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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-10 22:36:19 UTC

Update Date

2021-09-26 22:54:04 UTC

HMDB ID

HMDB0245542

Secondary Accession Numbers

None

Metabolite Identification

Common Name

2',3'-Didehydro-2',3'-dideoxyguanosine

Description

2',3'-Didehydro-2',3'-dideoxyguanosine belongs to the class of organic compounds known as hypoxanthines. Hypoxanthines are compounds containing the purine derivative 1H-purin-6(9H)-one. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring. Based on a literature review a small amount of articles have been published on 2',3'-Didehydro-2',3'-dideoxyguanosine. This compound has been identified in human blood as reported by (PMID: 31557052 ). 2',3'-didehydro-2',3'-dideoxyguanosine is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 2',3'-Didehydro-2',3'-dideoxyguanosine is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

HMDB0245542
     RDKit          3D
2',3'-Didehydro-2',3'-dideoxyguanosine
 29 31  0  0  0  0  0  0  0  0999 V2000
   -3.5882    2.3585    1.2379 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1802    1.1673    0.5965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8812    0.7668    0.6707 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4518   -0.3605    0.0745 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3764   -1.1086   -0.6229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7089   -2.1549   -1.1091 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4370   -2.0590   -0.7320 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2408   -0.9473    0.0105 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0161   -0.4829    0.6138 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9649   -1.6077    0.5412 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9977   -1.2233   -0.1639 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7701    0.1726   -0.5847 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9018    1.0016    0.0202 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7197    2.3513   -0.2769 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5541    0.5598   -0.0907 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6905   -0.7323   -0.7159 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4813   -1.4556   -1.3644 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0617    0.4052   -0.0988 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8813    3.0249    1.5939 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5907    2.5812    1.3606 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3230   -2.7809   -0.9928 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8256   -0.1963    1.6752 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7607   -2.5708    1.0258 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8597   -1.8545   -0.3819 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7945    0.3018   -1.6875 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9651    0.7933    1.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548    0.6106   -0.4373 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3331    2.7601    0.5603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0707    0.6794   -0.1795 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 12 15  1  0
  5 16  1  0
 16 17  2  0
 16 18  1  0
 18  2  1  0
  8  4  1  0
 15  9  1  0
  1 19  1  0
  1 20  1  0
  7 21  1  0
  9 22  1  0
 10 23  1  0
 11 24  1  0
 12 25  1  0
 13 26  1  0
 13 27  1  0
 14 28  1  0
 18 29  1  0
M  END

  Mrv1652309112100362D          

 18 20  0  0  0  0            999 V2000
   -0.3984    2.0890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0865    1.4216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3984    0.7541    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1831    1.0091    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1831    1.8341    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8505    2.3190    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7643    3.1395    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1435   -0.0305    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6284   -0.6979    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1435   -1.3654    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6411   -1.1104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6411   -0.2854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3556    0.1271    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.0701   -0.2854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0701   -1.1104    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3556   -1.5229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3556   -2.3479    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7845    0.1271    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0  0  0  0
  2  3  1  0  0  0  0
  3  4  1  0  0  0  0
  4  5  1  0  0  0  0
  1  5  1  0  0  0  0
  5  6  1  0  0  0  0
  6  7  1  0  0  0  0
  3  8  1  0  0  0  0
  8  9  1  0  0  0  0
  9 10  2  0  0  0  0
 10 11  1  0  0  0  0
 11 12  2  0  0  0  0
  8 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  2  0  0  0  0
 14 15  1  0  0  0  0
 15 16  1  0  0  0  0
 11 16  1  0  0  0  0
 16 17  2  0  0  0  0
 14 18  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0245542

> <DATABASE_NAME>
hmdb

> <SMILES>
NC1=NC2=C(N=CN2C2OC(CO)C=C2)C(=O)N1

> <INCHI_IDENTIFIER>
InChI=1S/C10H11N5O3/c11-10-13-8-7(9(17)14-10)12-4-15(8)6-2-1-5(3-16)18-6/h1-2,4-6,16H,3H2,(H3,11,13,14,17)

> <INCHI_KEY>
FZYYPNOHKXTKLI-UHFFFAOYSA-N

> <FORMULA>
C10H11N5O3

> <MOLECULAR_WEIGHT>
249.23

> <EXACT_MASS>
249.086189234

> <JCHEM_ACCEPTOR_COUNT>
6

> <JCHEM_ATOM_COUNT>
29

> <JCHEM_AVERAGE_POLARIZABILITY>
23.70420873698251

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
3

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
2-amino-9-[5-(hydroxymethyl)-2,5-dihydrofuran-2-yl]-6,9-dihydro-1H-purin-6-one

> <ALOGPS_LOGP>
-1.10

> <JCHEM_LOGP>
-0.9183326386666666

> <ALOGPS_LOGS>
-1.56

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
3

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
14.630324189898033

> <JCHEM_PKA_STRONGEST_ACIDIC>
10.157180549361186

> <JCHEM_PKA_STRONGEST_BASIC>
0.4355968111038282

> <JCHEM_POLAR_SURFACE_AREA>
114.76

> <JCHEM_REFRACTIVITY>
63.01469999999999

> <JCHEM_ROTATABLE_BOND_COUNT>
2

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
6.92e+00 g/l

> <JCHEM_TRADITIONAL_IUPAC>
2-amino-9-[5-(hydroxymethyl)-2,5-dihydrofuran-2-yl]-1H-purin-6-one

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0245542
     RDKit          3D
2',3'-Didehydro-2',3'-dideoxyguanosine
 29 31  0  0  0  0  0  0  0  0999 V2000
   -3.5882    2.3585    1.2379 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1802    1.1673    0.5965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8812    0.7668    0.6707 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4518   -0.3605    0.0745 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3764   -1.1086   -0.6229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7089   -2.1549   -1.1091 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4370   -2.0590   -0.7320 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2408   -0.9473    0.0105 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0161   -0.4829    0.6138 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9649   -1.6077    0.5412 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9977   -1.2233   -0.1639 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7701    0.1726   -0.5847 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9018    1.0016    0.0202 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7197    2.3513   -0.2769 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5541    0.5598   -0.0907 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6905   -0.7323   -0.7159 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4813   -1.4556   -1.3644 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0617    0.4052   -0.0988 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8813    3.0249    1.5939 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5907    2.5812    1.3606 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3230   -2.7809   -0.9928 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8256   -0.1963    1.6752 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7607   -2.5708    1.0258 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8597   -1.8545   -0.3819 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7945    0.3018   -1.6875 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9651    0.7933    1.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548    0.6106   -0.4373 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3331    2.7601    0.5603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0707    0.6794   -0.1795 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 12 15  1  0
  5 16  1  0
 16 17  2  0
 16 18  1  0
 18  2  1  0
  8  4  1  0
 15  9  1  0
  1 19  1  0
  1 20  1  0
  7 21  1  0
  9 22  1  0
 10 23  1  0
 11 24  1  0
 12 25  1  0
 13 26  1  0
 13 27  1  0
 14 28  1  0
 18 29  1  0
M  END

HEADER    PROTEIN                                 11-SEP-21   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   11-SEP-21         0                                  
HETATM    1  C   UNK     0      -0.744   3.899   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       0.161   2.654   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      -0.744   1.408   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      -2.208   1.884   0.000  0.00  0.00           O+0
HETATM    5  C   UNK     0      -2.208   3.424   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      -3.454   4.329   0.000  0.00  0.00           C+0
HETATM    7  O   UNK     0      -3.293   5.860   0.000  0.00  0.00           O+0
HETATM    8  N   UNK     0      -0.268  -0.057   0.000  0.00  0.00           N+0
HETATM    9  C   UNK     0      -1.173  -1.303   0.000  0.00  0.00           C+0
HETATM   10  N   UNK     0      -0.268  -2.549   0.000  0.00  0.00           N+0
HETATM   11  C   UNK     0       1.197  -2.073   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       1.197  -0.533   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0       2.530   0.237   0.000  0.00  0.00           N+0
HETATM   14  C   UNK     0       3.864  -0.533   0.000  0.00  0.00           C+0
HETATM   15  N   UNK     0       3.864  -2.073   0.000  0.00  0.00           N+0
HETATM   16  C   UNK     0       2.530  -2.843   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       2.530  -4.383   0.000  0.00  0.00           O+0
HETATM   18  N   UNK     0       5.198   0.237   0.000  0.00  0.00           N+0
CONECT    1    2    5                                                       
CONECT    2    1    3                                                       
CONECT    3    2    4    8                                                  
CONECT    4    3    5                                                       
CONECT    5    4    1    6                                                  
CONECT    6    5    7                                                       
CONECT    7    6                                                            
CONECT    8    3    9   12                                                  
CONECT    9    8   10                                                       
CONECT   10    9   11                                                       
CONECT   11   10   12   16                                                  
CONECT   12   11    8   13                                                  
CONECT   13   12   14                                                       
CONECT   14   13   15   18                                                  
CONECT   15   14   16                                                       
CONECT   16   15   11   17                                                  
CONECT   17   16                                                            
CONECT   18   14                                                            
MASTER        0    0    0    0    0    0    0    0   18    0   40    0
END

COMPND    HMDB0245542
HETATM    1  N1  UNL     1      -3.588   2.358   1.238  1.00  0.00           N  
HETATM    2  C1  UNL     1      -3.180   1.167   0.596  1.00  0.00           C  
HETATM    3  N2  UNL     1      -1.881   0.767   0.671  1.00  0.00           N  
HETATM    4  C2  UNL     1      -1.452  -0.361   0.075  1.00  0.00           C  
HETATM    5  C3  UNL     1      -2.376  -1.109  -0.623  1.00  0.00           C  
HETATM    6  N3  UNL     1      -1.709  -2.155  -1.109  1.00  0.00           N  
HETATM    7  C4  UNL     1      -0.437  -2.059  -0.732  1.00  0.00           C  
HETATM    8  N4  UNL     1      -0.241  -0.947   0.011  1.00  0.00           N  
HETATM    9  C5  UNL     1       1.016  -0.483   0.614  1.00  0.00           C  
HETATM   10  C6  UNL     1       1.965  -1.608   0.541  1.00  0.00           C  
HETATM   11  C7  UNL     1       2.998  -1.223  -0.164  1.00  0.00           C  
HETATM   12  C8  UNL     1       2.770   0.173  -0.585  1.00  0.00           C  
HETATM   13  C9  UNL     1       3.902   1.002   0.020  1.00  0.00           C  
HETATM   14  O1  UNL     1       3.720   2.351  -0.277  1.00  0.00           O  
HETATM   15  O2  UNL     1       1.554   0.560  -0.091  1.00  0.00           O  
HETATM   16  C10 UNL     1      -3.691  -0.732  -0.716  1.00  0.00           C  
HETATM   17  O3  UNL     1      -4.481  -1.456  -1.364  1.00  0.00           O  
HETATM   18  N5  UNL     1      -4.062   0.405  -0.099  1.00  0.00           N  
HETATM   19  H1  UNL     1      -2.881   3.025   1.594  1.00  0.00           H  
HETATM   20  H2  UNL     1      -4.591   2.581   1.361  1.00  0.00           H  
HETATM   21  H3  UNL     1       0.323  -2.781  -0.993  1.00  0.00           H  
HETATM   22  H4  UNL     1       0.826  -0.196   1.675  1.00  0.00           H  
HETATM   23  H5  UNL     1       1.761  -2.571   1.026  1.00  0.00           H  
HETATM   24  H6  UNL     1       3.860  -1.855  -0.382  1.00  0.00           H  
HETATM   25  H7  UNL     1       2.794   0.302  -1.687  1.00  0.00           H  
HETATM   26  H8  UNL     1       3.965   0.793   1.088  1.00  0.00           H  
HETATM   27  H9  UNL     1       4.855   0.611  -0.437  1.00  0.00           H  
HETATM   28  H10 UNL     1       3.333   2.760   0.560  1.00  0.00           H  
HETATM   29  H11 UNL     1      -5.071   0.679  -0.179  1.00  0.00           H  
CONECT    1    2   19   20
CONECT    2    3    3   18
CONECT    3    4
CONECT    4    5    5    8
CONECT    5    6   16
CONECT    6    7    7
CONECT    7    8   21
CONECT    8    9
CONECT    9   10   15   22
CONECT   10   11   11   23
CONECT   11   12   24
CONECT   12   13   15   25
CONECT   13   14   26   27
CONECT   14   28
CONECT   16   17   17   18
CONECT   18   29
END

HMDB0245542
     RDKit          3D
2',3'-Didehydro-2',3'-dideoxyguanosine
 29 31  0  0  0  0  0  0  0  0999 V2000
   -3.5882    2.3585    1.2379 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1802    1.1673    0.5965 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8812    0.7668    0.6707 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4518   -0.3605    0.0745 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3764   -1.1086   -0.6229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7089   -2.1549   -1.1091 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4370   -2.0590   -0.7320 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2408   -0.9473    0.0105 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.0161   -0.4829    0.6138 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9649   -1.6077    0.5412 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9977   -1.2233   -0.1639 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7701    0.1726   -0.5847 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9018    1.0016    0.0202 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7197    2.3513   -0.2769 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5541    0.5598   -0.0907 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6905   -0.7323   -0.7159 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4813   -1.4556   -1.3644 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0617    0.4052   -0.0988 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.8813    3.0249    1.5939 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5907    2.5812    1.3606 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3230   -2.7809   -0.9928 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8256   -0.1963    1.6752 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7607   -2.5708    1.0258 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8597   -1.8545   -0.3819 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7945    0.3018   -1.6875 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9651    0.7933    1.0884 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.8548    0.6106   -0.4373 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3331    2.7601    0.5603 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0707    0.6794   -0.1795 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 12 15  1  0
  5 16  1  0
 16 17  2  0
 16 18  1  0
 18  2  1  0
  8  4  1  0
 15  9  1  0
  1 19  1  0
  1 20  1  0
  7 21  1  0
  9 22  1  0
 10 23  1  0
 11 24  1  0
 12 25  1  0
 13 26  1  0
 13 27  1  0
 14 28  1  0
 18 29  1  0
M  END

View in JSmol View NMR Assignments View Stereo Labels

Synonyms

Not Available

Chemical Formula

C₁₀H₁₁N₅O₃

Average Molecular Weight

249.23

Monoisotopic Molecular Weight

249.086189234

IUPAC Name

2-amino-9-[5-(hydroxymethyl)-2,5-dihydrofuran-2-yl]-6,9-dihydro-1H-purin-6-one

Traditional Name

2-amino-9-[5-(hydroxymethyl)-2,5-dihydrofuran-2-yl]-1H-purin-6-one

CAS Registry Number

Not Available

SMILES

NC1=NC2=C(N=CN2C2OC(CO)C=C2)C(=O)N1

InChI Identifier

InChI=1S/C10H11N5O3/c11-10-13-8-7(9(17)14-10)12-4-15(8)6-2-1-5(3-16)18-6/h1-2,4-6,16H,3H2,(H3,11,13,14,17)

InChI Key

FZYYPNOHKXTKLI-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as hypoxanthines. Hypoxanthines are compounds containing the purine derivative 1H-purin-6(9H)-one. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring.

Kingdom

Organic compounds

Super Class

Organoheterocyclic compounds

Class

Imidazopyrimidines

Sub Class

Purines and purine derivatives

Direct Parent

Hypoxanthines

Alternative Parents

Substituents

6-oxopurine
Hypoxanthine
Aminopyrimidine
Pyrimidone
N-substituted imidazole
Pyrimidine
Azole
Dihydrofuran
Heteroaromatic compound
Imidazole
Vinylogous amide
Oxacycle
Azacycle
Organooxygen compound
Organonitrogen compound
Alcohol
Organic nitrogen compound
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organic oxygen compound
Amine
Primary alcohol
Primary amine
Aromatic heteropolycyclic compound

Molecular Framework

Aromatic heteropolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31557052)

Source

Exogenous

Exogenous (PMID: 31557052)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	-1.1	ALOGPS
logP	-0.92	ChemAxon
logS	-1.6	ALOGPS
pKa (Strongest Acidic)	10.16	ChemAxon
pKa (Strongest Basic)	0.44	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	6	ChemAxon
Hydrogen Donor Count	3	ChemAxon
Polar Surface Area	114.76 Å²	ChemAxon
Rotatable Bond Count	2	ChemAxon
Refractivity	63.01 m³·mol⁻¹	ChemAxon
Polarizability	23.7 Å³	ChemAxon
Number of Rings	3	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	155.232	30932474
DeepCCS	[M-H]-	152.874	30932474
DeepCCS	[M-2H]-	186.293	30932474
DeepCCS	[M+Na]+	161.384	30932474
AllCCS	[M+H]+	156.2	32859911
AllCCS	[M+H-H2O]+	152.4	32859911
AllCCS	[M+NH4]+	159.8	32859911
AllCCS	[M+Na]+	160.8	32859911
AllCCS	[M-H]-	155.7	32859911
AllCCS	[M+Na-2H]-	155.3	32859911
AllCCS	[M+HCOO]-	155.0	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
2',3'-Didehydro-2',3'-dideoxyguanosine	NC1=NC2=C(N=CN2C2OC(CO)C=C2)C(=O)N1	3431.0	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine	NC1=NC2=C(N=CN2C2OC(CO)C=C2)C(=O)N1	2386.1	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine	NC1=NC2=C(N=CN2C2OC(CO)C=C2)C(=O)N1	2737.0	Semi standard non polar	33892256

Derivatized

Derivative Name / Structure	SMILES	Kovats RI Value	Column Type	Reference
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #1	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C)O2)C(=O)[NH]1	2492.5	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #1	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C)O2)C(=O)[NH]1	2722.9	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #1	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C)O2)C(=O)[NH]1	3773.1	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #2	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N)N([Si](C)(C)C)C3=O)O1	2547.4	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #2	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N)N([Si](C)(C)C)C3=O)O1	2658.3	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #2	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N)N([Si](C)(C)C)C3=O)O1	3840.2	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #3	C[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)[NH]1)[Si](C)(C)C	2484.8	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #3	C[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)[NH]1)[Si](C)(C)C	2865.8	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #3	C[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)[NH]1)[Si](C)(C)C	4031.8	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #4	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C	2568.4	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #4	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C	2865.9	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TMS,isomer #4	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C	4003.0	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #1	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C)[Si](C)(C)C)[NH]C3=O)O1	2509.2	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #1	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C)[Si](C)(C)C)[NH]C3=O)O1	2799.3	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #1	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C)[Si](C)(C)C)[NH]C3=O)O1	3458.9	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #2	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C)O2)C(=O)N1[Si](C)(C)C	2569.1	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #2	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C)O2)C(=O)N1[Si](C)(C)C	2755.7	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #2	C[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C)O2)C(=O)N1[Si](C)(C)C	3472.3	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #3	C[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C)[Si](C)(C)C	2603.9	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #3	C[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C)[Si](C)(C)C	2960.8	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TMS,isomer #3	C[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C)[Si](C)(C)C	3680.5	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,4TMS,isomer #1	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)C3=O)O1	2622.6	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,4TMS,isomer #1	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)C3=O)O1	2895.7	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,4TMS,isomer #1	C[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C)[Si](C)(C)C)N([Si](C)(C)C)C3=O)O1	3204.6	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C(C)(C)C)O2)C(=O)[NH]1	2908.8	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C(C)(C)C)O2)C(=O)[NH]1	3160.8	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #1	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C(C)(C)C)O2)C(=O)[NH]1	3800.7	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N)N([Si](C)(C)C(C)(C)C)C3=O)O1	2969.4	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N)N([Si](C)(C)C(C)(C)C)C3=O)O1	3122.7	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #2	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N)N([Si](C)(C)C(C)(C)C)C3=O)O1	3844.2	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)[NH]1)[Si](C)(C)C(C)(C)C	2903.4	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)[NH]1)[Si](C)(C)C(C)(C)C	3316.6	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)[NH]1)[Si](C)(C)C(C)(C)C	3948.5	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C(C)(C)C	2984.3	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C(C)(C)C	3298.9	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,2TBDMS,isomer #4	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C(C)(C)C	3921.9	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[NH]C3=O)O1	3069.3	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[NH]C3=O)O1	3468.8	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)[NH]C3=O)O1	3563.7	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C(C)(C)C)O2)C(=O)N1[Si](C)(C)C(C)(C)C	3188.5	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C(C)(C)C)O2)C(=O)N1[Si](C)(C)C(C)(C)C	3452.0	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #2	CC(C)(C)[Si](C)(C)NC1=NC2=C(N=CN2C2C=CC(CO[Si](C)(C)C(C)(C)C)O2)C(=O)N1[Si](C)(C)C(C)(C)C	3572.6	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3166.5	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3631.9	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,3TBDMS,isomer #3	CC(C)(C)[Si](C)(C)N(C1=NC2=C(N=CN2C2C=CC(CO)O2)C(=O)N1[Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C	3696.6	Standard polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C3=O)O1	3359.9	Semi standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C3=O)O1	3754.2	Standard non polar	33892256
2',3'-Didehydro-2',3'-dideoxyguanosine,4TBDMS,isomer #1	CC(C)(C)[Si](C)(C)OCC1C=CC(N2C=NC3=C2N=C(N([Si](C)(C)C(C)(C)C)[Si](C)(C)C(C)(C)C)N([Si](C)(C)C(C)(C)C)C3=O)O1	3434.7	Standard polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (Non-derivatized) - 70eV, Positive	splash10-00p0-9440000000-dae829fcad5bb14f47aa	2021-09-23	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (TBDMS_1_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (TBDMS_1_2) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine GC-MS (TBDMS_1_3) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine 10V, Positive-QTOF	splash10-0udi-0900000000-361a2474138028086bb3	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine 20V, Positive-QTOF	splash10-0udi-0900000000-361a2474138028086bb3	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine 40V, Positive-QTOF	splash10-01p9-0900000000-1e47fac0704957bd73f4	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine 10V, Negative-QTOF	splash10-0002-0390000000-4eb5576e942d5916e35d	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine 20V, Negative-QTOF	splash10-0udi-0920000000-e00dc8f440ad5e3e6234	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 2',3'-Didehydro-2',3'-dideoxyguanosine 40V, Negative-QTOF	splash10-001i-1900000000-2ef0fbd673e0551c78e0	2021-10-12	Wishart Lab	View Spectrum

NMR Spectra

Spectrum Type	Description	Deposition Date	Source	View
Predicted 1D NMR	¹³C NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 100 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 1000 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 200 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 300 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 400 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 500 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 600 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 700 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 800 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹³C NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum
Predicted 1D NMR	¹H NMR Spectrum (1D, 900 MHz, D₂O, predicted)	2021-10-12	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	31557052	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

320267

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

360780

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Showing metabocard for 2',3'-Didehydro-2',3'-dideoxyguanosine (HMDB0245542)

MOL for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

3D MOL for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

3D SDF for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

3D-SDF for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

PDB for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

3D PDB for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

SMILES for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

INCHI for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

Structure for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

3D Structure for HMDB0245542 (2',3'-Didehydro-2',3'-dideoxyguanosine)

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

Derivatized

GC-MS Spectra

MS/MS Spectra

NMR Spectra