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Showing metabocard for 2,2,6,6-Tetramethyl-4-piperidinol (HMDB0245344)

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Record Information
Version5.0
StatusDetected but not Quantified
Creation Date2021-09-10 22:25:25 UTC
Update Date2021-09-26 22:53:46 UTC
HMDB IDHMDB0245344
Secondary Accession NumbersNone
Metabolite Identification
Common Name2,2,6,6-Tetramethyl-4-piperidinol
Description2,2,6,6-tetramethylpiperidin-4-ol belongs to the class of organic compounds known as piperidines. Piperidines are compounds containing a piperidine ring, which is a saturated aliphatic six-member ring with one nitrogen atom and five carbon atoms. Based on a literature review very few articles have been published on 2,2,6,6-tetramethylpiperidin-4-ol. This compound has been identified in human blood as reported by (PMID: 31557052 ). 2,2,6,6-tetramethyl-4-piperidinol is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 2,2,6,6-Tetramethyl-4-piperidinol is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.
Structure
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MOL3D MOLSDF3D SDFPDB3D PDBSMILESInChI

MOL for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

  Mrv1572004191604392D          

 11 11  0  0  0  0            999 V2000
   -0.2822   -0.7752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8125    0.1433    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2448    1.8695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1842    1.8695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  7  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  1  1  0  0  0  0
  8  2  1  0  0  0  0
  8  5  1  0  0  0  0
  9  3  1  0  0  0  0
  9  4  1  0  0  0  0
  9  6  1  0  0  0  0
 10  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11  7  1  0  0  0  0
M  END
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3D MOL for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

HMDB0245344
     RDKit          3D
2,2,6,6-Tetramethyl-4-piperidinol
 30 30  0  0  0  0  0  0  0  0999 V2000
    1.7394    0.0891    1.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2350   -0.2243   -0.0481 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4007   -0.8889   -0.7936 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0084    1.1207   -0.7425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1402    1.7384    0.0685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3031    3.0379   -0.3185 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3405    0.8873   -0.2940 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1689   -0.5501   -0.0271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7013   -0.8850    1.3750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0546   -1.3268   -1.0033 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1320   -1.0881   -0.1096 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0026   -0.2178    2.0954 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0425    1.1653    1.4460 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6833   -0.4820    1.5761 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0234   -1.0916   -1.8123 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5893   -1.8633   -0.2768 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2765   -0.2462   -0.8490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9129    1.7270   -0.6616 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6987    0.8919   -1.7655 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0507    1.6279    1.1473 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1081    3.6431    0.4642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2655    1.2796    0.1836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4938    1.0446   -1.3942 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3760   -1.9239    1.5896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3961   -0.1493    2.1194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8145   -0.9274    1.3082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4706   -0.6367   -1.7941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4764   -2.0853   -1.5679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9312   -1.7683   -0.5113 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2455   -1.8975   -0.7404 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
  8 11  1  0
 11  2  1  0
  1 12  1  0
  1 13  1  0
  1 14  1  0
  3 15  1  0
  3 16  1  0
  3 17  1  0
  4 18  1  0
  4 19  1  0
  5 20  1  0
  6 21  1  0
  7 22  1  0
  7 23  1  0
  9 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
 10 29  1  0
 11 30  1  0
M  END
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3D SDF for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

  Mrv1572004191604392D          

 11 11  0  0  0  0            999 V2000
   -0.2822   -0.7752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.8125    0.1433    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2448    1.8695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1842    1.8695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145   -0.4125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4289    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0000    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7145    1.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.8250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.1434   -0.4125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  7  5  1  0  0  0  0
  7  6  1  0  0  0  0
  8  1  1  0  0  0  0
  8  2  1  0  0  0  0
  8  5  1  0  0  0  0
  9  3  1  0  0  0  0
  9  4  1  0  0  0  0
  9  6  1  0  0  0  0
 10  8  1  0  0  0  0
 10  9  1  0  0  0  0
 11  7  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0245344

> <DATABASE_NAME>
hmdb

> <SMILES>
CC1(C)CC(O)CC(C)(C)N1

> <INCHI_IDENTIFIER>
InChI=1S/C9H19NO/c1-8(2)5-7(11)6-9(3,4)10-8/h7,10-11H,5-6H2,1-4H3

> <INCHI_KEY>
VDVUCLWJZJHFAV-UHFFFAOYSA-N

> <FORMULA>
C9H19NO

> <MOLECULAR_WEIGHT>
157.257

> <EXACT_MASS>
157.146664236

> <JCHEM_ACCEPTOR_COUNT>
2

> <JCHEM_ATOM_COUNT>
30

> <JCHEM_AVERAGE_POLARIZABILITY>
18.829976779476127

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
2

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2,2,6,6-tetramethylpiperidin-4-ol

> <ALOGPS_LOGP>
1.12

> <JCHEM_LOGP>
0.5194845069999999

> <ALOGPS_LOGS>
-0.38

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
1

> <JCHEM_PHYSIOLOGICAL_CHARGE>
1

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.144970810743395

> <JCHEM_PKA_STRONGEST_BASIC>
10.087305118690338

> <JCHEM_POLAR_SURFACE_AREA>
32.26

> <JCHEM_REFRACTIVITY>
46.531699999999994

> <JCHEM_ROTATABLE_BOND_COUNT>
0

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.53e+01 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2,2,6,6-tetramethylpiperidin-4-ol

> <JCHEM_VEBER_RULE>
1

$$$$
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3D-SDF for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

HMDB0245344
     RDKit          3D
2,2,6,6-Tetramethyl-4-piperidinol
 30 30  0  0  0  0  0  0  0  0999 V2000
    1.7394    0.0891    1.3368 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2350   -0.2243   -0.0481 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4007   -0.8889   -0.7936 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0084    1.1207   -0.7425 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1402    1.7384    0.0685 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3031    3.0379   -0.3185 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3405    0.8873   -0.2940 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1689   -0.5501   -0.0271 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7013   -0.8850    1.3750 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0546   -1.3268   -1.0033 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1320   -1.0881   -0.1096 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0026   -0.2178    2.0954 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0425    1.1653    1.4460 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6833   -0.4820    1.5761 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0234   -1.0916   -1.8123 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.5893   -1.8633   -0.2768 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2765   -0.2462   -0.8490 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.9129    1.7270   -0.6616 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.6987    0.8919   -1.7655 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0507    1.6279    1.1473 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1081    3.6431    0.4642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2655    1.2796    0.1836 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4938    1.0446   -1.3942 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3760   -1.9239    1.5896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3961   -0.1493    2.1194 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8145   -0.9274    1.3082 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4706   -0.6367   -1.7941 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4764   -2.0853   -1.5679 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9312   -1.7683   -0.5113 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.2455   -1.8975   -0.7404 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  1  0
  5  6  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  8 10  1  0
  8 11  1  0
 11  2  1  0
  1 12  1  0
  1 13  1  0
  1 14  1  0
  3 15  1  0
  3 16  1  0
  3 17  1  0
  4 18  1  0
  4 19  1  0
  5 20  1  0
  6 21  1  0
  7 22  1  0
  7 23  1  0
  9 24  1  0
  9 25  1  0
  9 26  1  0
 10 27  1  0
 10 28  1  0
 10 29  1  0
 11 30  1  0
M  END
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PDB for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

HEADER    PROTEIN                                 19-APR-16   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   19-APR-16         0                                  
HETATM    1  C   UNK     0      -0.527  -1.447   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      -1.517   0.267   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0       2.324   3.490   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0       0.344   3.490   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0       1.334  -0.770   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0       2.667   1.540   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0       2.667   0.000   0.000  0.00  0.00           C+0
HETATM    8  C   UNK     0      -0.000   0.000   0.000  0.00  0.00           C+0
HETATM    9  C   UNK     0       1.334   2.310   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0       0.000   1.540   0.000  0.00  0.00           N+0
HETATM   11  O   UNK     0       4.001  -0.770   0.000  0.00  0.00           O+0
CONECT    1    8                                                            
CONECT    2    8                                                            
CONECT    3    9                                                            
CONECT    4    9                                                            
CONECT    5    7    8                                                       
CONECT    6    7    9                                                       
CONECT    7    5    6   11                                                  
CONECT    8    1    2    5   10                                             
CONECT    9    3    4    6   10                                             
CONECT   10    8    9                                                       
CONECT   11    7                                                            
MASTER        0    0    0    0    0    0    0    0   11    0   22    0
END
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3D PDB for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

COMPND    HMDB0245344
HETATM    1  C1  UNL     1       1.739   0.089   1.337  1.00  0.00           C  
HETATM    2  C2  UNL     1       1.235  -0.224  -0.048  1.00  0.00           C  
HETATM    3  C3  UNL     1       2.401  -0.889  -0.794  1.00  0.00           C  
HETATM    4  C4  UNL     1       1.008   1.121  -0.743  1.00  0.00           C  
HETATM    5  C5  UNL     1      -0.140   1.738   0.068  1.00  0.00           C  
HETATM    6  O1  UNL     1      -0.303   3.038  -0.319  1.00  0.00           O  
HETATM    7  C6  UNL     1      -1.340   0.887  -0.294  1.00  0.00           C  
HETATM    8  C7  UNL     1      -1.169  -0.550  -0.027  1.00  0.00           C  
HETATM    9  C8  UNL     1      -1.701  -0.885   1.375  1.00  0.00           C  
HETATM   10  C9  UNL     1      -2.055  -1.327  -1.003  1.00  0.00           C  
HETATM   11  N1  UNL     1       0.132  -1.088  -0.110  1.00  0.00           N  
HETATM   12  H1  UNL     1       1.003  -0.218   2.095  1.00  0.00           H  
HETATM   13  H2  UNL     1       2.042   1.165   1.446  1.00  0.00           H  
HETATM   14  H3  UNL     1       2.683  -0.482   1.576  1.00  0.00           H  
HETATM   15  H4  UNL     1       2.023  -1.092  -1.812  1.00  0.00           H  
HETATM   16  H5  UNL     1       2.589  -1.863  -0.277  1.00  0.00           H  
HETATM   17  H6  UNL     1       3.276  -0.246  -0.849  1.00  0.00           H  
HETATM   18  H7  UNL     1       1.913   1.727  -0.662  1.00  0.00           H  
HETATM   19  H8  UNL     1       0.699   0.892  -1.765  1.00  0.00           H  
HETATM   20  H9  UNL     1       0.051   1.628   1.147  1.00  0.00           H  
HETATM   21  H10 UNL     1      -0.108   3.643   0.464  1.00  0.00           H  
HETATM   22  H11 UNL     1      -2.266   1.280   0.184  1.00  0.00           H  
HETATM   23  H12 UNL     1      -1.494   1.045  -1.394  1.00  0.00           H  
HETATM   24  H13 UNL     1      -1.376  -1.924   1.590  1.00  0.00           H  
HETATM   25  H14 UNL     1      -1.396  -0.149   2.119  1.00  0.00           H  
HETATM   26  H15 UNL     1      -2.815  -0.927   1.308  1.00  0.00           H  
HETATM   27  H16 UNL     1      -2.471  -0.637  -1.794  1.00  0.00           H  
HETATM   28  H17 UNL     1      -1.476  -2.085  -1.568  1.00  0.00           H  
HETATM   29  H18 UNL     1      -2.931  -1.768  -0.511  1.00  0.00           H  
HETATM   30  H19 UNL     1       0.245  -1.897  -0.740  1.00  0.00           H  
CONECT    1    2   12   13   14
CONECT    2    3    4   11
CONECT    3   15   16   17
CONECT    4    5   18   19
CONECT    5    6    7   20
CONECT    6   21
CONECT    7    8   22   23
CONECT    8    9   10   11
CONECT    9   24   25   26
CONECT   10   27   28   29
CONECT   11   30
END
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SMILES for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

CC1(C)CC(O)CC(C)(C)N1
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INCHI for HMDB0245344 (2,2,6,6-Tetramethyl-4-piperidinol)

InChI=1S/C9H19NO/c1-8(2)5-7(11)6-9(3,4)10-8/h7,10-11H,5-6H2,1-4H3
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Synonyms
ValueSource
4-Hydroxy-2,2,6,6-tetramethylpiperidineMeSH
Lastar aMeSH
Lastar a, monosodium saltMeSH
Chemical FormulaC9H19NO
Average Molecular Weight157.257
Monoisotopic Molecular Weight157.146664236
IUPAC Name2,2,6,6-tetramethylpiperidin-4-ol
Traditional Name2,2,6,6-tetramethylpiperidin-4-ol
CAS Registry NumberNot Available
SMILES
CC1(C)CC(O)CC(C)(C)N1
InChI Identifier
InChI=1S/C9H19NO/c1-8(2)5-7(11)6-9(3,4)10-8/h7,10-11H,5-6H2,1-4H3
InChI KeyVDVUCLWJZJHFAV-UHFFFAOYSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as piperidines. Piperidines are compounds containing a piperidine ring, which is a saturated aliphatic six-member ring with one nitrogen atom and five carbon atoms.
KingdomOrganic compounds
Super ClassOrganoheterocyclic compounds
ClassPiperidines
Sub ClassNot Available
Direct ParentPiperidines
Alternative Parents
Substituents
  • Piperidine
  • Secondary alcohol
  • Azacycle
  • Secondary amine
  • Secondary aliphatic amine
  • Organic nitrogen compound
  • Organic oxygen compound
  • Organopnictogen compound
  • Hydrocarbon derivative
  • Organooxygen compound
  • Organonitrogen compound
  • Amine
  • Alcohol
  • Aliphatic heteromonocyclic compound
Molecular FrameworkAliphatic heteromonocyclic compounds
External DescriptorsNot Available
Ontology
Physiological effectNot Available
Disposition
Biological locationSource
ProcessNot Available
RoleNot Available
Physical Properties
StateNot Available
Experimental Molecular Properties
PropertyValueReference
Melting PointNot AvailableNot Available
Boiling PointNot AvailableNot Available
Water SolubilityNot AvailableNot Available
LogPNot AvailableNot Available
Experimental Chromatographic PropertiesNot Available
Predicted Molecular Properties
Predicted Chromatographic Properties
Spectra
Biological Properties
Cellular LocationsNot Available
Biospecimen Locations
  • Blood
Tissue LocationsNot Available
Pathways
Normal Concentrations
BiospecimenStatusValueAgeSexConditionReferenceDetails
BloodDetected but not QuantifiedNot QuantifiedNot SpecifiedNot SpecifiedNormal details
Abnormal Concentrations
Not Available
Associated Disorders and Diseases
Disease ReferencesNone
Associated OMIM IDsNone
DrugBank IDNot Available
Phenol Explorer Compound IDNot Available
FooDB IDNot Available
KNApSAcK IDNot Available
Chemspider ID68000
KEGG Compound IDNot Available
BioCyc IDNot Available
BiGG IDNot Available
Wikipedia LinkNot Available
METLIN IDNot Available
PubChem CompoundNot Available
PDB IDNot Available
ChEBI IDNot Available
Food Biomarker OntologyNot Available
VMH IDNot Available
MarkerDB IDNot Available
Good Scents IDNot Available
References
Synthesis ReferenceNot Available
Material Safety Data Sheet (MSDS)Not Available
General References
  1. Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]