)[Si](C)(C)C | 1611.8 | Standard non polar | 33892256 | 2-(Pyridin-2-ylamino)acetic acid,2TMS,isomer #1 | C[Si](C)(C)OC(=O)CN(C1=CC=CC=N1)[Si](C)(C)C | 1943.5 | Standard polar | 33892256 | 2-(Pyridin-2-ylamino)acetic acid,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)CN(C1=CC=CC=N1)[Si](C)(C)C(C)(C)C | 1972.5 | Semi standard non polar | 33892256 | 2-(Pyridin-2-ylamino)acetic acid,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)CN(C1=CC=CC=N1)[Si](C)(C)C(C)(C)C | 2041.0 | Standard non polar | 33892256 | 2-(Pyridin-2-ylamino)acetic acid,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OC(=O)CN(C1=CC=CC=N1)[Si](C)(C)C(C)(C)C | 2211.0 | Standard polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid GC-MS (Non-derivatized) - 70eV, Positive | splash10-0a4i-1900000000-8c7604b53b2d3f00d5bd | 2021-09-23 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid GC-MS (TBDMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid 10V, Positive-QTOF | splash10-0f79-0900000000-63a1e26e7194fd255438 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid 20V, Positive-QTOF | splash10-0a4i-1900000000-5b7a664b8e95160c2d11 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid 40V, Positive-QTOF | splash10-001i-9100000000-af2f768b040ca4c5af77 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid 10V, Negative-QTOF | splash10-0a4i-0900000000-e75a89fd97c681c13b2d | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid 20V, Negative-QTOF | splash10-0a4i-0900000000-80c6e665a559305960eb | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 2-(Pyridin-2-ylamino)acetic acid 40V, Negative-QTOF | splash10-056r-9300000000-a650587917b16240abfe | 2021-10-12 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-10-12 | Wishart Lab | View Spectrum |
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