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Record Information

Version

5.0

Status

Detected but not Quantified

Creation Date

2021-09-11 00:02:01 UTC

Update Date

2021-09-26 22:56:27 UTC

HMDB ID

HMDB0247015

Secondary Accession Numbers

None

Metabolite Identification

Common Name

5alpha-Cyprinol

Description

5alpha-Cyprinol, also known as 5α-cyprinol, belongs to the class of organic compounds known as tetrahydroxy bile acids, alcohols and derivatives. These are prenol lipids structurally characterized by a bile acid or alcohol which bears four hydroxyl groups. Based on a literature review a significant number of articles have been published on 5alpha-Cyprinol. This compound has been identified in human blood as reported by (PMID: 31557052 ). 5alpha-cyprinol is not a naturally occurring metabolite and is only found in those individuals exposed to this compound or its derivatives. Technically 5alpha-Cyprinol is part of the human exposome. The exposome can be defined as the collection of all the exposures of an individual in a lifetime and how those exposures relate to health. An individual's exposure begins before birth and includes insults from environmental and occupational sources.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI


  Mrv1533004241514042D          

 32 35  0  0  0  0            999 V2000
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 11 31  1  0  0  0  0
 14 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END

HMDB0247015
     RDKit          3D
5alpha-Cyprinol
 80 83  0  0  0  0  0  0  0  0999 V2000
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M  END


  Mrv1533004241514042D          

 32 35  0  0  0  0            999 V2000
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 24 25  1  0  0  0  0
 19 25  1  0  0  0  0
 25 26  1  0  0  0  0
 25 27  1  0  0  0  0
 15 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  1  0  0  0  0
 29 30  1  0  0  0  0
 29 31  1  0  0  0  0
 11 31  1  0  0  0  0
 14 31  1  0  0  0  0
 31 32  1  0  0  0  0
M  END
> <DATABASE_ID>
HMDB0247015

> <DATABASE_NAME>
hmdb

> <SMILES>
CC(CCCC(CO)CO)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C

> <INCHI_IDENTIFIER>
InChI=1S/C27H48O5/c1-16(5-4-6-17(14-28)15-29)20-7-8-21-25-22(13-24(32)27(20,21)3)26(2)10-9-19(30)11-18(26)12-23(25)31/h16-25,28-32H,4-15H2,1-3H3

> <INCHI_KEY>
JNMALBXXJSWZQY-UHFFFAOYSA-N

> <FORMULA>
C27H48O5

> <MOLECULAR_WEIGHT>
452.676

> <EXACT_MASS>
452.350174646

> <JCHEM_ACCEPTOR_COUNT>
5

> <JCHEM_ATOM_COUNT>
80

> <JCHEM_AVERAGE_POLARIZABILITY>
53.931617772634674

> <JCHEM_BIOAVAILABILITY>
1

> <JCHEM_DONOR_COUNT>
5

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
14-[7-hydroxy-6-(hydroxymethyl)heptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,9,16-triol

> <ALOGPS_LOGP>
2.58

> <JCHEM_LOGP>
2.2250458716666675

> <ALOGPS_LOGS>
-3.96

> <JCHEM_MDDR_LIKE_RULE>
1

> <JCHEM_NUMBER_OF_RINGS>
4

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA>
15.797323421675404

> <JCHEM_PKA_STRONGEST_ACIDIC>
15.098369946232207

> <JCHEM_PKA_STRONGEST_BASIC>
-0.15943471484097105

> <JCHEM_POLAR_SURFACE_AREA>
101.15

> <JCHEM_REFRACTIVITY>
126.55609999999997

> <JCHEM_ROTATABLE_BOND_COUNT>
7

> <JCHEM_RULE_OF_FIVE>
1

> <ALOGPS_SOLUBILITY>
4.95e-02 g/l

> <JCHEM_TRADITIONAL_IUPAC>
14-[7-hydroxy-6-(hydroxymethyl)heptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,9,16-triol

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0247015
     RDKit          3D
5alpha-Cyprinol
 80 83  0  0  0  0  0  0  0  0999 V2000
    2.2778   -1.9561    1.1139 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5703   -0.4499    0.8709 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8913   -0.4713    0.1730 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5766    0.8168   -0.1135 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8709    0.6080   -0.8394 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8496   -0.2183   -0.1021 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3134    0.2786    1.2174 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3585    0.4405    2.1849 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0548   -0.4427   -1.0368 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0214   -1.2184   -0.4026 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4601   -0.0010   -0.0256 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5185    1.4135   -0.4951 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0561    1.5419   -1.0321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6252    1.0966    0.2285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0973    1.0622    0.1733 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6725    1.7543   -1.0524 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2044    1.3040   -2.2436 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545    1.8545   -0.9945 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8013    1.0462    0.0996 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2742    1.0104   -0.1854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0668    0.1085    0.6667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6244    0.8281    1.7464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3774   -1.1153    1.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9250   -0.9665    1.4376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1962   -0.3271    0.2411 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5934   -1.1628   -0.9410 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7350   -0.2456    0.4973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -1.4379   -0.0871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5469   -1.3895   -0.0473 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0256   -1.5793   -1.3523 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0800   -0.2055    0.5858 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0369   -0.2935    2.0717 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1021   -2.4130    0.1437 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403   -2.1701    1.9386 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2992   -2.3638    1.4283 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7060    0.0718    1.8048 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6393   -1.0962    0.7478 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8176   -1.0769   -0.7998 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812    1.2753    0.9188 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9411    1.5499   -0.6062 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3281    1.6410   -0.9799 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7045    0.2568   -1.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4791   -1.2764    0.0748 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0944   -0.4048    1.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8707    1.2506    1.1010 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5140    1.2199    2.7714 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7159   -0.9965   -1.9380 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4464    0.5549   -1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5709   -1.6596   -1.0984 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5430   -0.6297   -0.9382 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1013    1.4992   -1.4632 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7452    2.1719    0.2383 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0320    0.7819   -1.8357 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1539    2.5591   -1.3399 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2389    1.8370    1.0009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4676    1.7613    0.9938 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2842    2.8190   -0.9669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2360    0.3654   -2.4474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5742    1.5439   -1.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5326    2.9088   -0.8642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6656    1.5617    1.0807 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6515    2.0635   -0.0255 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4213    0.8337   -1.2860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9655   -0.2332    0.0728 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2677    1.5048    1.3913 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5898   -2.0335    0.5325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8637   -1.3768    2.1450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4829   -1.9660    1.5589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7884   -0.3072    2.3131 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4342   -2.2573   -0.7359 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7163   -1.0631   -1.0253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2112   -0.8420   -1.9058 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6241   -0.3876    1.6175 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472   -1.6423   -1.1367 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4375   -2.3287    0.4802 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2231   -2.3070    0.5039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7280   -2.0521   -1.8576 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9473   -0.1102    2.6271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6601    0.5139    2.5065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4313   -1.2344    2.4611 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  6  9  1  0
  9 10  1  0
  2 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 29 31  1  0
 31 32  1  0
 31 11  1  0
 31 14  1  0
 27 15  1  0
 25 19  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  2 36  1  0
  3 37  1  0
  3 38  1  0
  4 39  1  0
  4 40  1  0
  5 41  1  0
  5 42  1  0
  6 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  9 47  1  0
  9 48  1  0
 10 49  1  0
 11 50  1  0
 12 51  1  0
 12 52  1  0
 13 53  1  0
 13 54  1  0
 14 55  1  0
 15 56  1  0
 16 57  1  0
 17 58  1  0
 18 59  1  0
 18 60  1  0
 19 61  1  0
 20 62  1  0
 20 63  1  0
 21 64  1  0
 22 65  1  0
 23 66  1  0
 23 67  1  0
 24 68  1  0
 24 69  1  0
 26 70  1  0
 26 71  1  0
 26 72  1  0
 27 73  1  0
 28 74  1  0
 28 75  1  0
 29 76  1  0
 30 77  1  0
 32 78  1  0
 32 79  1  0
 32 80  1  0
M  END

HEADER    PROTEIN                                 24-APR-15   NONE
TITLE     NULL                                                        
COMPND    NULL                                                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   24-APR-15         0                                  
HETATM    1  C   UNK     0      10.350  -1.497   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0       9.580  -2.831   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      10.350  -4.165   0.000  0.00  0.00           C+0
HETATM    4  C   UNK     0      11.890  -4.165   0.000  0.00  0.00           C+0
HETATM    5  C   UNK     0      12.660  -5.498   0.000  0.00  0.00           C+0
HETATM    6  C   UNK     0      14.200  -5.498   0.000  0.00  0.00           C+0
HETATM    7  C   UNK     0      14.970  -6.832   0.000  0.00  0.00           C+0
HETATM    8  O   UNK     0      16.510  -6.832   0.000  0.00  0.00           O+0
HETATM    9  C   UNK     0      14.970  -4.165   0.000  0.00  0.00           C+0
HETATM   10  O   UNK     0      16.510  -4.165   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0       8.040  -2.831   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0       7.134  -4.077   0.000  0.00  0.00           C+0
HETATM   13  C   UNK     0       5.670  -3.601   0.000  0.00  0.00           C+0
HETATM   14  C   UNK     0       5.670  -2.061   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0       4.525  -1.031   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0       3.061  -1.506   0.000  0.00  0.00           C+0
HETATM   17  O   UNK     0       2.741  -3.013   0.000  0.00  0.00           O+0
HETATM   18  C   UNK     0       1.916  -0.476   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0       2.237   1.030   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0       1.092   2.061   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0       1.412   3.567   0.000  0.00  0.00           C+0
HETATM   22  O   UNK     0       0.268   4.598   0.000  0.00  0.00           O+0
HETATM   23  C   UNK     0       2.877   4.043   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0       4.021   3.013   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0       3.701   1.506   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0       5.166   1.982   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0       4.846   0.476   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0       6.310   0.952   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0       7.455  -0.079   0.000  0.00  0.00           C+0
HETATM   30  O   UNK     0       8.919   0.397   0.000  0.00  0.00           O+0
HETATM   31  C   UNK     0       7.134  -1.585   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       8.641  -1.265   0.000  0.00  0.00           C+0
CONECT    1    2                                                            
CONECT    2    1    3   11                                                  
CONECT    3    2    4                                                       
CONECT    4    3    5                                                       
CONECT    5    4    6                                                       
CONECT    6    5    7    9                                                  
CONECT    7    6    8                                                       
CONECT    8    7                                                            
CONECT    9    6   10                                                       
CONECT   10    9                                                            
CONECT   11    2   12   31                                                  
CONECT   12   11   13                                                       
CONECT   13   12   14                                                       
CONECT   14   13   15   31                                                  
CONECT   15   14   16   27                                                  
CONECT   16   15   17   18                                                  
CONECT   17   16                                                            
CONECT   18   16   19                                                       
CONECT   19   18   20   25                                                  
CONECT   20   19   21                                                       
CONECT   21   20   22   23                                                  
CONECT   22   21                                                            
CONECT   23   21   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   19   26   27                                             
CONECT   26   25                                                            
CONECT   27   25   15   28                                                  
CONECT   28   27   29                                                       
CONECT   29   28   30   31                                                  
CONECT   30   29                                                            
CONECT   31   29   11   14   32                                             
CONECT   32   31                                                            
MASTER        0    0    0    0    0    0    0    0   32    0   70    0
END

COMPND    HMDB0247015
HETATM    1  C1  UNL     1       2.278  -1.956   1.114  1.00  0.00           C  
HETATM    2  C2  UNL     1       2.570  -0.450   0.871  1.00  0.00           C  
HETATM    3  C3  UNL     1       3.891  -0.471   0.173  1.00  0.00           C  
HETATM    4  C4  UNL     1       4.577   0.817  -0.113  1.00  0.00           C  
HETATM    5  C5  UNL     1       5.871   0.608  -0.839  1.00  0.00           C  
HETATM    6  C6  UNL     1       6.850  -0.218  -0.102  1.00  0.00           C  
HETATM    7  C7  UNL     1       7.313   0.279   1.217  1.00  0.00           C  
HETATM    8  O1  UNL     1       6.359   0.440   2.185  1.00  0.00           O  
HETATM    9  C8  UNL     1       8.055  -0.443  -1.037  1.00  0.00           C  
HETATM   10  O2  UNL     1       9.021  -1.218  -0.403  1.00  0.00           O  
HETATM   11  C9  UNL     1       1.460  -0.001  -0.026  1.00  0.00           C  
HETATM   12  C10 UNL     1       1.519   1.414  -0.495  1.00  0.00           C  
HETATM   13  C11 UNL     1       0.056   1.542  -1.032  1.00  0.00           C  
HETATM   14  C12 UNL     1      -0.625   1.097   0.229  1.00  0.00           C  
HETATM   15  C13 UNL     1      -2.097   1.062   0.173  1.00  0.00           C  
HETATM   16  C14 UNL     1      -2.673   1.754  -1.052  1.00  0.00           C  
HETATM   17  O3  UNL     1      -2.204   1.304  -2.244  1.00  0.00           O  
HETATM   18  C15 UNL     1      -4.154   1.854  -0.994  1.00  0.00           C  
HETATM   19  C16 UNL     1      -4.801   1.046   0.100  1.00  0.00           C  
HETATM   20  C17 UNL     1      -6.274   1.010  -0.185  1.00  0.00           C  
HETATM   21  C18 UNL     1      -7.067   0.108   0.667  1.00  0.00           C  
HETATM   22  O4  UNL     1      -7.624   0.828   1.746  1.00  0.00           O  
HETATM   23  C19 UNL     1      -6.377  -1.115   1.156  1.00  0.00           C  
HETATM   24  C20 UNL     1      -4.925  -0.966   1.438  1.00  0.00           C  
HETATM   25  C21 UNL     1      -4.196  -0.327   0.241  1.00  0.00           C  
HETATM   26  C22 UNL     1      -4.593  -1.163  -0.941  1.00  0.00           C  
HETATM   27  C23 UNL     1      -2.735  -0.246   0.497  1.00  0.00           C  
HETATM   28  C24 UNL     1      -2.039  -1.438  -0.087  1.00  0.00           C  
HETATM   29  C25 UNL     1      -0.547  -1.389  -0.047  1.00  0.00           C  
HETATM   30  O5  UNL     1      -0.026  -1.579  -1.352  1.00  0.00           O  
HETATM   31  C26 UNL     1       0.080  -0.206   0.586  1.00  0.00           C  
HETATM   32  C27 UNL     1       0.037  -0.294   2.072  1.00  0.00           C  
HETATM   33  H1  UNL     1       2.102  -2.413   0.144  1.00  0.00           H  
HETATM   34  H2  UNL     1       1.640  -2.170   1.939  1.00  0.00           H  
HETATM   35  H3  UNL     1       3.299  -2.364   1.428  1.00  0.00           H  
HETATM   36  H4  UNL     1       2.706   0.072   1.805  1.00  0.00           H  
HETATM   37  H5  UNL     1       4.639  -1.096   0.748  1.00  0.00           H  
HETATM   38  H6  UNL     1       3.818  -1.077  -0.800  1.00  0.00           H  
HETATM   39  H7  UNL     1       4.781   1.275   0.919  1.00  0.00           H  
HETATM   40  H8  UNL     1       3.941   1.550  -0.606  1.00  0.00           H  
HETATM   41  H9  UNL     1       6.328   1.641  -0.980  1.00  0.00           H  
HETATM   42  H10 UNL     1       5.704   0.257  -1.890  1.00  0.00           H  
HETATM   43  H11 UNL     1       6.479  -1.276   0.075  1.00  0.00           H  
HETATM   44  H12 UNL     1       8.094  -0.405   1.669  1.00  0.00           H  
HETATM   45  H13 UNL     1       7.871   1.251   1.101  1.00  0.00           H  
HETATM   46  H14 UNL     1       6.514   1.220   2.771  1.00  0.00           H  
HETATM   47  H15 UNL     1       7.716  -0.997  -1.938  1.00  0.00           H  
HETATM   48  H16 UNL     1       8.446   0.555  -1.320  1.00  0.00           H  
HETATM   49  H17 UNL     1       9.571  -1.660  -1.098  1.00  0.00           H  
HETATM   50  H18 UNL     1       1.543  -0.630  -0.938  1.00  0.00           H  
HETATM   51  H19 UNL     1       2.101   1.499  -1.463  1.00  0.00           H  
HETATM   52  H20 UNL     1       1.745   2.172   0.238  1.00  0.00           H  
HETATM   53  H21 UNL     1       0.032   0.782  -1.836  1.00  0.00           H  
HETATM   54  H22 UNL     1      -0.154   2.559  -1.340  1.00  0.00           H  
HETATM   55  H23 UNL     1      -0.239   1.837   1.001  1.00  0.00           H  
HETATM   56  H24 UNL     1      -2.468   1.761   0.994  1.00  0.00           H  
HETATM   57  H25 UNL     1      -2.284   2.819  -0.967  1.00  0.00           H  
HETATM   58  H26 UNL     1      -2.236   0.365  -2.447  1.00  0.00           H  
HETATM   59  H27 UNL     1      -4.574   1.544  -1.992  1.00  0.00           H  
HETATM   60  H28 UNL     1      -4.533   2.909  -0.864  1.00  0.00           H  
HETATM   61  H29 UNL     1      -4.666   1.562   1.081  1.00  0.00           H  
HETATM   62  H30 UNL     1      -6.652   2.063  -0.025  1.00  0.00           H  
HETATM   63  H31 UNL     1      -6.421   0.834  -1.286  1.00  0.00           H  
HETATM   64  H32 UNL     1      -7.966  -0.233   0.073  1.00  0.00           H  
HETATM   65  H33 UNL     1      -8.268   1.505   1.391  1.00  0.00           H  
HETATM   66  H34 UNL     1      -6.590  -2.033   0.533  1.00  0.00           H  
HETATM   67  H35 UNL     1      -6.864  -1.377   2.145  1.00  0.00           H  
HETATM   68  H36 UNL     1      -4.483  -1.966   1.559  1.00  0.00           H  
HETATM   69  H37 UNL     1      -4.788  -0.307   2.313  1.00  0.00           H  
HETATM   70  H38 UNL     1      -4.434  -2.257  -0.736  1.00  0.00           H  
HETATM   71  H39 UNL     1      -5.716  -1.063  -1.025  1.00  0.00           H  
HETATM   72  H40 UNL     1      -4.211  -0.842  -1.906  1.00  0.00           H  
HETATM   73  H41 UNL     1      -2.624  -0.388   1.617  1.00  0.00           H  
HETATM   74  H42 UNL     1      -2.347  -1.642  -1.137  1.00  0.00           H  
HETATM   75  H43 UNL     1      -2.437  -2.329   0.480  1.00  0.00           H  
HETATM   76  H44 UNL     1      -0.223  -2.307   0.504  1.00  0.00           H  
HETATM   77  H45 UNL     1      -0.728  -2.052  -1.858  1.00  0.00           H  
HETATM   78  H46 UNL     1       0.947  -0.110   2.627  1.00  0.00           H  
HETATM   79  H47 UNL     1      -0.660   0.514   2.507  1.00  0.00           H  
HETATM   80  H48 UNL     1      -0.431  -1.234   2.461  1.00  0.00           H  
CONECT    1    2   33   34   35
CONECT    2    3   11   36
CONECT    3    4   37   38
CONECT    4    5   39   40
CONECT    5    6   41   42
CONECT    6    7    9   43
CONECT    7    8   44   45
CONECT    8   46
CONECT    9   10   47   48
CONECT   10   49
CONECT   11   12   31   50
CONECT   12   13   51   52
CONECT   13   14   53   54
CONECT   14   15   31   55
CONECT   15   16   27   56
CONECT   16   17   18   57
CONECT   17   58
CONECT   18   19   59   60
CONECT   19   20   25   61
CONECT   20   21   62   63
CONECT   21   22   23   64
CONECT   22   65
CONECT   23   24   66   67
CONECT   24   25   68   69
CONECT   25   26   27
CONECT   26   70   71   72
CONECT   27   28   73
CONECT   28   29   74   75
CONECT   29   30   31   76
CONECT   30   77
CONECT   31   32
CONECT   32   78   79   80
END

HMDB0247015
     RDKit          3D
5alpha-Cyprinol
 80 83  0  0  0  0  0  0  0  0999 V2000
    2.2778   -1.9561    1.1139 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5703   -0.4499    0.8709 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8913   -0.4713    0.1730 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5766    0.8168   -0.1135 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8709    0.6080   -0.8394 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8496   -0.2183   -0.1021 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3134    0.2786    1.2174 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3585    0.4405    2.1849 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0548   -0.4427   -1.0368 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0214   -1.2184   -0.4026 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4601   -0.0010   -0.0256 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5185    1.4135   -0.4951 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0561    1.5419   -1.0321 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6252    1.0966    0.2285 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0973    1.0622    0.1733 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6725    1.7543   -1.0524 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2044    1.3040   -2.2436 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1545    1.8545   -0.9945 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8013    1.0462    0.0996 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2742    1.0104   -0.1854 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0668    0.1085    0.6667 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6244    0.8281    1.7464 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.3774   -1.1153    1.1561 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.9250   -0.9665    1.4376 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1962   -0.3271    0.2411 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5934   -1.1628   -0.9410 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7350   -0.2456    0.4973 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0386   -1.4379   -0.0871 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5469   -1.3895   -0.0473 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0256   -1.5793   -1.3523 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.0800   -0.2055    0.5858 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0369   -0.2935    2.0717 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1021   -2.4130    0.1437 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6403   -2.1701    1.9386 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.2992   -2.3638    1.4283 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7060    0.0718    1.8048 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6393   -1.0962    0.7478 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8176   -1.0769   -0.7998 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.7812    1.2753    0.9188 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9411    1.5499   -0.6062 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.3281    1.6410   -0.9799 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.7045    0.2568   -1.8895 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.4791   -1.2764    0.0748 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.0944   -0.4048    1.6691 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.8707    1.2506    1.1010 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.5140    1.2199    2.7714 H   0  0  0  0  0  0  0  0  0  0  0  0
    7.7159   -0.9965   -1.9380 H   0  0  0  0  0  0  0  0  0  0  0  0
    8.4464    0.5549   -1.3200 H   0  0  0  0  0  0  0  0  0  0  0  0
    9.5709   -1.6596   -1.0984 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5430   -0.6297   -0.9382 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1013    1.4992   -1.4632 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7452    2.1719    0.2383 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0320    0.7819   -1.8357 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1539    2.5591   -1.3399 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2389    1.8370    1.0009 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4676    1.7613    0.9938 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2842    2.8190   -0.9669 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2360    0.3654   -2.4474 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5742    1.5439   -1.9923 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5326    2.9088   -0.8642 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6656    1.5617    1.0807 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6515    2.0635   -0.0255 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4213    0.8337   -1.2860 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.9655   -0.2332    0.0728 H   0  0  0  0  0  0  0  0  0  0  0  0
   -8.2677    1.5048    1.3913 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.5898   -2.0335    0.5325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.8637   -1.3768    2.1450 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4829   -1.9660    1.5589 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7884   -0.3072    2.3131 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4342   -2.2573   -0.7359 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7163   -1.0631   -1.0253 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2112   -0.8420   -1.9058 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6241   -0.3876    1.6175 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3472   -1.6423   -1.1367 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4375   -2.3287    0.4802 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2231   -2.3070    0.5039 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7280   -2.0521   -1.8576 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9473   -0.1102    2.6271 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6601    0.5139    2.5065 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4313   -1.2344    2.4611 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  1  0
  6  9  1  0
  9 10  1  0
  2 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 16 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 21 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 25 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 29 31  1  0
 31 32  1  0
 31 11  1  0
 31 14  1  0
 27 15  1  0
 25 19  1  0
  1 33  1  0
  1 34  1  0
  1 35  1  0
  2 36  1  0
  3 37  1  0
  3 38  1  0
  4 39  1  0
  4 40  1  0
  5 41  1  0
  5 42  1  0
  6 43  1  0
  7 44  1  0
  7 45  1  0
  8 46  1  0
  9 47  1  0
  9 48  1  0
 10 49  1  0
 11 50  1  0
 12 51  1  0
 12 52  1  0
 13 53  1  0
 13 54  1  0
 14 55  1  0
 15 56  1  0
 16 57  1  0
 17 58  1  0
 18 59  1  0
 18 60  1  0
 19 61  1  0
 20 62  1  0
 20 63  1  0
 21 64  1  0
 22 65  1  0
 23 66  1  0
 23 67  1  0
 24 68  1  0
 24 69  1  0
 26 70  1  0
 26 71  1  0
 26 72  1  0
 27 73  1  0
 28 74  1  0
 28 75  1  0
 29 76  1  0
 30 77  1  0
 32 78  1  0
 32 79  1  0
 32 80  1  0
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
5a-Cyprinol	Generator
5Α-cyprinol	Generator

Chemical Formula

C₂₇H₄₈O₅

Average Molecular Weight

452.676

Monoisotopic Molecular Weight

452.350174646

IUPAC Name

14-[7-hydroxy-6-(hydroxymethyl)heptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,9,16-triol

Traditional Name

14-[7-hydroxy-6-(hydroxymethyl)heptan-2-yl]-2,15-dimethyltetracyclo[8.7.0.0²,⁷.0¹¹,¹⁵]heptadecane-5,9,16-triol

CAS Registry Number

Not Available

SMILES

CC(CCCC(CO)CO)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C

InChI Identifier

InChI=1S/C27H48O5/c1-16(5-4-6-17(14-28)15-29)20-7-8-21-25-22(13-24(32)27(20,21)3)26(2)10-9-19(30)11-18(26)12-23(25)31/h16-25,28-32H,4-15H2,1-3H3

InChI Key

JNMALBXXJSWZQY-UHFFFAOYSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as tetrahydroxy bile acids, alcohols and derivatives. These are prenol lipids structurally characterized by a bile acid or alcohol which bears four hydroxyl groups.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Steroids and steroid derivatives

Sub Class

Bile acids, alcohols and derivatives

Direct Parent

Tetrahydroxy bile acids, alcohols and derivatives

Alternative Parents

Substituents

26-hydroxysteroid
Tetrahydroxy bile acid, alcohol, or derivatives
3-hydroxysteroid
12-hydroxysteroid
7-hydroxysteroid
Hydroxysteroid
Fatty alcohol
Fatty acyl
Cyclic alcohol
Secondary alcohol
Polyol
Organooxygen compound
Hydrocarbon derivative
Organic oxygen compound
Alcohol
Primary alcohol
Aliphatic homopolycyclic compound

Molecular Framework

Aliphatic homopolycyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Not Available

Disposition

Biological location

Non-excretory biofluid

Biofluid or Excreta

Blood (PMID: 31557052)

Source

Exogenous

Exogenous (PMID: 31557052)

Process

Not Available

Role

Not Available

Physical Properties

State

Not Available

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	2.58	ALOGPS
logP	2.23	ChemAxon
logS	-4	ALOGPS
pKa (Strongest Acidic)	15.1	ChemAxon
pKa (Strongest Basic)	-0.16	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	5	ChemAxon
Hydrogen Donor Count	5	ChemAxon
Polar Surface Area	101.15 Å²	ChemAxon
Rotatable Bond Count	7	ChemAxon
Refractivity	126.56 m³·mol⁻¹	ChemAxon
Polarizability	53.93 Å³	ChemAxon
Number of Rings	4	ChemAxon
Bioavailability	Yes	ChemAxon
Rule of Five	Yes	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	Yes	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M-2H]-	241.798	30932474
DeepCCS	[M+Na]+	217.228	30932474
AllCCS	[M+H]+	213.9	32859911
AllCCS	[M+H-H2O]+	212.1	32859911
AllCCS	[M+NH4]+	215.5	32859911
AllCCS	[M+Na]+	215.9	32859911
AllCCS	[M-H]-	208.3	32859911
AllCCS	[M+Na-2H]-	210.6	32859911
AllCCS	[M+HCOO]-	213.2	32859911

Predicted Retention Times

Underivatized

Chromatographic Method	Retention Time	Reference
Predicted by Siyang on May 30, 2022	12.9791 minutes	33406817
Predicted by Siyang using ReTip algorithm on June 8, 2022	3.14 minutes	32390414
Fem_Long = Waters ACQUITY UPLC HSS T3 C18 with Water:MeOH and 0.1% Formic Acid	2749.4 seconds	40023050
Fem_Lipids = Ascentis Express C18 with (60:40 water:ACN):(90:10 IPA:ACN) and 10mM NH4COOH + 0.1% Formic Acid	166.9 seconds	40023050
Life_Old = Waters ACQUITY UPLC BEH C18 with Water:(20:80 acetone:ACN) and 0.1% Formic Acid	198.0 seconds	40023050
Life_New = RP Waters ACQUITY UPLC HSS T3 C18 with Water:(30:70 MeOH:ACN) and 0.1% Formic Acid	171.5 seconds	40023050
RIKEN = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	385.6 seconds	40023050
Eawag_XBridgeC18 = XBridge C18 3.5u 2.1x50 mm with Water:MeOH and 0.1% Formic Acid	548.9 seconds	40023050
BfG_NTS_RP1 =Agilent Zorbax Eclipse Plus C18 (2.1 mm x 150 mm, 3.5 um) with Water:ACN and 0.1% Formic Acid	535.2 seconds	40023050
HILIC_BDD_2 = Merck SeQuant ZIC-HILIC with ACN(0.1% formic acid):water(16 mM ammonium formate)	215.6 seconds	40023050
UniToyama_Atlantis = RP Waters Atlantis T3 (2.1 x 150 mm, 5 um) with ACN:Water and 0.1% Formic Acid	940.9 seconds	40023050
BDD_C18 = Hypersil Gold 1.9µm C18 with Water:ACN and 0.1% Formic Acid	508.9 seconds	40023050
UFZ_Phenomenex = Kinetex Core-Shell C18 2.6 um, 3.0 x 100 mm, Phenomenex with Water:MeOH and 0.1% Formic Acid	1581.5 seconds	40023050
SNU_RIKEN_POS = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	317.6 seconds	40023050
RPMMFDA = Waters ACQUITY UPLC BEH C18 with Water:ACN and 0.1% Formic Acid	421.8 seconds	40023050
MTBLS87 = Merck SeQuant ZIC-pHILIC column with ACN:Water and :ammonium carbonate	289.2 seconds	40023050
KI_GIAR_zic_HILIC_pH2_7 = Merck SeQuant ZIC-HILIC with ACN:Water and 0.1% FA	198.4 seconds	40023050
Meister zic-pHILIC pH9.3 = Merck SeQuant ZIC-pHILIC column with ACN:Water 5mM NH4Ac pH9.3 and 5mM ammonium acetate in water	132.7 seconds	40023050

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
5alpha-Cyprinol	CC(CCCC(CO)CO)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C	2910.6	Standard polar	33892256
5alpha-Cyprinol	CC(CCCC(CO)CO)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C	1673.4	Standard non polar	33892256
5alpha-Cyprinol	CC(CCCC(CO)CO)C1CCC2C3C(O)CC4CC(O)CCC4(C)C3CC(O)C12C	4015.4	Semi standard non polar	33892256

Spectra

GC-MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (Non-derivatized) - 70eV, Positive	splash10-0a4r-0433900000-633a5550c2da064cb897	2021-09-23	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (Non-derivatized) - 70eV, Positive	Not Available	2021-10-12	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_1_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_1_2) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_1_3) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_1_4) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_2) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_3) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_4) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_5) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_6) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_2_7) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_2) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_3) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_4) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_5) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_6) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_3_7) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_4_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_4_2) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_4_3) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_4_4) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum
Predicted GC-MS	Predicted GC-MS Spectrum - 5alpha-Cyprinol GC-MS (TMS_5_1) - 70eV, Positive	Not Available	2021-11-03	Wishart Lab	View Spectrum

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5alpha-Cyprinol 10V, Positive-QTOF	splash10-0udi-0000900000-a50ba834af7ca074263a	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5alpha-Cyprinol 20V, Positive-QTOF	splash10-1000-2244900000-2c84830f45ec7c6abb07	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5alpha-Cyprinol 40V, Positive-QTOF	splash10-0a6r-8931000000-0de17f3c0dc22816675d	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5alpha-Cyprinol 10V, Negative-QTOF	splash10-0udi-0000900000-18456ca3940930da399f	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5alpha-Cyprinol 20V, Negative-QTOF	splash10-0udi-0000900000-a5ae1382296b3f6ec884	2021-10-12	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - 5alpha-Cyprinol 40V, Negative-QTOF	splash10-0f76-0009500000-690bd16a9712e48cd490	2021-10-12	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Blood

Tissue Locations

Not Available

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected but not Quantified	Not Quantified	Not Specified	Not Specified	Normal	31557052	details

Abnormal Concentrations

Not Available

Associated Disorders and Diseases

Disease References

None

Associated OMIM IDs

None

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

21237061

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

71436760

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Barupal DK, Fiehn O: Generating the Blood Exposome Database Using a Comprehensive Text Mining and Database Fusion Approach. Environ Health Perspect. 2019 Sep;127(9):97008. doi: 10.1289/EHP4713. Epub 2019 Sep 26. [PubMed:31557052 ]

Showing metabocard for 5alpha-Cyprinol (HMDB0247015)

MOL for HMDB0247015 (5alpha-Cyprinol)

3D MOL for HMDB0247015 (5alpha-Cyprinol)

3D SDF for HMDB0247015 (5alpha-Cyprinol)

3D-SDF for HMDB0247015 (5alpha-Cyprinol)

PDB for HMDB0247015 (5alpha-Cyprinol)

3D PDB for HMDB0247015 (5alpha-Cyprinol)

SMILES for HMDB0247015 (5alpha-Cyprinol)

INCHI for HMDB0247015 (5alpha-Cyprinol)

Structure for HMDB0247015 (5alpha-Cyprinol)

3D Structure for HMDB0247015 (5alpha-Cyprinol)

Predicted Collision Cross Sections

Predicted Retention Times

Underivatized

Predicted Kovats Retention Indices

Underivatized

GC-MS Spectra

MS/MS Spectra