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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-10 22:14:57 UTC
Update Date2021-09-26 22:53:26 UTC
HMDB IDHMDB0245149
Secondary Accession NumbersNone
Metabolite Identification
Common Name2-Hydroxyacetamide
Description2-Hydroxyacetamide, also known as glycolamide, belongs to the class of organic compounds known as primary carboxylic acid amides. Primary carboxylic acid amides are compounds comprising primary carboxylic acid amide functional group, with the general structure RC(=O)NH2. Based on a literature review very few articles have been published on 2-Hydroxyacetamide. This compound has been identified in human blood as reported by (PMID: 31557052 ). 2-hydroxyacetamide is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 2-Hydroxyacetamide is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
Synonyms
ValueSource
2-Hydroxyacetimidic acidChEBI
GlycolamideChEBI
GlycollamideChEBI
2-HydroxyacetimidateGenerator
Chemical FormulaC2H5NO2
Average Molecular Weight75.067
Monoisotopic Molecular Weight75.032028405
IUPAC Name2-hydroxyacetamide
Traditional Nameglycolamide
CAS Registry NumberNot Available
SMILES
NC(=O)CO
InChI Identifier
InChI=1S/C2H5NO2/c3-2(5)1-4/h4H,1H2,(H2,3,5)
InChI KeyTZGPACAKMCUCKX-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as primary carboxylic acid amides. Primary carboxylic acid amides are compounds comprising primary carboxylic acid amide functional group, with the general structure RC(=O)NH2.
KingdomOrganic compounds
Super ClassOrganic acids and derivatives
ClassCarboxylic acids and derivatives
Sub ClassCarboxylic acid derivatives
Direct ParentPrimary carboxylic acid amides
Alternative Parents
Substituents
  • Primary carboxylic acid amide
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Organic oxide
  • Hydrocarbon derivative
  • Primary alcohol
  • Organooxygen compound
  • Organonitrogen compound
  • Carbonyl group
  • Alcohol
  • Aliphatic acyclic compound
Molecular FrameworkAliphatic acyclic compounds
External Descriptors
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP-1.7ALOGPS
logP-1.8ChemAxon
logS0.93ALOGPS
pKa (Strongest Acidic)13.65ChemAxon
pKa (Strongest Basic)-3.4ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count2ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area63.32 ŲChemAxon
Rotatable Bond Count1ChemAxon
Refractivity16.17 m³·mol⁻¹ChemAxon
Polarizability6.61 ųChemAxon
Number of Rings0ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M+H]+124.91830932474
DeepCCS[M-H]-122.12130932474
DeepCCS[M-2H]-158.42930932474
DeepCCS[M+Na]+133.09430932474
AllCCS[M+H]+122.732859911
AllCCS[M+H-H2O]+118.232859911
AllCCS[M+NH4]+126.932859911
AllCCS[M+Na]+128.132859911
AllCCS[M-H]-126.332859911
AllCCS[M+Na-2H]-131.932859911
AllCCS[M+HCOO]-138.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2-HydroxyacetamideNC(=O)CO2023.6Standard polar33892256
2-HydroxyacetamideNC(=O)CO811.2Standard non polar33892256
2-HydroxyacetamideNC(=O)CO988.4Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
2-Hydroxyacetamide,2TMS,isomer #1C[Si](C)(C)NC(=O)CO[Si](C)(C)C1179.6Semi standard non polar33892256
2-Hydroxyacetamide,2TMS,isomer #1C[Si](C)(C)NC(=O)CO[Si](C)(C)C1161.1Standard non polar33892256
2-Hydroxyacetamide,2TMS,isomer #1C[Si](C)(C)NC(=O)CO[Si](C)(C)C1291.1Standard polar33892256
2-Hydroxyacetamide,2TMS,isomer #2C[Si](C)(C)N(C(=O)CO)[Si](C)(C)C1217.0Semi standard non polar33892256
2-Hydroxyacetamide,2TMS,isomer #2C[Si](C)(C)N(C(=O)CO)[Si](C)(C)C1163.7Standard non polar33892256
2-Hydroxyacetamide,2TMS,isomer #2C[Si](C)(C)N(C(=O)CO)[Si](C)(C)C1412.1Standard polar33892256
2-Hydroxyacetamide,3TMS,isomer #1C[Si](C)(C)OCC(=O)N([Si](C)(C)C)[Si](C)(C)C1305.3Semi standard non polar33892256
2-Hydroxyacetamide,3TMS,isomer #1C[Si](C)(C)OCC(=O)N([Si](C)(C)C)[Si](C)(C)C1263.0Standard non polar33892256
2-Hydroxyacetamide,3TMS,isomer #1C[Si](C)(C)OCC(=O)N([Si](C)(C)C)[Si](C)(C)C1263.0Standard polar33892256
2-Hydroxyacetamide,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(=O)CO[Si](C)(C)C(C)(C)C1601.0Semi standard non polar33892256
2-Hydroxyacetamide,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(=O)CO[Si](C)(C)C(C)(C)C1557.1Standard non polar33892256
2-Hydroxyacetamide,2TBDMS,isomer #1CC(C)(C)[Si](C)(C)NC(=O)CO[Si](C)(C)C(C)(C)C1553.5Standard polar33892256
2-Hydroxyacetamide,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C(=O)CO)[Si](C)(C)C(C)(C)C1617.1Semi standard non polar33892256
2-Hydroxyacetamide,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C(=O)CO)[Si](C)(C)C(C)(C)C1590.7Standard non polar33892256
2-Hydroxyacetamide,2TBDMS,isomer #2CC(C)(C)[Si](C)(C)N(C(=O)CO)[Si](C)(C)C(C)(C)C1581.4Standard polar33892256
2-Hydroxyacetamide,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C1928.7Semi standard non polar33892256
2-Hydroxyacetamide,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C1900.9Standard non polar33892256
2-Hydroxyacetamide,3TBDMS,isomer #1CC(C)(C)[Si](C)(C)OCC(=O)N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C1671.7Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyacetamide GC-MS (Non-derivatized) - 70eV, Positivesplash10-002f-9000000000-3d56979298b9245a25502021-09-23Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyacetamide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyacetamide GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyacetamide GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyacetamide GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Hydroxyacetamide GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyacetamide 10V, Positive-QTOFsplash10-0a6r-9000000000-6be76b02e2e8c982b6322021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyacetamide 20V, Positive-QTOFsplash10-052f-9000000000-67d7e7cde6a2be1eaa472021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyacetamide 40V, Positive-QTOFsplash10-0006-9000000000-8fa8a9371e57683cd3762021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyacetamide 10V, Negative-QTOFsplash10-00dl-9000000000-ed726d2ea603a67852f42021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyacetamide 20V, Negative-QTOFsplash10-006x-9000000000-13d50e0215e14ed194a82021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Hydroxyacetamide 40V, Negative-QTOFsplash10-0006-9000000000-90726b17dc36e29c52992021-10-12Wishart LabView Spectrum

NMR Spectra

Spectrum TypeDescriptionDeposition DateSourceView
Predicted 1D NMR13C NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 100 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 1000 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 200 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 300 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 400 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 500 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 600 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 700 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 800 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR13C NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Predicted 1D NMR1H NMR Spectrum (1D, 900 MHz, D2O, predicted)2021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID10782936
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound69021
PDB IDNot Available
ChEBI ID30321
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]