Hmdb loader
Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-10 22:22:17 UTC
Update Date2021-09-26 22:53:40 UTC
HMDB IDHMDB0245284
Secondary Accession NumbersNone
Metabolite Identification
Common Name2-Oxo-3-hydroxy-lysergide
Description2-Oxo-3-hydroxy-lysergide belongs to the class of organic compounds known as lysergic acids and derivatives. These are alkaloids with a structure based on the lysergic acid skeleton. Based on a literature review very few articles have been published on 2-Oxo-3-hydroxy-lysergide. This compound has been identified in human blood as reported by (PMID: 31557052 ). 2-oxo-3-hydroxy-lysergide is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 2-Oxo-3-hydroxy-lysergide is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
Thumb
SynonymsNot Available
Chemical FormulaC20H25N3O3
Average Molecular Weight355.438
Monoisotopic Molecular Weight355.189591677
IUPAC NameN,N-diethyl-9-hydroxy-6-methyl-10-oxo-6,11-diazatetracyclo[7.6.1.0^{2,7}.0^{12,16}]hexadeca-1(16),2,12,14-tetraene-4-carboxamide
Traditional NameN,N-diethyl-9-hydroxy-6-methyl-10-oxo-6,11-diazatetracyclo[7.6.1.0^{2,7}.0^{12,16}]hexadeca-1(16),2,12,14-tetraene-4-carboxamide
CAS Registry NumberNot Available
SMILES
CCN(CC)C(=O)C1CN(C)C2CC3(O)C(=O)NC4=CC=CC(=C34)C2=C1
InChI Identifier
InChI=1S/C20H25N3O3/c1-4-23(5-2)18(24)12-9-14-13-7-6-8-15-17(13)20(26,19(25)21-15)10-16(14)22(3)11-12/h6-9,12,16,26H,4-5,10-11H2,1-3H3,(H,21,25)
InChI KeyYSZSHHCNLVHCNV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as lysergic acids and derivatives. These are alkaloids with a structure based on the lysergic acid skeleton.
KingdomOrganic compounds
Super ClassAlkaloids and derivatives
ClassErgoline and derivatives
Sub ClassLysergic acids and derivatives
Direct ParentLysergic acids and derivatives
Alternative Parents
Substituents
  • Lysergic acid or derivatives
  • 6,7-secoergoline
  • Benzoquinoline
  • Quinoline-3-carboxamide
  • Isoindolone
  • Tetralin
  • Quinoline
  • Indole or derivatives
  • Dihydroindole
  • Isoindole or derivatives
  • Aralkylamine
  • Benzenoid
  • Tertiary carboxylic acid amide
  • Tertiary alcohol
  • Secondary carboxylic acid amide
  • Tertiary amine
  • Tertiary aliphatic amine
  • Carboxamide group
  • Amino acid or derivatives
  • Lactam
  • Carboxylic acid derivative
  • Azacycle
  • Organoheterocyclic compound
  • Alcohol
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Carbonyl group
  • Organic oxide
  • Organic oxygen compound
  • Amine
  • Organooxygen compound
  • Organonitrogen compound
  • Aromatic heteropolycyclic compound
Molecular FrameworkAromatic heteropolycyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
PropertyValueSource
logP1.84ALOGPS
logP0.49ChemAxon
logS-2ALOGPS
pKa (Strongest Acidic)11.56ChemAxon
pKa (Strongest Basic)8.27ChemAxon
Physiological Charge1ChemAxon
Hydrogen Acceptor Count4ChemAxon
Hydrogen Donor Count2ChemAxon
Polar Surface Area72.88 ŲChemAxon
Rotatable Bond Count3ChemAxon
Refractivity102.06 m³·mol⁻¹ChemAxon
Polarizability38.67 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityYesChemAxon
Rule of FiveYesChemAxon
Ghose FilterYesChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleNoChemAxon
Predicted Chromatographic Properties

Predicted Collision Cross Sections

PredictorAdduct TypeCCS Value (Å2)Reference
DeepCCS[M-2H]-222.30130932474
DeepCCS[M+Na]+197.52930932474
AllCCS[M+H]+185.032859911
AllCCS[M+H-H2O]+182.132859911
AllCCS[M+NH4]+187.632859911
AllCCS[M+Na]+188.332859911
AllCCS[M-H]-188.632859911
AllCCS[M+Na-2H]-188.732859911
AllCCS[M+HCOO]-189.032859911

Predicted Kovats Retention Indices

Underivatized

MetaboliteSMILESKovats RI ValueColumn TypeReference
2-Oxo-3-hydroxy-lysergideCCN(CC)C(=O)C1CN(C)C2CC3(O)C(=O)NC4=CC=CC(=C34)C2=C14450.6Standard polar33892256
2-Oxo-3-hydroxy-lysergideCCN(CC)C(=O)C1CN(C)C2CC3(O)C(=O)NC4=CC=CC(=C34)C2=C13219.5Standard non polar33892256
2-Oxo-3-hydroxy-lysergideCCN(CC)C(=O)C1CN(C)C2CC3(O)C(=O)NC4=CC=CC(=C34)C2=C13281.7Semi standard non polar33892256

Derivatized

Derivative Name / StructureSMILESKovats RI ValueColumn TypeReference
2-Oxo-3-hydroxy-lysergide,2TMS,isomer #1CCN(CC)C(=O)C1C=C2C3=CC=CC4=C3C(O[Si](C)(C)C)(CC2N(C)C1)C(=O)N4[Si](C)(C)C3011.4Semi standard non polar33892256
2-Oxo-3-hydroxy-lysergide,2TMS,isomer #1CCN(CC)C(=O)C1C=C2C3=CC=CC4=C3C(O[Si](C)(C)C)(CC2N(C)C1)C(=O)N4[Si](C)(C)C2954.6Standard non polar33892256
2-Oxo-3-hydroxy-lysergide,2TMS,isomer #1CCN(CC)C(=O)C1C=C2C3=CC=CC4=C3C(O[Si](C)(C)C)(CC2N(C)C1)C(=O)N4[Si](C)(C)C3596.2Standard polar33892256
2-Oxo-3-hydroxy-lysergide,2TBDMS,isomer #1CCN(CC)C(=O)C1C=C2C3=CC=CC4=C3C(O[Si](C)(C)C(C)(C)C)(CC2N(C)C1)C(=O)N4[Si](C)(C)C(C)(C)C3432.3Semi standard non polar33892256
2-Oxo-3-hydroxy-lysergide,2TBDMS,isomer #1CCN(CC)C(=O)C1C=C2C3=CC=CC4=C3C(O[Si](C)(C)C(C)(C)C)(CC2N(C)C1)C(=O)N4[Si](C)(C)C(C)(C)C3439.3Standard non polar33892256
2-Oxo-3-hydroxy-lysergide,2TBDMS,isomer #1CCN(CC)C(=O)C1C=C2C3=CC=CC4=C3C(O[Si](C)(C)C(C)(C)C)(CC2N(C)C1)C(=O)N4[Si](C)(C)C(C)(C)C3718.4Standard polar33892256
Spectra

GC-MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted GC-MSPredicted GC-MS Spectrum - 2-Oxo-3-hydroxy-lysergide GC-MS (Non-derivatized) - 70eV, Positivesplash10-0a6r-4295000000-7a35351a7ecee3361e132021-09-24Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Oxo-3-hydroxy-lysergide GC-MS (Non-derivatized) - 70eV, PositiveNot Available2021-10-12Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Oxo-3-hydroxy-lysergide GC-MS (TMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Oxo-3-hydroxy-lysergide GC-MS (TMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Oxo-3-hydroxy-lysergide GC-MS (TBDMS_1_1) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum
Predicted GC-MSPredicted GC-MS Spectrum - 2-Oxo-3-hydroxy-lysergide GC-MS (TBDMS_1_2) - 70eV, PositiveNot Available2021-11-03Wishart LabView Spectrum

MS/MS Spectra

Spectrum TypeDescriptionSplash KeyDeposition DateSourceView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Oxo-3-hydroxy-lysergide 10V, Positive-QTOFsplash10-0a4i-0019000000-6441f1a8bc909c1377222021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Oxo-3-hydroxy-lysergide 20V, Positive-QTOFsplash10-0a4i-0069000000-9062b203afed4fc110e92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Oxo-3-hydroxy-lysergide 40V, Positive-QTOFsplash10-0a4i-0190000000-a73211ee9d28d0c60fb52021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Oxo-3-hydroxy-lysergide 10V, Negative-QTOFsplash10-0udi-0009000000-5f02b088498f9fe169e92021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Oxo-3-hydroxy-lysergide 20V, Negative-QTOFsplash10-0udi-0009000000-cd3ba4f0156d7ac30b782021-10-12Wishart LabView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrum - 2-Oxo-3-hydroxy-lysergide 40V, Negative-QTOFsplash10-0uk9-5298000000-3537a1a61d9b6f4d67932021-10-12Wishart LabView Spectrum
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID19205126
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem Compound20577586
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]