Record Information |
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Version | 5.0 |
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Status | Detected but not Quantified |
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Creation Date | 2021-09-10 23:44:44 UTC |
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Update Date | 2021-09-26 22:56:00 UTC |
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HMDB ID | HMDB0246729 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde |
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Description | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde, also known as 2-FHMPN or 2-formyl-5-(hydroxymethyl)pyrrole-1-norleucine, belongs to the class of organic compounds known as aryl-aldehydes. Aryl-aldehydes are compounds containing an aldehyde group directly attached to an aromatic ring. Based on a literature review a significant number of articles have been published on 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde. This compound has been identified in human blood as reported by (PMID: 31557052 ). 5-(hydroxymethyl)-1h-pyrrole-2-carbaldehyde is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources. |
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Structure | InChI=1S/C6H7NO2/c8-3-5-1-2-6(4-9)7-5/h1-3,7,9H,4H2 |
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Synonyms | Value | Source |
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2-Amino-6-(2-formyl-5-hydroxymethyl-1-pyrrolyl)-hexanoic acid | ChEBI | 2-Amino-6-(2-formyl-5-hydroxymethylpyrrol-1-yl)hexanoic acid | ChEBI | 2-FHMPN | ChEBI | 2-Formyl-5-(hydroxymethyl)pyrrole-1-norleucine | ChEBI | 5-(Hydroxymethyl)pyrrole-2-carboxaldehyde | ChEBI | 2-Amino-6-(2-formyl-5-hydroxymethyl-1-pyrrolyl)-hexanoate | Generator | 2-Amino-6-(2-formyl-5-hydroxymethylpyrrol-1-yl)hexanoate | Generator |
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Chemical Formula | C6H7NO2 |
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Average Molecular Weight | 125.127 |
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Monoisotopic Molecular Weight | 125.047678469 |
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IUPAC Name | 5-(hydroxymethyl)-1H-pyrrole-2-carbaldehyde |
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Traditional Name | pyrraline |
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CAS Registry Number | Not Available |
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SMILES | OCC1=CC=C(N1)C=O |
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InChI Identifier | InChI=1S/C6H7NO2/c8-3-5-1-2-6(4-9)7-5/h1-3,7,9H,4H2 |
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InChI Key | SRPREECLSOIPNK-UHFFFAOYSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as aryl-aldehydes. Aryl-aldehydes are compounds containing an aldehyde group directly attached to an aromatic ring. |
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Kingdom | Organic compounds |
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Super Class | Organic oxygen compounds |
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Class | Organooxygen compounds |
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Sub Class | Carbonyl compounds |
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Direct Parent | Aryl-aldehydes |
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Alternative Parents | |
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Substituents | - Aryl-aldehyde
- Substituted pyrrole
- Heteroaromatic compound
- Pyrrole
- Azacycle
- Organoheterocyclic compound
- Organic nitrogen compound
- Organopnictogen compound
- Organic oxide
- Hydrocarbon derivative
- Aromatic alcohol
- Primary alcohol
- Organonitrogen compound
- Alcohol
- Aromatic heteromonocyclic compound
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Molecular Framework | Aromatic heteromonocyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde,2TMS,isomer #1 | C[Si](C)(C)OCC1=CC=C(C=O)N1[Si](C)(C)C | 1624.6 | Semi standard non polar | 33892256 | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde,2TMS,isomer #1 | C[Si](C)(C)OCC1=CC=C(C=O)N1[Si](C)(C)C | 1634.4 | Standard non polar | 33892256 | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde,2TMS,isomer #1 | C[Si](C)(C)OCC1=CC=C(C=O)N1[Si](C)(C)C | 1623.6 | Standard polar | 33892256 | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CC=C(C=O)N1[Si](C)(C)C(C)(C)C | 2043.8 | Semi standard non polar | 33892256 | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CC=C(C=O)N1[Si](C)(C)C(C)(C)C | 2067.2 | Standard non polar | 33892256 | 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)OCC1=CC=C(C=O)N1[Si](C)(C)C(C)(C)C | 1885.7 | Standard polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted GC-MS | Predicted GC-MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde GC-MS (Non-derivatized) - 70eV, Positive | splash10-056s-9700000000-8d0e7d16cc2ce3843422 | 2021-09-23 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde GC-MS (TMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde GC-MS (TMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde GC-MS (TBDMS_1_1) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde GC-MS (TBDMS_1_2) - 70eV, Positive | Not Available | 2021-11-03 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde 10V, Positive-QTOF | splash10-004i-4900000000-831ca9b4f8b9224589fe | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde 20V, Positive-QTOF | splash10-001i-9100000000-c82d2e208096f15247ad | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde 40V, Positive-QTOF | splash10-001u-9000000000-d7340904a5a30aa90e0d | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde 10V, Negative-QTOF | splash10-006x-9500000000-9655972917f3f23c8041 | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde 20V, Negative-QTOF | splash10-014l-9100000000-d4542f03eb94331921fa | 2021-10-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - 5-(Hydroxymethyl)-1H-pyrrole-2-carbaldehyde 40V, Negative-QTOF | splash10-014i-9000000000-1c0b2df48f60da5cce21 | 2021-10-12 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-10-13 | Wishart Lab | View Spectrum |
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